BGIOSGA029436

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029436| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029436, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA029436

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029436, complete gene.

LocusTag

OSJNBB0034B12.14

Ensembl Transcript ID

BGIOSGA029436-TA

Ensembl Protein ID

BGIOSGA029436-PA

Length

4409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18898566..18902974

Sequence Coding Region

18902900..18902974,18902307..18902492,18901317..18901520,18900835..18900958,18900296..18900396
,18899623..18899697,18899443..18899541,18898566..18898712

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18898566..18902974 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18898566..18902974 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGATGCTGTCCAAGGCGTGCTCGCTCGTGGCCTCCTCCCTCCCGCGGTGCTCATCCTCCGCTGCCCCCACGATCAGAGGGCAGCCGTCGTTGCTGCCAAGCGTGCGCAAGGAATGGCTTGGCAAGCCGCTGCTGTACGGAATCGGCACGCTGCTCGTCATGCCTCTGAGGACGCTGCACGGGGTGGGACGGATGTTTGGCGCTGGGCGGTTCCTCTGCAACATGACCAGCGTCTCGTCGTCGCTGCAAATTGAGCTCGTACCCTGCCTTCAAGATAACTATGCTTACATCCTACATGATGTCGATACTGGAACAGTTGGAGTTGTGGACCCTTCTGAAGCAACGCCAATCATAAATGCACTAGAAAAAAGAAACCAGAACTTGACCTACATACTGAACACCCATCATCACTATGACCATACTGGTGGCAACTTGGAACTGAAGGCAAAATATGGTGCAAAGGTGATTGGTTCTGCAAAGGATAGGGATAGAATTCCAGGCATTGACATAACTCTTAGTGAGGGTGACACATGGATGTTTGCTGGTCATCAAGTTCTTGTAATGGAAACTCCTGGTCATACATCAGGTCATGTGTGCTACCACTTCCCTGGATCTGGAGCAATATTTACAGGGGACACATTGTTTAGTTTGTCATGTGGAAAGCTTTTTGAAGGGACTCCACAACAGATGTACTCTTCACTCCAGAAAATTATAGCACTTCCGGATGAGACAAGAGTGTATTGCGGACATGAATATACATTGAGCAATTCAAAGTTTGCCTTGAGCATAGAACCAGGAAATAAAGACTTACAGGAATACGCTGCAAATGCCGCTGATCTCCGCAAGAGGAATACACCCACGGTGCCAACAACAATTGGGAGAGAGAAGCAGTGCAATCCTTTTCTGAGGACCTCAAGTCCAGAGATAAAGAATACCCTGTCCATCCCAGACCATTTTGATGATGCACGCGTTCTTGAAGTTGTTCGACGAGCGAAGGATAACTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MRMLSKACSLVASSLPRCSSSAAPTIRGQPSLLPSVRKEWLGKPLLYGIGTLLVMPLRTLHGVGRMFGAGRFLCNMTSVSSSLQIELVPCLQDNYAYILHDVDTGTVGVVDPSEATPIINALEKRNQNLTYILNTHHHYDHTGGNLELKAKYGAKVIGSAKDRDRIPGIDITLSEGDTWMFAGHQVLVMETPGHTSGHVCYHFPGSGAIFTGDTLFSLSCGKLFEGTPQQMYSSLQKIIALPDETRVYCGHEYTLSNSKFALSIEPGNKDLQEYAANAADLRKRNTPTVPTTIGREKQCNPFLRTSSPEIKNTLSIPDHFDDARVLEVVRRAKDNF</aaseq>

Gene Sequence

<dnaseqindica>1..75#483..668#1455..1658#2017..2140#2579..2679#3278..3352#3434..3532#4263..4409#ATGCGGATGCTGTCCAAGGCGTGCTCGCTCGTGGCCTCCTCCCTCCCGCGGTGCTCATCCTCCGCTGCCCCCACGGTCGGGCTCCCTTCCCTCTCCCCCTCCCGCTCCGTTTCCGTTTGATGGATTGTTGTTGGGCGATCTCCGGTAGGGATGGTGTTCGGGGGCTTGGATCTGGGGGGATTGGGTCGGAGGGGCGCGTCGCTGCGGGGGGTGTGCGTGCCTCCTCCGCTGTGAACGAAACCGTCGCGTTTTTGGCTTCGGTCCCTCGCTTGCCGGGTTTTTGCCGATATCGGCGACGTGCCTGATTATTCCCTAGTGTGTTCGATTCTAGTCAGTTTTGCTGGATTACTGGAAGAATTTTTTGTATGGAGTTCCGCGGTATAGAATTGGGTATTTGATTGCTGAATTAGTTGTGTGATGATAGAGTTCTATGAATTCAGAGTTGGGATGGCTGACGATTGTTTGTTGTGTTGGGTTTGCAGATCAGAGGGCAGCCGTCGTTGCTGCCAAGCGTGCGCAAGGAATGGCTTGGCAAGCCGCTGCTGTACGGAATCGGCACGCTGCTCGTCATGCCTCTGAGGACGCTGCACGGGGTGGGACGGATGTTTGGCGCTGGGCGGTTCCTCTGCAACATGACCAGCGTCTCGTCGTCGCTGCAAATTGAGCTCGTGAGTATCCTGAGATATTTTATTATGTTGTTATTCTCCCTGTCAGCGAATTGTTATTGCAACTTGATTGGGCTTGTGGATTGTGAGTATCATCCTGAGAGTTGATATTATTGTTATTGCAATCAATTAATTGTTATGATACTTCGTGCTGCACATGTTTGCTCATCAGTTGAAAAGAAAATCTGATTGCTGCATAAGCATAAAAGATATTTGGAGGGCAGGATTCGATTCAACAGACAACACTAATTTTTTCCACAGCGACTAATCAAACCTAGATGTGAAGAATTTGTTGCAACTGGATGGTGTTGCTGGTGGCATTGGTTTTGGGATAAAAACTTTGGGGCGTTCTCAATAAGAAAGTGGCCATGCTCACATAAAGAAGCTTCCCTAATTGTTCTTCCACCTTTTTGTTGTTGCTTTGTTCTGTTTTTTTTTTCTTTCTGCTCTCGATTCTTCTGCATGAATGTGATATATGTTCAACACATTAAATTGTATCATTTTCTGTGACCTATCAAGCATACTTTAGTCGTCTATATGATTTTGCACTCTTTTTTACTTTATTCCTGAACACTTGTTCATAGTTTCTTCCAGACATACTGGTTCTTAAGCGTAGCATCCCAACTCAAAACACTGGATCAGATCTAACTTTATTTTGGATAGACAGACCCTCTCTATCACCAACCCTCCTTATGCTTTCCTTGCTTCGCATAAAAGGGTTATTGGGGATAGCTACATTGGAATTATCTATAGTATTTGTTGCCAACAATGTTTATGCTTCTTGTGTAGGTACCCTGCCTTCAAGATAACTATGCTTACATCCTACATGATGTCGATACTGGAACAGTTGGAGTTGTGGACCCTTCTGAAGCAACGCCAATCATAAATGCACTAGAAAAAAGAAACCAGAACTTGACCTACATACTGAACACCCATCATCACTATGACCATACTGGTGGCAACTTGGAACTGAAGGCAAAATATGGTGCAAAGGTATGCACATAGGTTGCCTCTCTTATTTTCGTTTGTTCCATTGTTTGTAGCACTAAATTGTGTATTGTTATGAGTTCTTATGGACAATGAGTAATATGGTAGCAATAAACAGATCAGCATTTTTCAAGGTTAAATTTGATGTTATAAATTTAGTTTATAAATCTGCTTACAGTATCAAATTTAAGATGTGACGAGTTTCTATACGAATAATAAAAAGGACCTATTGATAGTTGACACAGTTTGTTTTCCAGCATGTCATTATCTATCCACTGGGTGCTCCTACCACCTGTAACACCAAAGTTTATGAGTAAATGTGGTTTTGATATTTTTGGTTTATGAATTTTGTTTGTTTAACTAGGTGATTGGTTCTGCAAAGGATAGGGATAGAATTCCAGGCATTGACATAACTCTTAGTGAGGGTGACACATGGATGTTTGCTGGTCATCAAGTTCTTGTAATGGAAACTCCTGGTCATACATCAGGTGCGTGCTTGCAAGTTTCTTATTAGATTTATCTTCTTTCTTTTTCTTCATTATCGAATTATGCCAAGTCTGAATGTGTATGTACTAGATTTCCTTAAACATGAGAGATCACATTTTTTGCACTTGGTGATTACTGGAAGTATTCAAGCTAAGAGTGCCTCTAAATTTTTAACCTGAAGTTCAAATTGCTTTCTTTGCCACCTTCCCCACAAGCACATGTGATAGTTTCCTGTGGGCGCTCATGGCCAGTTGGCCACATGTACATGTGTTAAACTCAAGTAGTGGCACACCCTTATATGAAGCATATTTGAAGGTGTACCATTTTTTTGGGAGAAGGTTATATTGCGATTTTTGCATCTTATGTTTATTTACAAGATATGTCAATACTATCTTTTTTTTAAAAAAAAAAATCACCAATTTCCCTTCTACTTATATTAGGTCATGTGTGCTACCACTTCCCTGGATCTGGAGCAATATTTACAGGGGACACATTGTTTAGTTTGTCATGTGGAAAGCTTTTTGAAGGGACTCCACAACAGGTTCTTTTTAATTTTTACAGAGTCATCTTCATGTGCACTTTATGGAAGTAATTAAACACCAAATGCTATGTTTTGCTTGATTCCATGTACTTGTTCATTCCCTGTTAGATCTTTGAATGAAACTGGTTCCCTGCCAATTTTACCTCAGCAAAGATGAATCTGATGGCAAGGCCTTAAGCAATTTGTTGAGACCATTAAGATCCTTTTGCCACGCCATAGTTATCAATATAATCTAGATTACTTGTAAACTAGACTAGTGATCTATTAGCCATGATAATTTAAGATATATAACAGAAGAGGCTTTAAACGTTCTCTATAAATAATCAGATGAACTGGAAGTTCTTGCTACATGGATTATCAAACCTTCATCTATTTGTACATCAAACAGCGGATGGGATTAAACAAACTGCTAGCACCTTAGATTAGTTCACTTAGTAACCAGAGATGCAGAAAAGGTAGAAGACTGTTAATTTGTGGTATTTCTGTTGGTCATCAATAGCTTCTTTTTATACAAGTTGGTTAAGTATGTAATGCATTTCCTTGTAACTATTATTGAGACCTGTGCATAATTCCTCTTTTTTTCAAATTTGTGCTGCAGATGTACTCTTCACTCCAGAAAATTATAGCACTTCCGGATGAGACAAGAGTGTATTGCGGACATGAATATACATTGGTGAATATCCAACGTTCATTTTCAATTCCACAAATAAATCTTCATTGACCTGTTATTTATGCTTCAAGTATCTATCCGCAGAGCAATTCAAAGTTTGCCTTGAGCATAGAACCAGGAAATAAAGACTTACAGGAATACGCTGCAAATGCCGCTGATCTCCGCAAGAGGAATACACCCACGGTATTAGTGCTATACAAACCATACATATTCATGGTTTTCTTGACAATCCAATTCTATTACACATTATTATATGATGTTTCTTGCTTTTACTTCTAAACTTTTTCTGAGAGAAGCCAGCTCATTTGGTATTTTGGTGCATAGATATTTAGGCGCAATTGTTTGTTTGGAAGTTCATGCATCTGAATTTATTGACAACCCTATCATGTTAATGATAGTATTCTGTCTTAACCTCTCAGCCCCTAAGATGTCTTATGTTGAGCTAGAAATAAGTCAGGATAACATACTCCGTATCTTGATGTGAAATAAAGGTTGTATCTTGCCAGGAATTGGCACTAGAAGGTCAAATCATGTTACAATTGAAAATGATGGGAAGGTTTTATAGCAACTTTAAGGAACTACGTTTTGTTGCTGTGCACTATCTGAAGTGCTTTTGGTTGTTTAAGAACAAAATTAACTATTGATTTTGGTGTAAAATGTTTCCCACATTATTTGAAAGAATACCAACTATACTTAAACATCACTGCAAGACTAGAATGAGATGGAAAAAGGGTTCAATCTAGTGCCAATAGCTCATTCTCTTCATGAAAGCAACATATGACCAATTCTAGATAGTATTAACATAAAAAGCCAAGCTATGTGGGGTTGTCAATCACAACTGCAGATTGCATGATAGTGGCTTGATTGGGATTATTTAACTTGTTTTTTTTTTTTTTGGCTTCATGTTCGCCAGGTGCCAACAACAATTGGGAGAGAGAAGCAGTGCAATCCTTTTCTGAGGACCTCAAGTCCAGAGATAAAGAATACCCTGTCCATCCCAGACCATTTTGATGATGCACGCGTTCTTGAAGTTGTTCGACGAGCGAAGGATAACTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029436