BGIOSGA029452

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029452| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029452, complete gene.| tag = OsI_320...")
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Gene Name

BGIOSGA029452

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029452, complete gene.

LocusTag

OsI_32015

Ensembl Transcript ID

BGIOSGA029452-TA

Ensembl Protein ID

BGIOSGA029452-PA

Length

5962

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18686752..18692713

Sequence Coding Region

18692564..18692713,18692259..18692322,18691885..18691943,18691711..18691786,18691563..18691634
,18691389..18691476,18690965..18691220,18690711..18690826,18690311..18690525
,18690140..18690165,18689937..18690030,18689736..18689838,18689406..18689528
,18686752..18687307

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18686752..18692713 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18686752..18692713 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGGGGCACGAGCTCTCGTGCCCTCGCCATTCATCGTCGTCGTCTTCCTCCTGCTCGCCGCCGCGGCGAGAGACGCTTCCGCGCTCACCCGGCATGACTTCCCCGAGGGCTTCGTCTTCGGCGCAGGCACCTCCGCTTTCCAGGTGGAAGGGGCAGCTGCAGAGGATGGGAGGAAGCCTAGCATCTGGGATACTTTCACCCATCAAGGGTACTCGCCTGGCGGTGCCATTGCAGATGTCTCAGCAGATCAATATCACCTTTACAAGGAGGATGTAAAGCTTATGTATGACATGGGCCTGGATGCGTACAGATTCTCCATTGCTTGGCCTCGTCTTATTCCAGATGGAAGAGGAGAGATCAACCCCAAGGGCTTGGAATACTACAACAATCTGATAGACGAATTGATAATGCACGGAATACAACCTCATGTCACCATCTACCACTTTGATCTCCCTCAGGCCCTTCAGGATGAGTACGGTGGAATACTCAGCCCCAGATTCATAGAAGATTACACGGCTTATGCCGAGGTTTGCTTCAAGAACTTCGGTGACAGGGTGAAGCACTGGGTGACAGTGAATGAGCCGAACATAGAGCCCATCGGCGGCTACGACGCCGGCGTTCAGCCGCCACGGCGGTGCTCCTACCCCTTCGGCACCAACTGCACCGGCGGCGACTCCTCGACGGAGCCGTACATCGTGGCTCACCACCTGCTGCTTGCTCATGCCTCGGCCGTGTCCATCTACAGACGGAAGTATCAGGCAATTCAAGGAGGTCAGATAGGGATCACTCTGCTGGGCTGGTGGTATGAGCCCTACACCGACGCGGTGGCAGATGCAGCTGCTGCAATCAGGATGAATGAATTCCATATTGGATGGTTTATGAATCCTCTGGTGCATGGAGACTACCCTCCGGTAATGAGGAGCCGCGTAGGCGCTCGGTTGCCATCCATAACGGCGTCCGATTCGGAGAAAATACGGGGATCGTTCGACTTCATCGGCATCAACCATTACTTCGTTATCTTTGTGCAATCCAGCGACGCAAATCATGACCAGAAACTAAGGGACTACTACGTTGATGCAGGTGTTCAAGAGAATGGTGGAGGAGGATTCGACAAGGAGCACTATCAGCTTCATCCCTGGGCTCTTGGCAAGATGCTACATCACCTGAAGCTCAAGTATGGCAACCCCCCAGTCATGATCCACGAGAATGGCGACGCAGATTCACCGGAGACCCCGGGCAAGATCGACTACGACGACGACTTTAGATCGGATTTCTTGCAGAGCTACCTGGAAGTTCTGCACCTGTCCATACGGAACGGATCGAACACGCGGGGATACTTCGTGTGGTCATTGCTCGACGGGTTCGAGTTCCTCTCCGGCTACGGCAACCGCTTTGGCCTGTGCGGCGTCGACTTCACCGCGCCGGCGAGGACGAGGACTGCCTGCACACAGCCTACCGGTGGGGAGTGGTTGAGGCCTGAGTCGCCGCTTCCTCAGCAGGCTCCAACTTTGGTGGTTGATGGGCCCGACGGCGTCCTCTACGATGTGCCGATGGTTGTCCTTGACCTCGATGGCCGCCCGCTGGCGCACTCGCTTCCATCTTCTGTGGCAGACAACGCCGCTCTTCGCGCCTTCCTCACCAGCTGCTCTAGGCCTCTCCCTCCTGCGCTCCTCCCGCCGCCTTTGCCGCTGCCGCCTCTCACCGCCAAGGTGGTGGAGGTTGTGCCGAAGCGCAGTGAGCGTATCGCTGCTAAGATGGCACTTGAGGCGCTTGAGGGGCCGATCCATGCAGTGTCGCACGCCCAACGCAACCTGATGCGGAAGCTCGGCCTAGTTCCGAAGAGGGGCCCGGTCACGGCCGAGGCGGTCGCGGCTTACAACGCCCTCTTCTCCAAGCCACTTTCCCAGGAGCACATCATCGCGCTCTCCTCGCTCTTCTCCAGCTCCTTGCCCCCGGCCAAGGCTGCAGAGGCGTTGGTCGTGTGCGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAGARALVPSPFIVVVFLLLAAAARDASALTRHDFPEGFVFGAGTSAFQVEGAAAEDGRKPSIWDTFTHQGYSPGGAIADVSADQYHLYKEDVKLMYDMGLDAYRFSIAWPRLIPDGRGEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQDEYGGILSPRFIEDYTAYAEVCFKNFGDRVKHWVTVNEPNIEPIGGYDAGVQPPRRCSYPFGTNCTGGDSSTEPYIVAHHLLLAHASAVSIYRRKYQAIQGGQIGITLLGWWYEPYTDAVADAAAAIRMNEFHIGWFMNPLVHGDYPPVMRSRVGARLPSITASDSEKIRGSFDFIGINHYFVIFVQSSDANHDQKLRDYYVDAGVQENGGGGFDKEHYQLHPWALGKMLHHLKLKYGNPPVMIHENGDADSPETPGKIDYDDDFRSDFLQSYLEVLHLSIRNGSNTRGYFVWSLLDGFEFLSGYGNRFGLCGVDFTAPARTRTACTQPTGGEWLRPESPLPQQAPTLVVDGPDGVLYDVPMVVLDLDGRPLAHSLPSSVADNAALRAFLTSCSRPLPPALLPPPLPLPPLTAKVVEVVPKRSERIAAKMALEALEGPIHAVSHAQRNLMRKLGLVPKRGPVTAEAVAAYNALFSKPLSQEHIIALSSLFSSSLPPAKAAEALVVCG</aaseq>

Gene Sequence

<dnaseqindica>1..150#392..455#771..829#928..1003#1080..1151#1238..1325#1494..1749#1888..2003#2189..2403#2549..2574#2684..2777#2876..2978#3186..3308#5407..5962#ATGGCGGCCGGGGCACGAGCTCTCGTGCCCTCGCCATTCATCGTCGTCGTCTTCCTCCTGCTCGCCGCCGCGGCGAGAGACGCTTCCGCGCTCACCCGGCATGACTTCCCCGAGGGCTTCGTCTTCGGCGCAGGCACCTCCGCTTTCCAGGTGCCAAGTACTCCTAGATTAATTAGCCAGTTTCACCTCACTTTGTCAGATGAACTATGTTATTATTTGTGCAGACAGTGCATATGTCGATACGATATCCCTGAAATTTGGCAGGAATTTGTTGCATCGGATTTGGATTTCTGTTTAATTTCTGTATCGTTTCCTGTTTGTATGGCATGATCTTTGCTGTTCAAGATCTGAATTTGTCTGCAACTTTGTAACATAACAACACCTGGAGTAGGTGGAAGGGGCAGCTGCAGAGGATGGGAGGAAGCCTAGCATCTGGGATACTTTCACCCATCAAGGTCCAAACAGATACTTGAATCATATATTCTCCTCATGACTTATTTTTTTTCTAGATGTTCTTTATTTACGCATGGTTGCATTGTTCCAGAATGAATATGTCCATGATGATGGCAAGGTGTGTCATCTCATTGTGTGTATGTCGCTCAAATAGTTATGATGAAAAAAATTAAGAAGATGTATTAACATGTGATATATTACTCCACAAACATATAAGCTAAAATTAGAGTTCTTAATACATTGTACTACCTTGATGTAATTGGTTGAGTTTAATAAAACTTTTATTATATAATAGTAAAAATTAGTGTTGGTGACAGGGTACTCGCCTGGCGGTGCCATTGCAGATGTCTCAGCAGATCAATATCACCTTTACAAGGTCAGTGCTGCACTGTTGCAGTGATAAGTTCAGATATGACGCAAATATATATTACAAGAAGATCAATTTAATCTACCCTTTTTTTTCAATGATTTCAGGAGGATGTAAAGCTTATGTATGACATGGGCCTGGATGCGTACAGATTCTCCATTGCTTGGCCTCGTCTTATTCCAGGTAGACATAATCACATAAATAAGGTAGTATTGAATATCTTCAGAACATTTCTGACAGGGAGCTTCAATTGGATTAGATGGAAGAGGAGAGATCAACCCCAAGGGCTTGGAATACTACAACAATCTGATAGACGAATTGATAATGCACGGTAAACATTACATGATCCATGCAGCTCTATTCTTAATTACCAAAATCTTGATCAATCAAGACCCATCTTCTGCCATGTTTTGGCAGGAATACAACCTCATGTCACCATCTACCACTTTGATCTCCCTCAGGCCCTTCAGGATGAGTACGGTGGAATACTCAGCCCCAGATTCATGTAAGCACCCTGAGAAATCCACAAAATCCTGTGTGACAAACTGACAAGCTGAACATTTTCGGCTTTTCGCAACGCAAAGTGATCGAAATGGTGAAGAATTCAGGCAATTTCTCTTTGAGGGGATCATGCTGACAGCCTGACATGGTGTAATCTACCATATATTTTCAGAGAAGATTACACGGCTTATGCCGAGGTTTGCTTCAAGAACTTCGGTGACAGGGTGAAGCACTGGGTGACAGTGAATGAGCCGAACATAGAGCCCATCGGCGGCTACGACGCCGGCGTTCAGCCGCCACGGCGGTGCTCCTACCCCTTCGGCACCAACTGCACCGGCGGCGACTCCTCGACGGAGCCGTACATCGTGGCTCACCACCTGCTGCTTGCTCATGCCTCGGCCGTGTCCATCTACAGACGGAAGTATCAGGTCATATTAAATTCCATAACTAATTCCTACTGTTCACCATTATACAAAATACTTTTCATTATGCATTTGTGTTTCTTTCACGTGCCAAGATAAAATGGTCCCTGAAAATTGGATTTGGACATGGAAAGTTGGCAACAGGCAATTCAAGGAGGTCAGATAGGGATCACTCTGCTGGGCTGGTGGTATGAGCCCTACACCGACGCGGTGGCAGATGCAGCTGCTGCAATCAGGATGAATGAATTCCATATTGGATGGTTAGTTAGTACTTAAATTGCGGTAGTAACTACTTAAATTGTAGTCGAATACTACTGTCTCAAACTCAAAACGATGTTCATACTCAGATTTTTCAAACTCAAAACGATGTTCATACGAAAATACATTCAGTTTGGCTATTTGTCAGTCTCCTGATTTTACAATGTACCCCTCTGAAATAATGCAGGTTTATGAATCCTCTGGTGCATGGAGACTACCCTCCGGTAATGAGGAGCCGCGTAGGCGCTCGGTTGCCATCCATAACGGCGTCCGATTCGGAGAAAATACGGGGATCGTTCGACTTCATCGGCATCAACCATTACTTCGTTATCTTTGTGCAATCCAGCGACGCAAATCATGACCAGAAACTAAGGGACTACTACGTTGATGCAGGTGTTCAAGGTAAGGATCTCTGAACAACCACAGGCCAGATGTTCCCAAGCAAATTAATCTTGCATTGCCATGGTTTTCTACAGTCAACTGCATTAGTTTTTTGAGTTCCATATATGAGATTAAACCGAGCTGACTTGCTGCTCACCTGGTGCAGAGAATGGTGGAGGAGGATTCGACAAGGTAATATATAGATAATCATGCTGCAGTGGAGCAGAGTTGTTTCAGAAAATTTTTCAATGCATCAGAAATTCAGTCTTGACAGTTGCTTGAATGCTCCCTCCCTTTACAGGAGCACTATCAGCTTCATCCCTGGGCTCTTGGCAAGATGCTACATCACCTGAAGCTCAAGTATGGCAACCCCCCAGTCATGATCCACGAGAATGGTAGGTCTGAATTATCGAGCTATTTCTGAACATACGTAATGTAAATCTGATCAATGTGATGTGAATATGATTTTATTTTTTCCCTCTCGATGGCTCAGGCGACGCAGATTCACCGGAGACCCCGGGCAAGATCGACTACGACGACGACTTTAGATCGGATTTCTTGCAGAGCTACCTGGAAGTTCTGCACCTGTCCATACGGTGTGCTCACTCTCCCTGCTTGTTACTCTCCATTCCATATTGTAAGGTATTTCAGTTTTTATTCTAAGTTAAACTTCTTCAAATATGGCTAAATTTGAAGAAAAATAAACTAATTTCTATAACGTCAAATTAATGTCCAGTCTAGAAATCTTTGGAACTTCAGAGAGAGACACTCTAGTTAATTTAGTTTCTTGGTTCGCGATGCAGGAACGGATCGAACACGCGGGGATACTTCGTGTGGTCATTGCTCGACGGGTTCGAGTTCCTCTCCGGCTACGGCAACCGCTTTGGCCTGTGCGGCGTCGACTTCACCGCGCCGGCGAGGACGAGGTACGTCAGGAGCTCGGCACGGTGGTACTCCGACTTCCTCAACGGCGGCGAGCTCCGGCCGGTGAAACCCTTCGAATCGGGAAGATATTAATCTGGAGACGTAGACTAGAAGATGAGCAACTTACTACTCTCTCCGTCCCAAAAAAAGCCAATCCTCTCCTAGTAGAACGATTCTGGATTATACTAGGAGGGGTCATATTTTTAGATTGGGTTTTTTTTGACAGAGAAAGTATGCAGTTAATATTTTTTTTTCTTTTTACTATATACGAAAGTGGAAGGTTCCAACCCTCCACGCAATAGCCCAAAATAATAAAAGCGACATCGTCTTCTAGAAGGAGGCCAGAGAATGTGTATGGATGTAAATGGAAAAATCGGACAGAATCACGAACAGAGGAGAACAGAAACACCTGGAATTCAGAAAAAATGGTGAGAGTTGGCGACCAATTTGAGTTGCTGTACTCCTTTGTGCCACCTGCATTACCCTGTCGCTGTCGTTATCTTTCCATCAAAATGTTCATGTACGGACGTGCACAGGGCACGTAGGTGTCTGTCTACTGCATGCCTGCAATTGATGACCCGGGGCCCCACTCGTGTCGCCCCACGTCGACTTGTTAGGCGCAGGTTTAACTTTGTTTTGTGGGATAATTAGTTTGACTGTGATTTGGAGAGCAATTATTATGTTTGAAGTTCTTTAGTGGAGTATATACCTACTTGAGTGACGTATCACGTATCTAGCAAAAGTTTGAACCAAACTTAACCTTAAGTTCTTTAGGGATTAGGTCTGACCTTTTGCGCTTACCTGCGTATTGATACTGCTCCCTCCGTCCAGAATGTAAGAAGTTTTAGTGTTAGACACGGTTAATAAGAAAGTAGATAGAAGTTAGTGGTGGAGAGTTGTGATTGGATGAGTAGTGGAGTTATGTGGAAAAAGTGAATGATGGAGGGTTGTGATTGGTTGGGAAGAGAATGTTGGTGGAGAAATTGATATATTTTGGGACAAATCCTGATAGCTAAAAGTTGCTCTATTTTAGAACGAAGAGAGTATATAATAGCATATCGGTGTCGCTATTATCAGTGCCGGTTCAATAAAACCCAACATTAATGATGGTTTTCCGCCCTAACACTCTAGCACTACGCAGAGGTAACACCTAACACTAATAAGAAGACATCAGCGTCGGGTCATATACAAACCAATATTGGTTATTCTACATATAAACCAATATACCAGTTTATAAGAATACCCGACATTGATCGGTTAATCATCAGTGTCGGTTCAAGTCGATTAGAGTGGGATGGACTAGCCTGTTGATGGAAAAAGTCATCAATGTCGGGTCTTAATAAGCATCCATGTCGGTTTGGGATATAAACTTAACTTTTTTATACAAATTCGAATTATGATAAGGTTTATATGAAAACTGTAGCTCTTGACAATATCTATGATTTTCTAGTTAATTTTTTTTAATACTTTTAGATACTCAAATCCATTATTCAAATCTCAATTAGAAAGGCTAAAAATGAATATATCCATTTGCTAATAGAATTGATTGTTGGAATCACTCCCTCTCTTATGTATTGTTTATCGCAAACACTCACGTATTTTTCACTTGCATCACACACACACACACACACGAATGAACAGAGTGCACAAGCTAGAAAGCCTTTTGGTTTTTTTTTTTTTTTGAGAACAGAAAGCCTTTTGGTTGATGCAGCCAACTATCTCACATCGGTTTTTTTGTTCATAGCCCTGTTTAAGATCCCACACCAAAATTTTTCACCATGTCATATCGAACATTTAAACACCTACATAAAGTATTAAATATAGGCTTAAAAAATAACTAATTGCACAGATTGCAACTAATTTGCGAGATAAATCTTTTAAGCCTAATTGCTCCATGATTTGATAATGTGGTGCTACAGTAAACATTTGCTAACGACGGATTAATTAGGCTTAATAAATTCATCTTGTGGTTTACTAATGGATTTTGTAATTAGTTTTTTTATTAGTGCCCGAACACCCTATGCGACACTCTAAATAATACCCGATTTAACATGCTAAAACTTTATATGCGAACACCCTATGCGGCACTTCTCTGCCAAGGACTGCCTGCACACAGCCTACCGGTGGGGAGTGGTTGAGGCCTGAGTCGCCGCTTCCTCAGCAGGCTCCAACTTTGGTGGTTGATGGGCCCGACGGCGTCCTCTACGATGTGCCGATGGTTGTCCTTGACCTCGATGGCCGCCCGCTGGCGCACTCGCTTCCATCTTCTGTGGCAGACAACGCCGCTCTTCGCGCCTTCCTCACCAGCTGCTCTAGGCCTCTCCCTCCTGCGCTCCTCCCGCCGCCTTTGCCGCTGCCGCCTCTCACCGCCAAGGTGGTGGAGGTTGTGCCGAAGCGCAGTGAGCGTATCGCTGCTAAGATGGCACTTGAGGCGCTTGAGGGGCCGATCCATGCAGTGTCGCACGCCCAACGCAACCTGATGCGGAAGCTCGGCCTAGTTCCGAAGAGGGGCCCGGTCACGGCCGAGGCGGTCGCGGCTTACAACGCCCTCTTCTCCAAGCCACTTTCCCAGGAGCACATCATCGCGCTCTCCTCGCTCTTCTCCAGCTCCTTGCCCCCGGCCAAGGCTGCAGAGGCGTTGGTCGTGTGCGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029452