Os10g0536400

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0536400| Description = Conserved hypothetical protein| Version = NM_001071704.1 GI:115483151 GeneID:4349238| Length = 5703 bp| Definition ...")
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Gene Name

Os10g0536400

Description

Conserved hypothetical protein

Version

NM_001071704.1 GI:115483151 GeneID:4349238

Length

5703 bp

Definition

Oryza sativa Japonica Group Os10g0536400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21341688..21347390

Sequence Coding Region

21341803..21342015,21342112..21342359,21345861..21345912,21347015..21347038

Expression

GEO Profiles:Os10g0536400

Genome Context

<gbrowseImage1> name=NC_008403:21341688..21347390 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21341688..21347390 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggaggcggagcagcagcaccagctgctgtcgacggccgtgcacgacacgatgccggggaagtacgtccgcccggagtcgcagcgcccgcgcctcgacctcgtcgtctccgacgcccgcatccccgtcgtcgacctcgcctcccccgaccgcgccgccgtcgtctccgccgtcggcgacgcctgccgcacccacggcttcttccaggtggtgaaccatggcatcgatgcggcgctgatcgcgtcggtcatggaggtgggccgcgagttcttccggctgccggcggaggagaaggcgaagctctactccgacgatccggccaagaagatacggctgtcgacgagcttcaacgtgcgcaaggagacggtgcacaactggcgcgattacctccgcctccactgctatcctctccaccagttcgtccccgactggccctccaatccgccctccttcaaggagatcatcggcacgtactgcacagaggtaagagagctagggttcaggctatacgagtcgacattaaaaccgtga</cdnaseq>

Protein Sequence

<aaseq>MAAEAEQQHQLLSTAVHDTMPGKYVRPESQRPRLDLVVSDARIP VVDLASPDRAAVVSAVGDACRTHGFFQVVNHGIDAALIASVMEVGREFFRLPAEEKAK LYSDDPAKKIRLSTSFNVRKETVHNWRDYLRLHCYPLHQFVPDWPSNPPSFKEIIGTY CTEVRELGFRLYESTLKP</aaseq>

Gene Sequence

<dnaseqindica>116..328#425..672#4174..4225#5328..5351#gagccatgtcgccggacggtcgccgcacacgccacagtcgtcgttgcacacacgcgccgccgttgttgtcgtcctcttctcctccgacgtcgtcgtcgccgtcgccgtcgtgaacatggcggcggaggcggagcagcagcaccagctgctgtcgacggccgtgcacgacacgatgccggggaagtacgtccgcccggagtcgcagcgcccgcgcctcgacctcgtcgtctccgacgcccgcatccccgtcgtcgacctcgcctcccccgaccgcgccgccgtcgtctccgccgtcggcgacgcctgccgcacccacggcttcttccaggtatcatcatcatcaacacgaattcctctcaacaatctgcagaaattgcagctaagctgacgacgagctgatcaaaatccccgcgtgtgattccaggtggtgaaccatggcatcgatgcggcgctgatcgcgtcggtcatggaggtgggccgcgagttcttccggctgccggcggaggagaaggcgaagctctactccgacgatccggccaagaagatacggctgtcgacgagcttcaacgtgcgcaaggagacggtgcacaactggcgcgattacctccgcctccactgctatcctctccaccagttcgtccccgactggccctccaatccgccctccttcaagtacaaatttctattttgtctcagctctcctacacatttagttactgcattcatgcttgccattcgccattcagtatcggttactgctaaaacacgtttgaaattgactgcgattaatttatttttggaccatttctactcccttagttctaaaatataggagtagcatataggagcaacttttagcgttaaaaatctatatcggaatataataaattatctgcctatttaatttcactcatctcaatcaatcacaactatcacatatttaattttactcgtatatttaaaagtgtaaaaaaatttaaaagtatttaaaacagagcgtccattagcacgtgattaattaattatttgctaatttttttaaaaaatagatcaatatgattttttaaagcagctttcttacagaaaatttttaaaaaagacacaccgtttaaccgtttgaaaaacatgcgcacggaaaatgaagcaagggagttgggagcttggagttccgaacacactctacaccatttccttttgtagttgcacgttagcaaacattttcaaaaggtaaatggtttgctatcatttaaaacatgacgcattagagaggatgaagcataaataaaggtttggccggtctattacacagacataagatcaatcctcaagtcagtcagtctattcacatatcacaagttcacaaataacaagatatgcgacaaaggatatcatcaatcttgtcaaattctacttgggaggtcatgacagaatgtaggaatgcaagcgggcaacccactgcctgtataaaaaactgtcttatagtttatttactacttgctactataaagtttgaaagaaaaaatcaactacaattgtaataaccggaagaaaataaaacaccgcttgctcgggccccttacatccctacaatattgttaattggaaaaagattctgatgggattgaaactattgtactgttccagagcttaataaaagtaacatagatttataatttcactgaattttactttgtaaccatatatagcaataggatcgaataccacatatatcaaattggcaggataatttgaagtagggaccactaatagttggaaaagtaaaagaacaacctaggctcaacctggaccgcaactgctggaattggctggtattagaactggaattggtaggtgccataattccaaattccagccatttcggccggtaccgaaatgaaattgataacatttggaaattgcaatgcttatcacgctagcttctaagcttcatgctccgtgtcaccttccactatgtatttttttttttaagtaaagtccatcaccggtctctaaacttgtaccgttgtgtcatcccggttactaaactcgcaaatcgaccgttcaggtcctcaaacttgttcgactgtgtcattctggtccctaaacttgcagatcactcgtttaggtcctccaacttgttcagttgtgtcacaccggtccctaaacaggacggtctagagactttatatcaaaaaaataatttataactttttcatgtgaactctaatgaagacaaactttatatcaaaattgtagctctcgatgcgacctacaactttttagttggaaagtttttgaattaaaactgtttagggtcccaaaatattgttgcatgtttatagattttgaaattttaattttaaaattgcattttgggacaaaaaatgacttaaaataaaaaaaaattcaactacaaagttgtagaccgtgtcaagggctacaaatttgatataatgtttatcttcattagagttcacattaaaaagttatgaattatttttaaatataaagtctttagaccgtcctatttgacccagatgatattcaaatccaagtttagggaccggggtgacacaactaaacaagttagaggacctaaacgagtgatctgcaagtttagggaccgggatgacccagtcaaacaagtttgagaacttgaacggttgatttgcgagtttaggtaccggaataatacagcggtacaagtttagggaccggtaatgaactttactcttttttttttcacaagtcagagtgagcaatttgctctcgaatacatctactttgataaggactgagattggcatgcataacaacaaaacgatccttgatgttacacgtacggtggagcttttcaagaatgtgcagtcactgaatcacctagctaaaacctaagagatatgctcccctttgcttctctgaacatttagcgcgcacaaacgcagatagatacctgaagccaagaaagaaacaagagaaacgagccatcaaaggtggcaaacaaaaccacgtgattcaggaacgtcgtctcatagtctatatcaatttgatttttttcccgtaaacacgtaaaagcttaagagatatacttgatagtgcagtgtcaaagagtgtgtggttttaatcttgtggtctcgtgttcaatctttaacacgctcacaatttcttcttagaaaatgtttggaaggacgtccctctccaaatcttgttttctttaacacgtactccctctgtcctataaaaaaccaacctaataccggatatgacacatcctagtactacaaatttggacatacatatgtctagattcatagtactataatatatcatatctggttctagattcattttttatgggaccgagggagtaaaagctctccacgttaatatattagaataagagttcagcatctagctaatgaccatatattctgcactgtgcgtggccatggttccaccatgtgcgcaggtagttgttagttgcgtgcaccgtgcaagaaaaacaaggtagttagttgcttgatgctctcacaaatgtttaatgtaatcgcctaaagaaatcagagcatgcgacactgacatcgaagacaatgccccgttgcaatctctggaattggaatcagaatccaaaggttacaggggttgtaacagcggccacatcttttgattaagaaaccaagaagcacatgcatggccacatgtgaacaagtgagaatatacaaggataaccacaacgtgatcaaccacgtgcagaaatattttttcaagataacgtactacttgtccaaaatctatccatgtctgtctgtactctgcaggcccattcagttttcagtgatgacaggtgctgttcttggcttcttaacttgtccaaacatacctcacttcaatacagagaattttcaatataattattacttattccttcgtcccataaaaaaataacctggtaccggatatagatttgtctagatttatagtattagaatgtatcacatccgatacttggttgatttttttatgagacgagagagtatccctcaactccaaaatatagtagtatgacaaagtagtacttgtggtatctaatcatagtattaggtttttatattttaggacggatgaagtacttaattgatcaagcgactgatcgaattcgtgatgacattgcagggagatcatcggcacgtactgcacagaggtaagagagctagggttcaggctatacgaggcgatatcggagagccttggactggagggaggatacatgagggagacgttgggggagcaggagcagcacatggcggtgaactactacccacagtgcccggagccggagctcacctatggcctccccgcgcacaccgaccccaacgccctcaccatcctcctcatggacgaccaggtcgccggcctgcaggtcctcaacgacggcaagtggattgccgtcaacccgcaacccggtgctctcgtcatcaacattggcgaccaacttcaggtgaccattcctctcagatcatcttaggcctcttttcatatctaagattgcaaaaacacttagacagaaaaaacgtagcaataaagtgacgattaataacacaaaaaagttttagaactaacatttcgatgacacataggaagaacacaagaaattttcaagtcttaggaaacatgaggtagaacctcatgatttatttcttccaaatttttcatggattgctccattttataagggctgtgtttagttcacaccaaaattagaagtttggttgaaattggaacgatgtgacggaaaagttggaagtttgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaagaaaaagtttagaactaaacacggcgaaggttgaaccctttgatctagaggtctctgtaagaaaaatcctaatatgatgcaaattcttcaaattcctccacttctcaatttgtttcataagagggctgagaatctttcagtaaagctgcatgtagaacgtgttgatgtctgaaactctgaactctgaacattaaattgctgctggttctgtcaggcgctgagcaacgggaagtacaggagcgtgtggcaccgggcggtggtgaactccgacagggagaggatgtcggtggcgtcgttcctgtgcccgtgcaacagcgtggagctcggcccggccaagaagctcatcaccgacgactcgccggcggtgtaccggaactacacctacgacgagtactacaagaagttctggagcaggaaccttgaccaggagcactgcctcgagctgttcaggacttagctcatcgcaagctcactctacgagtcgacattaaaaccgtgaggcgaacactacacactgtgaccctgaccacctccgaattaagtttgagttctctcttggatgcctatttgctctctgttaattggacactaaattcctcagcggcctccattcctagcttcacttataaggaaaaagagagcacaaagagatttcgttaatagccatcatagggaagtgtggattgtgttgaaggtcctaatcagttggttttttgtccctggttttggatattaggagggtctcttagtatctttctttttgtggaacaactttcagtgtctgtaactctgtattcctttttttacttgcaaagggaatggcatcctttgtggttgtagaactccttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0536400, RefSeq:Os10g0536400