BGIOSGA029456

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Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029456| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029456, complete gene.| tag = OsI_320...")
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Gene Name

BGIOSGA029456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029456, complete gene.

LocusTag

OsI_32003

Ensembl Transcript ID

BGIOSGA029456-TA

Ensembl Protein ID

BGIOSGA029456-PA

Length

4319

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18606396..18610714

Sequence Coding Region

18610092..18610714,18606638..18607193,18606396..18606413

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18606396..18610714 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18606396..18610714 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCAAGATCAAGACGGTGGTGGTGCTGGTCCAGGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAGTCGTTGAACCCGGAGATCGACGGCGTGACGGGCGCCGAGTTCAACCGCGCCACCGCCGGCGACCCCTCCTCCCCGGCGATCCACTTCGGCGACGGCTCCGGGTACGTGGACCCCGACCCGGGCCACTCGTTCCAGGCCATCTACGAGCAGGTGTACGGCGACGCCTACACGTGGGGGACCACCTCGCCGGCGACGAAGCCGGGGGTGCCCTCGCCGCCGATGAGCGGGTTCGCGCAGGAGGCGGAGAAGGAGCGCGCCGGCATGTCGAGCACGGTGATGAACGGGTTCCGGCCGGAGAAGGTGCCGGTGTACCGGGAGCTGGTGCGGGAGTTCGCCGTGTGCGACCGGTGGTTCGCGTCGGTGCCGACGTCGACGCAGCCGAACCGGATGTTCGTCCACTCGGCGACGTCGCACGGCCTCGTCAGCAACGACGGCAAGCAGCTCCGCGCCGGCCTGCCGCAGCGCACCATCTTCGACGCCCTCCACGACGCCGGCCACTCCTTCGGCGTCTACTACCAGTTCCCTCCCTCCGTGCTCTTCTACAGGAACATGAGGCAACTCAAGTACGTGGGCAACTTCCACCCCTACGACACCGCCTTTAAGCGCGACTGCAAGGCCGGCAAGCTCCCAAACTACGTCGTCATCGAGCAGCGCTACTTCGACCTCAAGCTCCTCCCGGGCAACGACGACCACCCTTCCCACGACGTCGCCCATGGCCAGCGCCTCGTCAAGGACGTCTACGAGGCGCTCCGCTCGAGCCCGCAGTGGCACGAGACCCTCCTCGTCATCACCTACGACGAGCACGGCGGCTTCTTCGACCACGTCCCCACCCCGGTCGCCGGCGTCCCTTCCCCCGACGGCATCGTCAGCGCCGCCCCCGTGTCGTTCGCCTTCGACCGCCTCGGCGTCCGCGTCCCGACGCTGCTCGTCTCGCCGTGGATCGAGCCGGGGACGGTGGTGCACGACCCGGCGTCGTGCGGCGGCGCGCCGGAGCCGACGTCGCAGTTCGAGCACTCGTCGATCCCGGCGACGGTGAAGAGGATATTTGGGTTGAAGGAGTTCCTGACGAGGCGCGACGCGTGGGCGGGCACGTTCGACACGGCTGCAGCTCCTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAGKIKTVVVLVQENRSFDHMLGWMKSLNPEIDGVTGAEFNRATAGDPSSPAIHFGDGSGYVDPDPGHSFQAIYEQVYGDAYTWGTTSPATKPGVPSPPMSGFAQEAEKERAGMSSTVMNGFRPEKVPVYRELVREFAVCDRWFASVPTSTQPNRMFVHSATSHGLVSNDGKQLRAGLPQRTIFDALHDAGHSFGVYYQFPPSVLFYRNMRQLKYVGNFHPYDTAFKRDCKAGKLPNYVVIEQRYFDLKLLPGNDDHPSHDVAHGQRLVKDVYEALRSSPQWHETLLVITYDEHGGFFDHVPTPVAGVPSPDGIVSAAPVSFAFDRLGVRVPTLLVSPWIEPGTVVHDPASCGGAPEPTSQFEHSSIPATVKRIFGLKEFLTRRDAWAGTFDTAAAPL</aaseq>

Gene Sequence

<dnaseqindica>1..623#3522..4077#4302..4319#ATGGCGGGCAAGATCAAGACGGTGGTGGTGCTGGTCCAGGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAGTCGTTGAACCCGGAGATCGACGGCGTGACGGGCGCCGAGTTCAACCGCGCCACCGCCGGCGACCCCTCCTCCCCGGCGATCCACTTCGGCGACGGCTCCGGGTACGTGGACCCCGACCCGGGCCACTCGTTCCAGGCCATCTACGAGCAGGTGTACGGCGACGCCTACACGTGGGGGACCACCTCGCCGGCGACGAAGCCGGGGGTGCCCTCGCCGCCGATGAGCGGGTTCGCGCAGGAGGCGGAGAAGGAGCGCGCCGGCATGTCGAGCACGGTGATGAACGGGTTCCGGCCGGAGAAGGTGCCGGTGTACCGGGAGCTGGTGCGGGAGTTCGCCGTGTGCGACCGGTGGTTCGCGTCGGTGCCGACGTCGACGCAGCCGAACCGGATGTTCGTCCACTCGGCGACGTCGCACGGCCTCGTCAGCAACGACGGCAAGCAGCTCCGCGCCGGCCTGCCGCAGCGCACCATCTTCGACGCCCTCCACGACGCCGGCCACTCCTTCGGCGTCTACTACCAGTTCCCTCCCTCCGTGCTCTTCTACAGGTCAGTAGCATGGCAGCTAGCACTATAGAATTGAAGAAACGGTTTTTACAGACGGTCGAAACATGTTTTCGTGTGCGGCCAGTATGCCTAAAGGGTCTGCGAAGATCACCATCTTCGTGTGCAGGCGGCCAAACCGCACGTGAAAACAAGTCTTCGTAGGCGGACTGCTTAACATGATGTACGTGTAGATTGATTTTTTTTTCTTTTTTGAAACTTGAATAATTTTTTGACTGATTTGAATGATTTTTTCTTAATTCACAAACAACTGAAAAAATGATATTAATGGTCAAAATGGTTTCGTATTAGGGAAGGGGGAGTTCCGATATTTCGAACCGGAATTGCAAACAATGCTATTTGAATTAGGCTCCATTTATTATAGTGGTGGATTAGTTTAATATCATAGACTAATTAACTCTATTTTTAATAGATGGAGAAGCCGTTTACTTTTGACATAACATCTGATCTTTTATTATATTTGAAAATTAATATAAGTGTCATTTATTTTGTTTTGACTTAGTTTATTATTATAAAGAAACTTTAAGCTTGATTTATATGTTTTTATATTTACACTAATTTTTTAATATAATGAATGATCAAATGTTATACCAAAATTTAATGACGCCATCTATTAAAAATGTAGGGAGTACGTGTGTAGCTAAGTAAGCAATGTGTCCATGCATTTGACTCTCGATCGATATGTTCTATGCAAATGTTGGAAGTATTTGGTTCTCGATAGCTCAGTTCATATTTGTCATTATATTCGACGAAATGATCATCCAATCAATTAACCTTGCAAATTGCACGAGATAGAGTACATTATAGTCATTGTCGAAGTCATCATTATAGTTGACACATGAATTATCCAATGGTGACGAGGGAACACATAGGATGGCTAAGTTTGAACAAAGCATATACTGATGTTTGTTTGAATTTGAAGCTAACAGAACAGATATGTCAACTAGTTGCGCGTAATAATATTATGCAGATGTTAAGACTATATATATGTTCGTCCAAGTTGTGCTTGAAGTTACTAAAAAAAAACAGAGAGAAATGTGACACTTAGGATATAGTATATATAACTTCCATTAATTGCCTTATTATTTGCTTAATTATCGCATATATAGAGGGGCTCCTAATTAACAGCCTATGATTGCTTCACGCGTTGGTAGAGACGTAGTGATCTAGTGTTGACTTTGAAATAGGACATATCGAACGGATATTCTCTTAAACATGTAGCGTACAGATCACCTCTTCTTGGATGGATGTTGTCTTGATACAATTATAAGATTAAGATGAAAATATATTAACTATCTTAACCATGTGCAGTTGACCTGACTTAGTTATATTGTATATAATATTTTCCAACAACTGCCATAGATAATTTCTTACCAGACGATCGAATATGCGAGTAAACACTAAGTGTTTGATGCCTTCAACTGCGCATATAAAATCAGATTGAAATTTTAGATAGTATAGTATTGAGTAAGTAAGAGATGCTCAACTTAGGTATAGCAGTCATGAATGTATATATATAAACTAAAATTTATAACCTACATAATGCAGACGGCATCTTTGAGGTTAGAGGGTTTGGGCGTTTCTGGTTAGCTGGATAATTTTCTTTTGTTATCTTCTGATTAATTTTGTAAGTAGTGATCCAAATAATTAATGCAAACTGAGATTTGTTAATTTTTAAATCTCGGTCACTTGATCGGTTAGATCTCAATCTAGCTAGCAGCCATGTATGATGCTTCTCTCTATAATGGTAGCAACAATTTTACTGATTTGCATGTTCCTTGCAACAGCGACCCTGTCTAAGAACAAGTTTTATTCTATAGTAAGATATAAACTAACTATAAACCTACTATGTGAAGATGAAAGAATAAGAAAAATAAAAATAGTTAGCTCTCATGCAACGGCTAACTCGACATATATACTTAGTATGGCTAATTTATTTAGTACATTATGTATCATTTACGAGTACATGAGTGTGGTATGCGTGTGTAGTTATGTATAGGCACACGAGAATCAGGGTTCAACATTTTGTTTTCGGCGTTTGTATCAGAGGGTGCCGATATACCGGGAAAACTAAAATCATCCCTTAAGAGGATATCCCCTCATTTTTGTATGTCACTTAAAAAGTGATAAAAAAACTTGAAAAAATTTAGTAGGATAGATCAATATGCGATATATCACTTCACAAACATACAAATTAAAATTCAATTTATACAATTAGAAACAAAAATAACAAATTTGACTATGAAGTGAACGCGTAATTCACAGTAAAATTTTTTATTTTTGTTTCGAATTGTATAAGTCGAATTTTAACTCGCATGTTTGCCAAACAGATATATCATATATTGATCTATCTTGACAATTTTTTTTAAAAAAAATTGATAACTTTTTGAAAAACATGCACAAAACGACTTCCGGTATACCGAGATTTCGAAAATTTTAGTTTGAAATTTTGAACAAAATTTTATCAAATTTGAACAAAATATTACCAAATTAAAAAAAAATTCGGCTGAAATAATATCATATCCGGGGAGGGTCCGATAGAACCGATATTTCGGAAATTTTGTTCCATAATTTTAAACCCTGGTGCGAGTACGTGTCTCCCGTGTAATTAAAAAATTATTTCCACCTATGATAATATTACTTGGTTAATCAGATATGCATTACCACTGAATATATTGGCATCATGGTTTTAAATCTCCCACTAAACTGCCGCTATCTCCCGCTATAGTTGTTTGAGAAGGGTTCTAGCTATTTGCTCTCATGTACAATTTAGCCGCTATAGCTCCATTTAGCCCGCTATAGCGGCAGCTATAGCTGTTTGAGAAGCTAACCGCTAAATGCCTTAGCCCGCTATTTAAAACATTAATTGGCATGCATATGCAGGAACATGAGGCAACTCAAGTACGTGGGCAACTTCCACCCCTACGACACCGCCTTTAAGCGCGACTGCAAGGCCGGCAAGCTCCCAAACTACGTCGTCATCGAGCAGCGCTACTTCGACCTCAAGCTCCTCCCGGGCAACGACGACCACCCTTCCCACGACGTCGCCCATGGCCAGCGCCTCGTCAAGGACGTCTACGAGGCGCTCCGCTCGAGCCCGCAGTGGCACGAGACCCTCCTCGTCATCACCTACGACGAGCACGGCGGCTTCTTCGACCACGTCCCCACCCCGGTCGCCGGCGTCCCTTCCCCCGACGGCATCGTCAGCGCCGCCCCCGTGTCGTTCGCCTTCGACCGCCTCGGCGTCCGCGTCCCGACGCTGCTCGTCTCGCCGTGGATCGAGCCGGGGACGGTGGTGCACGACCCGGCGTCGTGCGGCGGCGCGCCGGAGCCGACGTCGCAGTTCGAGCACTCGTCGATCCCGGCGACGGTGAAGAGGATATTTGGGTTGAAGGAGTTCCTGACGAGGCGCGACGCGTGGGCGGGCACGTTCGACACGGTGCTGACGCGGGCGGCGCCGAGGGAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGAAAAAAATCAGAGTTGCTGCACGAGCCAATCCTGCGTGCGTTCACATAAGTTGCAGAATTTCAGTGCGATGGCTTAGCTTTCTCCTGTTTGCTTTGCAAGTTGGAATTAGCAACAGTTTTATATAATAAATGTGTGTAGGCTGCAGCTCCTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029456