BGIOSGA029478

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Revision as of 09:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029478| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029478, complete gene.| tag = OS09G05...")
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Gene Name

BGIOSGA029478

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029478, complete gene.

LocusTag

OS09G0505300

Ensembl Transcript ID

BGIOSGA029478-TA

Ensembl Protein ID

BGIOSGA029478-PA

Length

3266

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18243979..18247244

Sequence Coding Region

18246939..18247244,18245780..18245913,18245578..18245691,18244938..18245033,18244546..18244633
,18244394..18244462,18243979..18244233

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18243979..18247244 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18243979..18247244 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCGCTGCCACACGCCGCCGCAATGCCGCCTCGGCGCGGGCGCGGGAGTGCTGCTGAGGCAGCGGAGCGAGGTGGCGGTGCGGTGCCGCGCGCAGCAGGTGTCCGGGGTCGAGGCGGCGGCGGGGACACCGGCGGCGCGGGCGGCGGTGGAGGGTGGGGAGAGGACGGGCCTGGCGGAGCGGCTGCGGCTGGGGAGCCTGCTGGAGGACGGGCTGTCGTACAAGGAGAGCTTCATCGTGCGGTGCTACGAGGTGGGCATCAACAAGACGGCCACCGTCGAGACCATCGCCAACCTCCTCCAGGAGGTAGGGTGTAACCATGCACAAAGTGTTGGGTTCTCCACTGATGGTTTTGCCACAACTACCACAATGAGAAAACTTGGTCTAATTTGGGTGACCAACCGAATGCACATTGAGATCTACAAGTACCCAGCATGGGGTGATGTTGTGGAGATTGAAACTTGGTGCCAAGAAGATGGAAAGATCGGTACTCGGCGTGATTGGATCCTTAAGGATCTGGCTAATGGTGAAGTTATCGGCAGAGCTACCAGCAAGTGGGTCATGATGAACCAAAATACACGCAGACTTCAAAGAGTGAGTGATGACGTGAGGGATGAGGTTTTTGTACACTGTCCAAAGACTCCAAGATTAGCATTCCCCGAGGAAAATAATGGCAGTTTGAAAAAGATTCCAGTTCTTACTGATCCTGCACAGCACTCAAGACTAGGCCTAGTGCCAAGAAGAGCTGATCTGGACATGAACCAACATGTCAATAATGTCACTTACATTGGTTGGGTACTTGAAAGTATACCTCAAGATATTATTGATACACATGAGTTACAAACAATCACTCTTGACTACAGAAGAGAGTGCCAACATGATGACATAGTAGATTCACTTACTTATATCGAGGAAGGAGAGGAGAAGAGTTCCAATGGATCCGCATTTGCTGCACCGCACCCAGAAGAGCAGCGACAGTTCTTGCACTGCTTAAGATTTGCTGGGAACGGGAACGAGATCAACCGTGGGCGCACTGTGTGGAGGAAGCTAGCTAGATGA</cdnaseq>

Protein Sequence

<aaseq>MLRCHTPPQCRLGAGAGVLLRQRSEVAVRCRAQQVSGVEAAAGTPAARAAVEGGERTGLAERLRLGSLLEDGLSYKESFIVRCYEVGINKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLGLIWVTNRMHIEIYKYPAWGDVVEIETWCQEDGKIGTRRDWILKDLANGEVIGRATSKWVMMNQNTRRLQRVSDDVRDEVFVHCPKTPRLAFPEENNGSLKKIPVLTDPAQHSRLGLVPRRADLDMNQHVNNVTYIGWVLESIPQDIIDTHELQTITLDYRRECQHDDIVDSLTYIEEGEEKSSNGSAFAAPHPEEQRQFLHCLRFAGNGNEINRGRTVWRKLAR</aaseq>

Gene Sequence

<dnaseqindica>1..306#1332..1465#1554..1667#2212..2307#2612..2699#2783..2851#3012..3266#ATGCTGCGCTGCCACACGCCGCCGCAATGCCGCCTCGGCGCGGGCGCGGGAGTGCTGCTGAGGCAGCGGAGCGAGGTGGCGGTGCGGTGCCGCGCGCAGCAGGTGTCCGGGGTCGAGGCGGCGGCGGGGACACCGGCGGCGCGGGCGGCGGTGGAGGGTGGGGAGAGGACGGGCCTGGCGGAGCGGCTGCGGCTGGGGAGCCTGCTGGAGGACGGGCTGTCGTACAAGGAGAGCTTCATCGTGCGGTGCTACGAGGTGGGCATCAACAAGACGGCCACCGTCGAGACCATCGCCAACCTCCTCCAGGTGCGCCCCCCACCACCCATGCCGGGATTCCTCCCCGTCTCCCAAAGCTACTCTTCGCTGGTCAGATTCGTGCTCTCCGTGGCTCGATTTGGGGTGGAGTCCTCTCGGATTGCGAAATGTGCTGCGGCCACGGTTTGTGTTGGGGGGAGTGGAAGCATCGTCTTCGTTCTTGTTCTTGATAGATTCGGTGGTTTGGATCTGAATTTAGACAGCTCCAATTTCTCCGTACAATTATAATCCGACCTCATTTGCTGTGATGTGACAAGATTTAGTAATACTAACTTTCCTCAAATCCGTGGGCTATCATTTGCGTAGATTGAGCTAGAGCTTTGATAAAGTCAGGTTGTTCTAGTCTTATTCTAGTCGATGTCTTTTTTGCTTTTATTTATATTTTCTGGCAATTAACAAATCCTGAGCCGGCGAAATCGCCCATCGAAATTTCATGGGCATATGCTTGCATTCCTAGGTGGTATCACACTCCTTTCTAATGCTGATTTTCTTGTCCATGTGTAAATATAATAAAGCTATAATTCCTGAATTATTATGCTTAAATACCTGATAAGTACTTCCAATAGGGGTTGTGTATCATGTCAGTTTAGGTAGTTCTGTTCTGTGTGTCTAGATGAATGTGCGTGGCTGTTAAAAAAATATTGAAATTCTGATTTTTGAGTTCTACTTTGGCATCAAATCATGCAAACAAGTCAAAATATGACTGGGCGTATATCGAGCTAGTTCTGGTGGAATATAGTGGATTGAATATAATCTTGATTTAAAAACTAAGGCAGTATCAAATGGAATGCTTTTTTTCCCTGAAAACTTCTGATCATTGAATTTGAAAAATTGATAACCAGTGGTAACAATACGTGTTTCCGCGTTCCAGAAAAACAATAAGTGTTTCTGCTTCTATTAGCATTTTTCTTAGCTATCAGTGTTGGCTTTATTTATATGAAGAACACTGTTGAGAAGCATCTCATTATTTTGTTTGTACTATGAGCTTTTAATGGTAAGATTTCTTGTAAATGCAGGAGGTAGGGTGTAACCATGCACAAAGTGTTGGGTTCTCCACTGATGGTTTTGCCACAACTACCACAATGAGAAAACTTGGTCTAATTTGGGTGACCAACCGAATGCACATTGAGATCTACAAGTACCCAGCATGGTAAGTTTTCAGGATTGCATCGAACATTGCTCCCACCCTTGTTTTTTTAGCAAGATCTAGTTCTGACTGGTGGTTCTGCTCTGGTCAGGGGTGATGTTGTGGAGATTGAAACTTGGTGCCAAGAAGATGGAAAGATCGGTACTCGGCGTGATTGGATCCTTAAGGATCTGGCTAATGGTGAAGTTATCGGCAGAGCTACCAGGTACTTATTGCTCAAGTATAAGAGTATTCATAATTACATTATTTTGAAAGTGGTTGCCTGATGTGCATTCACTCAACCATGTTGTGCATGCTGGGATTCTGAATAGGTATTGAGGGGGTCCACTGGTGATGTCTTACATGTTTTAACTTAATATTTCTCACCTCTTTACTTTTCTCCCCACCTTATTTCCACTTATTACACCTACACTTCTCCAAATGAATTCAACCAAGGTAAGCCTGTAAAATAGGAAAACTCAGGTACTAGATTTTAGCAATCTCAAAAGAGAGTGTGAATCGAAACACTGGAATTTTTTTTAATGCCCAATGATCTTGGTGCTTGTCTTATGCTTGAATGTTCTTACACTTGCTGGCTGGCAATTGTAGCAGCCTTAATTATTCGTTCTTAATGAGTGAGACCTGCTAATGATTAATTGGAACTTAGTAGTTTGTACTGAACGAACCGTTCTCTTTTGGTGGAAAACAACAAACATTTTCATTATTTAGTGTTTACAGTGTAACACAGCCATATCTTCTTGTTTGTCCAGCAAGTGGGTCATGATGAACCAAAATACACGCAGACTTCAAAGAGTGAGTGATGACGTGAGGGATGAGGTTTTTGTACACTGTCCAAAGACTCCAAGGTAAACCTCCTCTTGTACTCATTTAGCCACAGTTTTCTTGCACATGCACATTTTTGTTGCTTTGATGCATCTCTGTTTTTACTCTTCAATTGACCCACAGATTCCCTTTCTTTAACTTGGCTCTGTTAAACACACTTGGATACATATTCAGTGGTTTTGAATTACTCGAGAATCAGAAGAATATGTTTTCTTTGTATTCGTAGTTGCAAATAATTCATTGGTAGCTTGACTGAAGATTGTACATGTATTTTCTCAAATGACTGTTATGGTATAATAATTATTGTAACAAGCTACCATTGTGCAGATTAGCATTCCCCGAGGAAAATAATGGCAGTTTGAAAAAGATTCCAGTTCTTACTGATCCTGCACAGCACTCAAGACTAGGCCTAGTGGTTAGTTCTCGTCTCAGAATGCGGTTCTTTTGCTCTGTCCCTAAACAATTCTGTGCTGACATATATTAATTTCTGTATTGCAGCCAAGAAGAGCTGATCTGGACATGAACCAACATGTCAATAATGTCACTTACATTGGTTGGGTACTTGAAGTAAGTTTTCCATTATCTCAGTTTTGCTACCAGTTAACTGTTCTTGCTTCATGTGACAGGCTGACAGCCCTCTCCTGGCTGTAATCTTACTTTGAGCAGTTATCATCCTTGTTGATTTGTGATGATTTCTGATCTCTTTCTTTTTCCTTCTAAATGGCAGAGTATACCTCAAGATATTATTGATACACATGAGTTACAAACAATCACTCTTGACTACAGAAGAGAGTGCCAACATGATGACATAGTAGATTCACTTACTTATATCGAGGAAGGAGAGGAGAAGAGTTCCAATGGATCCGCATTTGCTGCACCGCACCCAGAAGAGCAGCGACAGTTCTTGCACTGCTTAAGATTTGCTGGGAACGGGAACGAGATCAACCGTGGGCGCACTGTGTGGAGGAAGCTAGCTAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029478