BGIOSGA029479

From RiceWiki
Revision as of 09:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029479, complete gene.| tag = OS09G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029479, complete gene.

LocusTag

OS09G0505100

Ensembl Transcript ID

BGIOSGA029479-TA

Ensembl Protein ID

BGIOSGA029479-PA

Length

4618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18222423..18227040

Sequence Coding Region

18224105..18227040,18222423..18222663

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18222423..18227040 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18222423..18227040 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGAGGGTGAAGGCGAAGGCCAAGAATCCGAGGAAAGCACAGCAACAACAGGAGCCGACGGCAGCGGCGCCCTCTGATGCTGGATCTGGGGATGCGGCGGCGGCGGCGGCGCAGGACTCGGGGAATTCGACGGAGGAAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCGTCGGCCAGCGGCAGGGAGCAGTGCGGACACTACGGCGGCGACAGCGCCCGCTTGGACAAGGTCCTCTTGGAGATCATGACGTCCAAGCATTTCGCGTCGTGCGAGCATTGCCGGGATGATGCCCCTAGGAAGAAAGGGGGTGGCAAGGAGAAAGGGGGTAAGCAGCAGCAGAAGAAGAAAGGAGGTGGAACGAAAGGTTCCGCGGCCAAGGCGAAGGTGGAGAAGAGTGACATGTGGGTGTGCTTGGACTGCGGTCGGCATTTCTGCGGGGGTGAGGTTGATGTGACCAAGCCGTACGGCCATGCCCGAAGGCATGCCAAGCAGGACCGGCATTGGTGGGCTGCACGGTTTGATGATCCGACTGTTGCGTTTTGTTTGTCGTGTGAGAAGGAGGTGTCGATCGAGATGCCTAGAATAGAGACAGTTGCCGCAGTGCCAACAGAGGTGGCTGGTGCAGCTGACAGAGATCTAGGTTTGGTTAACTCTCATGGTAGTGTAATCAGAGGGCTGCCAAATCTTGGGAACACATGCTTCTTCAATGCAGTGATGCAGAGCCTCCTCGCGCTTGATAGGTTGCGCAGTAAGATGTTGGGACCAGATGTTCCAACGGGGGCTCTTTTGATGTCATTGAAGAAACTCTTCATGGAGACAAGTGCTTCAAATGATGTAGGAGGTGCGCTGAGTCCAAAGAATCTCTTCTCAAATATTTGCTCAAAGTACCCGCAGTTCAGGGGCTTCCAGATGCAGGACAGCCATGAATTACTCCGCTGTTTTCTTGATGGTCTGCACACGGAGGAAAATGAAGCACGGAAGCTAGCGGATGAAGCTTCAAGTGCAACCATTCCTACAATTGTCGATTCCATCTTTGGGGGTCAGCTGTCTAGTACAGTGTCCAGCACAGAATGCACACACAGTTCTGTTAAACATGACCAATTCCTTGATCTGTCACTACCAGTTCCATCCAGGAGGCCTCCAGCCAAGAGTGTGTCATCACCACCAGCAAAGAGGAACAAACAATCCCTAAGAGATAGGAATAAAAATCGGAGATATGGGAAGATTTCGACCCGAGTGACTCCTACAATAGAGGTGAGCAACAAAGAAAAGATTCAAACAGTTGCTGAAGGCAATAATTCCCTGATTCCTGGTTCAGAGTCAGGACAGGTTGTCAGTGAGAAAGAGCCTGAGCCTTCTGAATGCAGTGAGTCATGTGCTTCTGTGCCTAATCTAGAACAAACAGGTACTTCAAATGTGGAGGATGGCACTTGCTGGTTGGATTACATTGATGATGCAGATGAAGCAAAATCAGAGATTCTTGATTCTGCAGATTCTATTGAAGCGGGACAGATCTGGGAAGACAAGGGTGTTACTTATGGTCCATTTCTTCCACAGGATGATGCCTTATCGAAAGAGCAGGTCTTGGGTTCTGAACACTCTGGTGAAAACCCTATTGATGATGCAACATCTTCACAGCCTGTTATCTTGCTTCCTTACAAAGAATTTGGTTCCACTGCCAATGAAATGGATGGAACCACAGAAAATTCACAGAAACCAGAAGATGCAGTTGCTCCTCCAGCTGTTTCTCCCTTGCCAGAAGATAATGCACAACCTGCATCTGTTGGCGATGGGGATCAAGATGACTATGTTGGTCTTGGTGATATGTTCAATGAGCCTGAAGTTACTTCTGAAGTCAAGAAAGAAACAGGTACAGTTGAAGATATTGATGTGATGGCCTGGAGTAGCAACAGTGCTGAAGACGAGGTGGATGATAGTAATGCTCCCGTATCAGTTGAGGGCTGCTTGGCTTTGTTTACTGAACCGGAGTTGCTCTCTGAACCATGGCACTGTGAGCTCTGCTCTGACTCTATTGCATGCCCAAACACCAATGATGGCAAAGATGATGAGATGGCGACTAGTGTCAATGAAAGAAAGGATGGTGAGGAGATGATGGCAGGTGGTGATGAAACACAAGACGGTGATAAGTTGATCGCTAACTGCACCGAAAAGGAGGGCATTGATCAGATTATGGCAACTGACGGTTGCTCAGATAATTTAAATAGTGATATGAACAGTAAAGAAGGTGGTTGTGCAAATTCTTCTTTGGTTGGTGCTGACAACTCAGTTGATGCTAACTTTCCAGAAAATGGGAAAGTTGCTTTACTGAAAACAGGTTCGTCACTTGTTGACACAACTGAACAGGCAGACAGCAAAGCATATCGTCGAGAGATTAGGGATTTGAACAACTCAGCAGTGGAATATACATCTTCGAGTAAGCAACCTCATGATTCTGCCCAGCATAAGGATGAACATAATGTGGATGTAGCCTCTGAAGAAACAACTGCACCAGAGTGTTCTTGTGACAACGAATCTGCCTCTTGCAGCACAACCAATAAGAATGAAGCTGAATGTGGTGTTGGTGCTGAAGAAATTGTTACTAGTAGCCTTCCATCTGAGACGCAAAGAATCTTACCAGGTGAAAAAGACAATGAAGATGTTGTCACGCGGAATCATGGCAGAAGGAAGCGAATGAAGATGGTTGGCAAGGCACATCAAGGGCAAGATAACCAAAATGAACAGAAAGAGAATGGAAAAAAGGTTTTCAGATCTGCAATGAGAAGGATCCTTATTAGCAAGGCGCCACCTGTATTGACAATTAATTTGAACAGATTCAGTCAGGACTCGCATGGTCGGTTCAAGAAATTGAAAGGGCATGTGCGCTTTAAGGAGACACTTGATGTGCGGCCATTCATGGACCCAAGGTCTAAGGAGAATGACAATACAACTTATCGTCTCGTTGGCGTTGTTGAGCACTTGGGAACCATGGCAGCTGGGCATTATGTTGCATATGTGAGAACTGGCAAGATTGGGGGTCGGCAGCAGAGGAGCACCGGCTCCAAGTCATGGTTTTATGCAAGTGATGCACAAGTCAGAGAAGCCTCTCTGGAGGAAGTTCTTAACTGCGAGGCTTACATACTGTTTTACGAAAGGGTGGGAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MGKRVKAKAKNPRKAQQQQEPTAAAPSDAGSGDAAAAAAQDSGNSTEEAAAAAAAAAAAASASGREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKKGGGKEKGGKQQQKKKGGGTKGSAAKAKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEVSIEMPRIETVAAVPTEVAGAADRDLGLVNSHGSVIRGLPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPTGALLMSLKKLFMETSASNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEENEARKLADEASSATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPVPSRRPPAKSVSSPPAKRNKQSLRDRNKNRRYGKISTRVTPTIEVSNKEKIQTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCWLDYIDDADEAKSEILDSADSIEAGQIWEDKGVTYGPFLPQDDALSKEQVLGSEHSGENPIDDATSSQPVILLPYKEFGSTANEMDGTTENSQKPEDAVAPPAVSPLPEDNAQPASVGDGDQDDYVGLGDMFNEPEVTSEVKKETGTVEDIDVMAWSSNSAEDEVDDSNAPVSVEGCLALFTEPELLSEPWHCELCSDSIACPNTNDGKDDEMATSVNERKDGEEMMAGGDETQDGDKLIANCTEKEGIDQIMATDGCSDNLNSDMNSKEGGCANSSLVGADNSVDANFPENGKVALLKTGSSLVDTTEQADSKAYRREIRDLNNSAVEYTSSSKQPHDSAQHKDEHNVDVASEETTAPECSCDNESASCSTTNKNEAECGVGAEEIVTSSLPSETQRILPGEKDNEDVVTRNHGRRKRMKMVGKAHQGQDNQNEQKENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGHVRFKETLDVRPFMDPRSKENDNTTYRLVGVVEHLGTMAAGHYVAYVRTGKIGGRQQRSTGSKSWFYASDAQVREASLEEVLNCEAYILFYERVGD</aaseq>

Gene Sequence

<dnaseqindica>1..2936#4378..4618#ATGGGGAAGAGGGTGAAGGCGAAGGCCAAGAATCCGAGGAAAGCACAGCAACAACAGGAGCCGACGGCAGCGGCGCCCTCTGATGCTGGATCTGGGGATGCGGCGGCGGCGGCGGCGCAGGACTCGGGGAATTCGACGGAGGAAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCGTCGGCCAGCGGCAGGGAGCAGTGCGGACACTACGGCGGCGACAGCGCCCGCTTGGACAAGGTCCTCTTGGAGATCATGACGTCCAAGCATTTCGCGTCGTGCGAGCATTGCCGGGATGATGCCCCTAGGAAGAAAGGGGGTGGCAAGGAGAAAGGGGGTAAGCAGCAGCAGAAGAAGAAAGGAGGTGGAACGAAAGGTTCCGCGGCCAAGGCGAAGGTGGAGAAGAGTGACATGTGGGTGTGCTTGGACTGCGGTCGGCATTTCTGCGGGGGTGAGGTTGATGTGACCAAGCCGTACGGCCATGCCCGAAGGCATGCCAAGCAGGACCGGCATTGGTGGGCTGCACGGTTTGATGATCCGACTGTTGCGTTTTGTTTGTCGTGTGAGAAGGAGGTGTCGATCGAGATGCCTAGAATAGAGACAGTTGCCGCAGTGCCAACAGAGGTGGCTGGTGCAGCTGACAGAGATCTAGGTTTGGTTAACTCTCATGGTAGTGTAATCAGAGGGCTGCCAAATCTTGGGAACACATGCTTCTTCAATGCAGTGATGCAGAGCCTCCTCGCGCTTGATAGGTTGCGCAGTAAGATGTTGGGACCAGATGTTCCAACGGGGGCTCTTTTGATGTCATTGAAGAAACTCTTCATGGAGACAAGTGCTTCAAATGATGTAGGAGGTGCGCTGAGTCCAAAGAATCTCTTCTCAAATATTTGCTCAAAGTACCCGCAGTTCAGGGGCTTCCAGATGCAGGACAGCCATGAATTACTCCGCTGTTTTCTTGATGGTCTGCACACGGAGGAAAATGAAGCACGGAAGCTAGCGGATGAAGCTTCAAGTGCAACCATTCCTACAATTGTCGATTCCATCTTTGGGGGTCAGCTGTCTAGTACAGTGTCCAGCACAGAATGCACACACAGTTCTGTTAAACATGACCAATTCCTTGATCTGTCACTACCAGTTCCATCCAGGAGGCCTCCAGCCAAGAGTGTGTCATCACCACCAGCAAAGAGGAACAAACAATCCCTAAGAGATAGGAATAAAAATCGGAGATATGGGAAGATTTCGACCCGAGTGACTCCTACAATAGAGGTGAGCAACAAAGAAAAGATTCAAACAGTTGCTGAAGGCAATAATTCCCTGATTCCTGGTTCAGAGTCAGGACAGGTTGTCAGTGAGAAAGAGCCTGAGCCTTCTGAATGCAGTGAGTCATGTGCTTCTGTGCCTAATCTAGAACAAACAGGTACTTCAAATGTGGAGGATGGCACTTGCTGGTTGGATTACATTGATGATGCAGATGAAGCAAAATCAGAGATTCTTGATTCTGCAGATTCTATTGAAGCGGGACAGATCTGGGAAGACAAGGGTGTTACTTATGGTCCATTTCTTCCACAGGATGATGCCTTATCGAAAGAGCAGGTCTTGGGTTCTGAACACTCTGGTGAAAACCCTATTGATGATGCAACATCTTCACAGCCTGTTATCTTGCTTCCTTACAAAGAATTTGGTTCCACTGCCAATGAAATGGATGGAACCACAGAAAATTCACAGAAACCAGAAGATGCAGTTGCTCCTCCAGCTGTTTCTCCCTTGCCAGAAGATAATGCACAACCTGCATCTGTTGGCGATGGGGATCAAGATGACTATGTTGGTCTTGGTGATATGTTCAATGAGCCTGAAGTTACTTCTGAAGTCAAGAAAGAAACAGGTACAGTTGAAGATATTGATGTGATGGCCTGGAGTAGCAACAGTGCTGAAGACGAGGTGGATGATAGTAATGCTCCCGTATCAGTTGAGGGCTGCTTGGCTTTGTTTACTGAACCGGAGTTGCTCTCTGAACCATGGCACTGTGAGCTCTGCTCTGACTCTATTGCATGCCCAAACACCAATGATGGCAAAGATGATGAGATGGCGACTAGTGTCAATGAAAGAAAGGATGGTGAGGAGATGATGGCAGGTGGTGATGAAACACAAGACGGTGATAAGTTGATCGCTAACTGCACCGAAAAGGAGGGCATTGATCAGATTATGGCAACTGACGGTTGCTCAGATAATTTAAATAGTGATATGAACAGTAAAGAAGGTGGTTGTGCAAATTCTTCTTTGGTTGGTGCTGACAACTCAGTTGATGCTAACTTTCCAGAAAATGGGAAAGTTGCTTTACTGAAAACAGGTTCGTCACTTGTTGACACAACTGAACAGGCAGACAGCAAAGCATATCGTCGAGAGATTAGGGATTTGAACAACTCAGCAGTGGAATATACATCTTCGAGTAAGCAACCTCATGATTCTGCCCAGCATAAGGATGAACATAATGTGGATGTAGCCTCTGAAGAAACAACTGCACCAGAGTGTTCTTGTGACAACGAATCTGCCTCTTGCAGCACAACCAATAAGAATGAAGCTGAATGTGGTGTTGGTGCTGAAGAAATTGTTACTAGTAGCCTTCCATCTGAGACGCAAAGAATCTTACCAGGTGAAAAAGACAATGAAGATGTTGTCACGCGGAATCATGGCAGAAGGAAGCGAATGAAGATGGTTGGCAAGGCACATCAAGGGCAAGATAACCAAAATGAACAGAAAGAGAATGGAAAAAAGGTTTTCAGATCTGCAATGAGAAGGATCCTTATTAGCAAGGCGCCACCTGTATTGACAATTAATTTGAACAGATTCAGTCAGGACTCGCATGGTCGGTTCAAGAAATTGAAAGGGCATGTGCGCTTTAAGGAGACACTTGATGTGCGGCCATTCATGGACCCAAGGTATTGAACTTTTTTTTTCAGTTAGAAGTACTGATGTTTTTTATCAACCTGTCAGCTTTCTGATTAGCTGTGACCATCTGCCATTAGTCTATTCGCATTTGCTACTAAGAGGTCCCACTGTCCATGCATAGCCATTGACATTTAAATATTTACACTACAAATTACCTCACAAGTGGTTTTCAACTATGTAGCTGATATTACTCCTGCAAGGAAATTGTCGTAGACACATAGTTAGGATAGATAGCGAATGTTTAGCTTCCAGGTAATTTTGGTTCCTCGTCCCTAGCGATTGGCCAATGTTGTTTGAGAAGATAAATTGCTGCACTATTTGTCATGCTTTTTAAGAAGACATGTAGATCAGATTTTTGTTACATTGAGAGTGCATTGCATTATCGTATTCAACTCCACCATGTCCTTATCGTCGTATAAACAGTAATATACCTGAAAACATTTCATAGTCAATGTGAATTTGGAGGTCTGGGTTAATTTAGCAGTGCAACACGATTTAGACTACAAGGTAGTAAGCAGATCAATATGTCTCTTTTGTTTACCTGGAAATGTGTTTGTATTTACGGATGCTATGTCTATGATTAATAAATGGGTTGCTTCTTTGAACTTTCTAATTCCTAAATAATCAGTTATATCTATTGAAAGAGAACAACATCATGTGGATACAAATTGGTTAGCTTTTAGAAGCTGCAGCAAATTGTTATTCACCATTTATATGCTGATTGAAACACTTTGACTTGAGCAATGGTTCTGAAATTTCCCATCGGCTTCATAATTTTGGGATCATGTCTAGATGTTGACCATGTAGTACAATAGTATACACAACCCAGTGCATGTACATTCTTGCCCATGATTTTTCAGAAAGGATGGCCAGTCCAAAAAATTGTAAAAGAACAGTCCTAAACCAGCTAGTGCCTAGTGATATGGGCATATGGTAGTGATTAGCAGAAAACAAGACCTGGTTTCCTCTTGCCCTCTCTCTTCTGCTGGTTACACACGAAATTAGGTAGATGAAAGTTCAATCCAATCTTTCAGCTGTTCTTTAATTTCAAGAGTTGGTGTTAAAAGTCATCCCATAGATGTCCCAAAGAAAAGGCATTTACTTTTAATAGCTTGTACCATCTACACATGATGACTTCTCAAGTGTATATAACAGTATGCCTTCCCATCTGTACAAGAATAGGGGAAAAATGTCTTCCAGCTTCCAATCTTGAATTGAACTAAGAAACGTTGTAGATGTGCATGTATCACATCTGATTTGCACGCGAAATATCAGTATTTTCGGTTTCAATGTTATTAACTTGATATTGAGCCCTTTTGTTGTTGCATATTTCAACTGAATGGTCTTAAACTTGGTGTCTTCAATTTGTGATTTATGAATACTGCAGCCTTAGAGTTGATCTGCTCATCACCTATTCTCTGTAATCTGCAGGTCTAAGGAGAATGACAATACAACTTATCGTCTCGTTGGCGTTGTTGAGCACTTGGGAACCATGGCAGCTGGGCATTATGTTGCATATGTGAGAACTGGCAAGATTGGGGGTCGGCAGCAGAGGAGCACCGGCTCCAAGTCATGGTTTTATGCAAGTGATGCACAAGTCAGAGAAGCCTCTCTGGAGGAAGTTCTTAACTGCGAGGCTTACATACTGTTTTACGAAAGGGTGGGAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029479