BGIOSGA029489

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Revision as of 09:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029489| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029489, complete gene.| tag = OsI_319...")
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Gene Name

BGIOSGA029489

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029489, complete gene.

LocusTag

OsI_31933

Ensembl Transcript ID

BGIOSGA029489-TA

Ensembl Protein ID

BGIOSGA029489-PA

Length

2625

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18096144..18098768

Sequence Coding Region

18098693..18098768,18098390..18098499,18097009..18097689,18096617..18096769,18096144..18096521

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18096144..18098768 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18096144..18098768 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCATGCTCCTGCTGAGCCGGCTCATGCCCACCCGGCGGCCGCGCCGTCGCCGGCCACACAAATCCCGCCGCAGCGGATTGATTGCTAAATCGGCTAAAAGGAAGCGCTCACACTGCCAGCAAGATGATGATGATTCTCAGGGTGGTAAAAGGATGAGAAATTCGGTGCCAACCCTTCCAGAGGACATCTGGTGTCATATACATTCCCTGATGCCAATGCGAGATGCTGCTCGTGTTGCATGTGTGTCTCGTGCCTTTCTTAGTTCCTGGAGATGTCATCCCAACCTCACCTTTAACGAGCGTACACTGGGATTAGATGAATATGTTTTTGAAACAGATTTCATCAGCAAAGTTGACCACATTCTTGAAAAACACTCTGGCATTGGAGTGAAGACATTCAACCTTCAAGTCCCCTATGAGCTAGATGTGTGTGATCATCTCGATCATTGGCTTCAGTTTGCTATTACACCACGGATTGAAGAACTCAATCTTATGCTGTATGGAACCGTGCAAGAGTACAACTTCCCATGCTCACTTCTATCTGATGGGATTGCAAATTCTATTCGGTTTCTTGATCTTGGCCATTGCGCCTTCCATCCCACAGTCGAGCTTGGTTCATGGAGAAGCCTTAAAAGGCTATGTTTGTCTTTTGTGCATATCACCGGGGATGAGTTAGGGTGTGTTCTTTCTAATTTGTTTGCTCTGGAGTGGTTGGAACTCATATATTGTGATAAGATAGCTAGCCTGAAGATACCTTGCACACTGCAGCGGCTCAGCTACCTTAAGGTTTCAGAATGCAGCAGGATGCGAGTTATAGAGAGCAAAGCTCCAAAAGTATCCAATTTTTACTTCACTGGATACAAGGTGGTCAACACACCAATGCTAACTACCAAATTCCTCTACCTGAAGTACTTGAGTATTTCTCTCTCTGGATTGACTGTTTCGCCGTCTTATGATTATTTTTCTCTGGTTTCCTTTCTTGATGCTTCTCCTTTCTTGGAGACTTTCTTCTTGGCTATATCTAAGGAACAAATGAAGCGTGAATCGAAATTCAGAGATTCCTCACATATGAGGCAGATTCAAGAACACCGTCATGAGCACCTCAAAAGCGTGACGATTATTGGTTTCTGCTCCGCGAAGAGCTTGGTTGAGCTAACATGTCATATCCTCGAGAACGCAGTATCACTTGAGTGCCTTACACTGAACACAACCCTTGGCTTTGCTAGCCGTTCTGAACACAGTCCTGGTACATGCTTTCCAATGGGCAAGGCTGTTCTCATGGGAGTACCTAAGGCTCTCTCAGCTATCCAGACATACATTGTGGGGAAAGTTCCCTCCACAGTTAGATTAAATGTTATGGAACCATGCAACCTGTGCAATGGTATTGGGCATTAG</cdnaseq>

Protein Sequence

<aaseq>MGMLLLSRLMPTRRPRRRRPHKSRRSGLIAKSAKRKRSHCQQDDDDSQGGKRMRNSVPTLPEDIWCHIHSLMPMRDAARVACVSRAFLSSWRCHPNLTFNERTLGLDEYVFETDFISKVDHILEKHSGIGVKTFNLQVPYELDVCDHLDHWLQFAITPRIEELNLMLYGTVQEYNFPCSLLSDGIANSIRFLDLGHCAFHPTVELGSWRSLKRLCLSFVHITGDELGCVLSNLFALEWLELIYCDKIASLKIPCTLQRLSYLKVSECSRMRVIESKAPKVSNFYFTGYKVVNTPMLTTKFLYLKYLSISLSGLTVSPSYDYFSLVSFLDASPFLETFFLAISKEQMKRESKFRDSSHMRQIQEHRHEHLKSVTIIGFCSAKSLVELTCHILENAVSLECLTLNTTLGFASRSEHSPGTCFPMGKAVLMGVPKALSAIQTYIVGKVPSTVRLNVMEPCNLCNGIGH</aaseq>

Gene Sequence

<dnaseqindica>1..76#270..379#1080..1760#2000..2152#2248..2625#ATGGGCATGCTCCTGCTGAGCCGGCTCATGCCCACCCGGCGGCCGCGCCGTCGCCGGCCACACAAATCCCGCCGCAGTAAGCGCTTCTAATTGCCCTCTCAGTTGTTCCCCTCAACCCTGAAACTCATTAGCATTATAACGCAAAAGTTTGGTTAATGGAGACAGATCGATTGGATTTCTCTATGCTCGTTTGTGTGCTTCGATTTTTTATTTTTATTTTTGTTTTTATTTTCTTCTGTTAATGCCTGAATTTATCTGTAACCGCGCAGGCGGATTGATTGCTAAATCGGCTAAAAGGAAGCGCTCACACTGCCAGCAAGATGATGATGATTCTCAGGGTGGTAAAAGGATGAGAAATTCGGTGCCAACCCTTCCAGAGGTATGGCATGTAATGTTGATATAATCGAATAGTTATACTGAAAGTAAATACCACTATCACTACTCTAACACAGATTGGTACACCTGCTGTGCCTAAAGAACAAAAGTTATGAACAGATGAGCAAAACTTTCAGTGCTATATTTACATTATCAATTACAGTCTTACTGCATTAGTAGCTTTGTTTTCTTCTAGATATCGTGGCTTTCGCTCTCGAGCTGCAATTTGAGTCCTTGATAATATGGAACAATTTTGGAGTAAACTTCCTAGATCTATCTCCCTAATTAGCAGTAGCTAGAGCATATCCCTTATTTACTCAAATTCCTCAGAACTTAGAGCTTTTCAAATTAATATGTACAGAGGGCCTTGCTAATGTTTTTCAGAAATCTACAGAGGGCAAATACTACTTAACTAAATTATATTCCAACTAACAACACTGTCAATAAAAGATAACTCTATGCAATGTTTCATTTGCGTGCCATTGCATTCTAATGCATTCATAGTACGCATATGTAATTTAGTGCACATTGTGCAATCTTGCACATAGCACCTGGGTTGAAAAAGAATGATGCCCCATATGGTTCTATTTTCCCCTCTAATCAAATAACCCAATCCATTGAAACTCTATTTTTCCCCCTCTAATCAAATAACCCAATCCATTGAAACTCACATTGCAATGTTGAAATTTTATCCCATGATGCAGGACATCTGGTGTCATATACATTCCCTGATGCCAATGCGAGATGCTGCTCGTGTTGCATGTGTGTCTCGTGCCTTTCTTAGTTCCTGGAGATGTCATCCCAACCTCACCTTTAACGAGCGTACACTGGGATTAGATGAATATGTTTTTGAAACAGATTTCATCAGCAAAGTTGACCACATTCTTGAAAAACACTCTGGCATTGGAGTGAAGACATTCAACCTTCAAGTCCCCTATGAGCTAGATGTGTGTGATCATCTCGATCATTGGCTTCAGTTTGCTATTACACCACGGATTGAAGAACTCAATCTTATGCTGTATGGAACCGTGCAAGAGTACAACTTCCCATGCTCACTTCTATCTGATGGGATTGCAAATTCTATTCGGTTTCTTGATCTTGGCCATTGCGCCTTCCATCCCACAGTCGAGCTTGGTTCATGGAGAAGCCTTAAAAGGCTATGTTTGTCTTTTGTGCATATCACCGGGGATGAGTTAGGGTGTGTTCTTTCTAATTTGTTTGCTCTGGAGTGGTTGGAACTCATATATTGTGATAAGATAGCTAGCCTGAAGATACCTTGCACACTGCAGCGGCTCAGCTACCTTAAGGTTTCAGAATGCAGCAGGATGCGAGTTATAGAGAGCAAAGCTCCAAAAGTATCCAATTTTTACTTCACTGGATACAAGGTAAAACTTTCACTTGGAGAATGGTTGCGAGTGAAGGAACTATGTATGCTCAGTTCACACCTTGTCTGTTATGCCTGTGCCAATCTTCCATCCATGATGTCAAATCTTGAAACTCTTTCTATATGTTCACTCGATGAGGTATTACACACCAACAGTTTAGATGATTATATAGACTATTGTTATGCATATTATAGTATTCATGCATTGGACTTTGATTAATCCGATACATCTTTATGCAGGTGGTCAACACACCAATGCTAACTACCAAATTCCTCTACCTGAAGTACTTGAGTATTTCTCTCTCTGGATTGACTGTTTCGCCGTCTTATGATTATTTTTCTCTGGTTTCCTTTCTTGATGCTTCTCCTTTCTTGGAGACTTTCTTCTTGGCTGTAAGATTCCGTTCACTGTTCATTTCATCCTGTAAAACTATCTAGTGACTATGGCAAAAGCATCAATTGATGTATATTATTTTTCTCATCTCTAGATATCTAAGGAACAAATGAAGCGTGAATCGAAATTCAGAGATTCCTCACATATGAGGCAGATTCAAGAACACCGTCATGAGCACCTCAAAAGCGTGACGATTATTGGTTTCTGCTCCGCGAAGAGCTTGGTTGAGCTAACATGTCATATCCTCGAGAACGCAGTATCACTTGAGTGCCTTACACTGAACACAACCCTTGGCTTTGCTAGCCGTTCTGAACACAGTCCTGGTACATGCTTTCCAATGGGCAAGGCTGTTCTCATGGGAGTACCTAAGGCTCTCTCAGCTATCCAGACATACATTGTGGGGAAAGTTCCCTCCACAGTTAGATTAAATGTTATGGAACCATGCAACCTGTGCAATGGTATTGGGCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029489