Os10g0537500

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0537500| Description = Protein of unknown function DUF1084 family protein| Version = NM_001071709.1 GI:115483161 GeneID:4349243| Length = 3...")
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Gene Name

Os10g0537500

Description

Protein of unknown function DUF1084 family protein

Version

NM_001071709.1 GI:115483161 GeneID:4349243

Length

3853 bp

Definition

Oryza sativa Japonica Group Os10g0537500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21391851..21395703

Sequence Coding Region

21391879..21392184,21392436..21392526,21392630..21392682,21392769..21392861,21392948..21393019
,21393641..21393713,21394097..21394142,21394628..21394691,21394776..21394829
,21394918..21394995,21395379..21395471

Expression

GEO Profiles:Os10g0537500

Genome Context

<gbrowseImage1> name=NC_008403:21391851..21395703 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21391851..21395703 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatccgaattcgattccaatcctctcgaccagcgagaggcctcgccttcctcctctcccccacgttggcgtagctcgcgcgcgcgcgcgcgcccgcgcccgaatccacaaacagcgtggtcgcgggcgggggttctcgatgaggcggatgctggaggtggcggcggacgccggctcgtctgcggcggcggcggcggcaaacggcgcggtggactggtggcgcgacgtgaacgagtcgccggtgtggcaggaccgcatcttccacgtcctcgcggcgctctacggcttcgtctccgccatcgcgctggtccaattgatcagaatcgaatgtagggtgcccgaatacgggtggacaacacaaaaggtgttccatttcctcaacttcctcgtgaacggcgtgcgatccatagtgtttgtgctgcgacgaaatgtgcagctcatacatccagagatacttcaacatgtgcttctagatatgcccgggctcgcattcttcacgacgtatgcacttttggtgctcttctgggccgagatttattatcaggcgcgtgcaatgtccactgatgggcttaggccaactttctattggatcaatgctgtgatctatgcaattcagataatattatggatggttctatggtggaaaccagttcgagttatgatcatcttgtcgaagatgttctttgcaggtgtatcactgtttgcggcttttgggtttcttctctacggtgggaggttattcctgatgttgcaacgtttcccagttgaatcgaaaggacggcgcaagaaattgcaggaggttggctatgtgactacaatctgctttacttgtttcttgatcagatgtgtcatgatgtgtctcaacacatttgataaagcagctgaccttgatgttctgaaccatccgattctgaatttcttttattacttgctggttgagatcgtaccttcagctttggtgctattcatcctaaggaaactgccaccgaaacgggggatcacacaatatcatccaattcattag</cdnaseq>

Protein Sequence

<aaseq>NPNSIPILSTSERPRLPPLPHVGVARARARARARIHKQRGRGRG FSMRRMLEVAADAGSSAAAAAANGAVDWWRDVNESPVWQDRIFHVLAALYGFVSAIAL VQLIRIECRVPEYGWTTQKVFHFLNFLVNGVRSIVFVLRRNVQLIHPEILQHVLLDMP GLAFFTTYALLVLFWAEIYYQARAMSTDGLRPTFYWINAVIYAIQIILWMVLWWKPVR VMIILSKMFFAGVSLFAAFGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFT CFLIRCVMMCLNTFDKAADLDVLNHPILNFFYYLLVEIVPSALVLFILRKLPPKRGIT QYHPIH</aaseq>

Gene Sequence

<dnaseqindica>29..334#586..676#780..832#919..1011#1098..1169#1791..1863#2247..2292#2778..2841#2926..2979#3068..3145#3529..3621#acgcgagttcgcgaaagaaagaaactgaaatccgaattcgattccaatcctctcgaccagcgagaggcctcgccttcctcctctcccccacgttggcgtagctcgcgcgcgcgcgcgcgcccgcgcccgaatccacaaacagcgtggtcgcgggcgggggttctcgatgaggcggatgctggaggtggcggcggacgccggctcgtctgcggcggcggcggcggcaaacggcgcggtggactggtggcgcgacgtgaacgagtcgccggtgtggcaggaccgcatcttccacgtcctcgcggcgctctacggcttcgtctccgccatcgcgctggtaggcgcccgccaccctccacccttccattacgttacgatctgtggaggctggatctgattgctcagtggtatctgttttgattgggttttcttttttttatcttccctttcgattgtgcgcgtcggcacgatctgtgggcgttcggttctaaactttgggtgtttctgaatttctgatggatatcttgaggctgggtcatgagcgttgtaagaaatctaaatttttttggggcttgatttctcttgtaggtccaattgatcagaatcgaatgtagggtgcccgaatacgggtggacaacacaaaaggtgttccatttcctcaacttcctcgtgaacggcggtgggtaacgagctgttttttttttttctttgcctatgttagatgttcggtctggtactcttgtcgattgatctatgacaatgcttgttgtttgtgtttgcagtgcgatccatagtgtttgtgctgcgacgaaatgtgcagctcatacatccagaggtttgtgaattgttgctaatttgatgatcagattgatgctgcagttcatttaagttatggtggtattaagcaatattctaccgcagatacttcaacatgtgcttctagatatgcccgggctcgcattcttcacgacgtatgcacttttggtgctcttctgggccgagatttattatcaggtgctaggctggtttgatctttgtagttccctgtgacatttcatcagtgcctttagcacctcctaatttgtgaaattttccactaggcgcgtgcaatgtccactgatgggcttaggccaactttctattggatcaatgctgtgatctatgcaattcaggtgtgtactgtataagatctcatgttgcacttgatggtttagaactttagatgaattaatacgcatgtgaaacgtactgcttgaggtgcttggtattatgttgtgtggaccgttgaattcagctgccttaatgttgcgtagaataaagttcggacactgaaattctttcagatggttatgatggtggtgcttatgaccaatcagattgaaggtagttgtagacataattgctgtactttcttgcccattacacctttcagtttctcaactgatggatacagtaaggcacatttacctgatatagaaaatgattgatagaagtaccagattccttttaataccaaccactagcaagtacatgatataattgatctttgattttacgatgaaaagatatccccaattccccattaaacaaccttcctaatgtgtcatacaatgggctgggatgttgggatatctgattgtatatgtttatgggaactggaacacattgaagatgttcctggtttaattattggggaatgcaatccatctgtcttatctatttctgagctaacacatgaaaacaaggagcatattgcttacgcatgaaatgatttgattattcattactttcagataatattatggatggttctatggtggaaaccagttcgagttatgatcatcttgtcgaagatgttctttgcaggtagaatttatgtttgcttttcctctccagcaattcatatgttttaagtgaacataggaaatttagggcatatgcatccatcatttctactatgctgtttagttatgttagttatcaactaaagagtattatctgagtgaaagcttatggaaagtattaacagatctactgtagagtgtcgaccaggagcaataggagtaagcatagcgtgctaaagttaattttggaaaccaccttcatataagtctttagtttctggttagggagatatctaagtagcacatgacaaagctttaataaattcaggcacactaaattgttaaatactttctgataactacttcatcttttcagctaataatatgctatattttaatttttaggtgtatcactgtttgcggcttttgggtttcttctctacggtgggaggtaatacttctctagctacagtactgctctgatagagtgatgctctcttgttgtactgtttggatggtaaactagatctggtcacaacagaaaaaaacatggggccatttttgtaccatatgacaaattaaccatatgatgcaacatgatatgaccacactattgccctgtcagattgtaagctgttctatgcttatattacttggatggtgaacttctagccttcttttgcattcagtaacaatgacctgctttagccgccaggatgtgtagcagcgagtatatgctagtcattgtgctgtgcagctctgttctacactagaatatatacggttatggccagtatactttccatgtaccattcatttccatattctacttaacttggtcctatctatcacttggaaaagcttgtgctgagtataggctggagtgaccatttctaacagatgatttgtcacatgatattttgtttattgctgtaggttattcctgatgttgcaacgtttcccagttgaatcgaaaggacggcgcaagaaattgcaggaggtatacttgcttttcattagtctgaaatttggaggctagtttacgacaaattttatgtttaacatatgttattccttcctgtaggttggctatgtgactacaatctgctttacttgtttcttgatcagatgtgtcatggtaagtgtgtagaatttctttggagtctttgaaagaatttagcttgctgaaacaggagagaaatactaagttgagccttgtcttgcagatgtgtctcaacacatttgataaagcagctgaccttgatgttctgaaccatccgattctgaatttcttttattacttggtatgtcttgattcatttatttcctacttggtatgcttttgttcgtttatattgtcaaaatgttaagcattcaacttatgcagtatgacttacgacaacttttagattttgttatgactaagcaaattatgaaggtatcgagatgagggcagaacttaacaaaggagcatggataatgtgatgttgataatatagtacagtttgcatatgaagaacaataccatatctgactcaatgcggcacgaatgccagctttgtattagagggattttgcgaatattctaaaagaaaaataaatcataccacgggatagctccagaagtatcatatatatttgtttactgttcttatatactaacaaaattctctaatttttttggcagctggttgagatcgtaccttcagctttggtgctattcatcctaaggaaactgccaccgaaacgggggatcacacaatatcatccaattcattagagcagccctggcagggacagaagaggttttcttatgagtagtctatacagcgtggtaaatacagaaaaggcaatgtgaaagataccacacttgctttcgagcttgccccagcttttgtaagaggaagcctttagaatctcagggtaccatcgtgtgtaaaaatgcaatctggtgttgttacagatttagaaagtgttaacttatatatatatatatacctttgttcttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0537500, RefSeq:Os10g0537500