BGIOSGA029506

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Revision as of 09:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029506| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029506, complete gene.| tag = OS09G04...")
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Gene Name

BGIOSGA029506

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029506, complete gene.

LocusTag

OS09G0498800

Ensembl Transcript ID

BGIOSGA029506-TA

Ensembl Protein ID

BGIOSGA029506-PA

Length

2858

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17928187..17931044

Sequence Coding Region

17930928..17931044,17930461..17930549,17930186..17930234,17929932..17930076,17929784..17929851
,17929542..17929627,17928702..17929284,17928187..17928465

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17928187..17931044 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17928187..17931044 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTCGACCCGCGCCAGGTGGTGGCCGGGTTCCTGACCCTGTCCATGTTCGTCATGCTCGGCAACATGATCAAGCACGACCACTTCACCCCCGTCGGCGCCGGCCAGGAGGAGCACGTTGTCTGCAGTCAAAAAAGAATCCGAAGCTCGATAACCGTGAAGAATAGCACTAAATTATATGCCTTCAGCCTTCCTAAAGAAAGATTTTTGGAATCTTTTACTACAGTGTTCATTTTGTCCAATGCTCAACTGTTGGGCTTGGAGGCAACAGGCATAGAATCAAACGAAATTAAAATTGCAGATACTACTGAAATGAGTAAGGTCAACAAGGCTGGAGTGGATCTCCCAAAGGAGACTGCTGAGGAGATTAGACCCTGCTGGTCTAAACCAAGATCAAATGTTCAGGAGTCTAAGGGTTTTGTTACATTCTCATTGACTATGGGCCCTGAATACCACATCTCACAGATTACTGATGCTGTGGTTATCGCAAGATATTTAGGTGCAACACTTGTGCTTCCAGAAATTAGAGGAAATGAGTTAGGAAAGAGGCGGAAATTCGAAGACATGTATGATGTGGATAAATTCATGACGAGCTTGGATGGAGTTGTCAAAGTAGTACATTCACTTCCTAATGCAGTGTCTTCTAAGAAGCCAGCAGTAGTTAGAGTACCAAACCGGGTGACTGAAGAGTTCATCACGGGAACCATTGAGCCGATCTTCCAAAGAAATAACTACTTACGACTTGCGACTATTTTCTCTTCAGTAAGTTTGAAACAGAAGGAGTCGGGTAACAAGGACTTGGATTCGACTGCCTGCCTTGCAATGTTCAGTGGCCTTCAGTTGAAACCTGAATTTTCAGCAGTAGCCAAGCATATGTTGGACAAGCTTAAAGAAATAAGCGAGAAATCCGATGGGATGGTTATAGCTATTGATTTACAGACCGAATTGCTAGAAAAGAAGATCTGTAAGACGAATGGAGGTGCAAGAAGAAGAGGCTGTTATTACCCTCAGGAAGTTGTGCACTTCCTGAAGAAGGTTGGCTTCTCTGCTGATACAACCATCTACTTGACGGAGACATGGTGGCACAAAAGCCTGGATACTCTGAAGGAGGCATTTCCAAACACTTATACCAAGGATGATATAATGCCGGCCGCTAACAAAGGCGAGTTCCTGAAATCCGGGGATTCATACCTTGCAAGAGCACTAGACCTCAAAATCTGCTCGGAGAGCGACGTGTTCGTCCCTGCCATCCCCGGCCTGTTCTACGGACATGTCGCCGGTAAGAGGATCGCTGCAGGCCTGACAAACATCATAGTTCCTGCTCCAGTGTCCAGCAGTTCAGCTCTGGCTTCAGAGTTCGTCTCCACATACGTGTCCAAGAAGAGCCATCTTGCCTACTCATGTTACTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAVDPRQVVAGFLTLSMFVMLGNMIKHDHFTPVGAGQEEHVVCSQKRIRSSITVKNSTKLYAFSLPKERFLESFTTVFILSNAQLLGLEATGIESNEIKIADTTEMSKVNKAGVDLPKETAEEIRPCWSKPRSNVQESKGFVTFSLTMGPEYHISQITDAVVIARYLGATLVLPEIRGNELGKRRKFEDMYDVDKFMTSLDGVVKVVHSLPNAVSSKKPAVVRVPNRVTEEFITGTIEPIFQRNNYLRLATIFSSVSLKQKESGNKDLDSTACLAMFSGLQLKPEFSAVAKHMLDKLKEISEKSDGMVIAIDLQTELLEKKICKTNGGARRRGCYYPQEVVHFLKKVGFSADTTIYLTETWWHKSLDTLKEAFPNTYTKDDIMPAANKGEFLKSGDSYLARALDLKICSESDVFVPAIPGLFYGHVAGKRIAAGLTNIIVPAPVSSSSALASEFVSTYVSKKSHLAYSCYC</aaseq>

Gene Sequence

<dnaseqindica>1..117#496..584#811..859#969..1113#1194..1261#1418..1503#1761..2343#2580..2858#ATGGCGGTCGACCCGCGCCAGGTGGTGGCCGGGTTCCTGACCCTGTCCATGTTCGTCATGCTCGGCAACATGATCAAGCACGACCACTTCACCCCCGTCGGCGCCGGCCAGGAGGAGGTTCGTGCTTCTTGATTCCTTCCCTTTCCCGTGGAGATCTCTCTCGTCTTTAGCTAATTGCTCTTCCAGGTTCTTGGTCTCTGCGTGAGGAATTCTTTCTTTCGCTGTTGATTTAGCTCACTCTCTTTGTCCGGGTTTCTTTGGTTCGGAGAGTAGTTCAGATGAAGGGATTTAGTAGCTGTTCGTGTTGATTTGGCTCGCCGGTGGAATGCAGGAGTGTGATTATGATTTGGGTTTCTTTGTTTTTGTTTTAATTCTTGGATAATTGCAAGCGATCTGTGGATCTAGTGGTGAAGGGGATCTTGAACGTCTTGTGACCTTGACTTTCATTAGGGGTTAACTGGGGTTTATATTAATTATTACCTACTAGTCGATCAGCACGTTGTCTGCAGTCAAAAAAGAATCCGAAGCTCGATAACCGTGAAGAATAGCACTAAATTATATGCCTTCAGCCTTCCTAAAGAAAGGTTAGTTGGTGGGGGACACATCATCAGTAAAGAGAGCATCAATTGCAAAGATGAAACCAAAGGAGGAAATACAGTACATCGTTTTTAATCTCTTTGGATAGTGATAGTTATCATTATGAACTTGATATGGCAGAGAGAGCTCAGTCTCTCCAGGAAGCAAATCATGTGCGATTGTGTCATGAGCTTACTTGTTCTGATTCTTGTATGCAAATCATTGATGTGCCAGATTTTTGGAATCTTTTACTACAGTGTTCATTTTGTCCAATGCTCAACTGGTATGAGTCAATTGACACTGTCCCAAGCTTCCAGTGATGAACGATTCTTTTGAACTGACTAAATTTAAACTGGGCATTATATGACTGACCCCAATTTGAAAACCAACAGTTGGGCTTGGAGGCAACAGGCATAGAATCAAACGAAATTAAAATTGCAGATACTACTGAAATGAGTAAGGTCAACAAGGCTGGAGTGGATCTCCCAAAGGAGACTGCTGAGGAGATTAGACCCTGCTGGTCTAAACCAAGATCAAGTAAGTAAAATATATTCTTGACAAGTTCTTTAGATCCCAACTCTTGAGTCTTGACACATTGGCACTTGTAATTTCTGCAGATGTTCAGGAGTCTAAGGGTTTTGTTACATTCTCATTGACTATGGGCCCTGAATACCACATCTCACAGGTGAGCTTGCAACTCAGAGCTCATATGTATAGTTAATTACTATATGTAAGAAAAACAAGTTTTGTGTCTGCATATTCTGTTTGATTGAATTGCTGGAACCCCGCTTGAAATTTTCAGGACCATGGTTTTTCTTACTGAATATACTTCTGTCTGCAGATTACTGATGCTGTGGTTATCGCAAGATATTTAGGTGCAACACTTGTGCTTCCAGAAATTAGAGGAAATGAGTTAGGAAAGAGGCGGTATGTTTCATTGCTAGAACCTTACACTTTTCCCCCCTCAAAACTGCACAAGGCTATCGGCTATTGCTATCTTGTATTCATATTTACTTTAGATATACTGAAGAATTTCAAAACTACAAGCTTTTCTTTTCCAATTTATAAAATCTTCCACAATTTGTTTACAATTCCTTTCATGAATTCATTAAAAAAAACGTTTCTTCTATAAACATGAAAAATATGTCATTCATTTGCACTAATGATACAAGGAATATACACAGGAAATTCGAAGACATGTATGATGTGGATAAATTCATGACGAGCTTGGATGGAGTTGTCAAAGTAGTACATTCACTTCCTAATGCAGTGTCTTCTAAGAAGCCAGCAGTAGTTAGAGTACCAAACCGGGTGACTGAAGAGTTCATCACGGGAACCATTGAGCCGATCTTCCAAAGAAATAACTACTTACGACTTGCGACTATTTTCTCTTCAGTAAGTTTGAAACAGAAGGAGTCGGGTAACAAGGACTTGGATTCGACTGCCTGCCTTGCAATGTTCAGTGGCCTTCAGTTGAAACCTGAATTTTCAGCAGTAGCCAAGCATATGTTGGACAAGCTTAAAGAAATAAGCGAGAAATCCGATGGGATGGTTATAGCTATTGATTTACAGACCGAATTGCTAGAAAAGAAGATCTGTAAGACGAATGGAGGTGCAAGAAGAAGAGGCTGTTATTACCCTCAGGAAGTTGTGCACTTCCTGAAGAAGGTTGGCTTCTCTGCTGATACAACCATCTACTTGACGGAGACATGGTGGCACAAAAGCCTGGATACTCTGAAGGAGGCATTTCCAAACACTTATACCAAGGCAAGAAAACTCTTTCACCAATTTTTTAGTTTGTATGAATCGTCATCCATCTTCTCCCCCCCAACAAAATTTACTGAATGCTACACTGAAAAGCTATTCATAGAGAAACACACTTAAAGTTCAGACTGAATTTGATCGTTGGCTTGTGATTCCAACTTGTGACATACATCAGTTTTTTTTTAATAAGTATAAACCGAGCTGGCGGAATTCTTGACACATAGTTATCATTCTTGCAGGATGATATAATGCCGGCCGCTAACAAAGGCGAGTTCCTGAAATCCGGGGATTCATACCTTGCAAGAGCACTAGACCTCAAAATCTGCTCGGAGAGCGACGTGTTCGTCCCTGCCATCCCCGGCCTGTTCTACGGACATGTCGCCGGTAAGAGGATCGCTGCAGGCCTGACAAACATCATAGTTCCTGCTCCAGTGTCCAGCAGTTCAGCTCTGGCTTCAGAGTTCGTCTCCACATACGTGTCCAAGAAGAGCCATCTTGCCTACTCATGTTACTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029506