Os10g0537600

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0537600| Description = Conserved hypothetical protein| Version = NM_001071710.1 GI:115483163 GeneID:4349244| Length = 4463 bp| Definition ...")
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Gene Name

Os10g0537600

Description

Conserved hypothetical protein

Version

NM_001071710.1 GI:115483163 GeneID:4349244

Length

4463 bp

Definition

Oryza sativa Japonica Group Os10g0537600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21396043..21400505

Sequence Coding Region

21396268..21397629,21398046..21398226,21398317..21398572,21399223..21399550,21399673..21400503

Expression

GEO Profiles:Os10g0537600

Genome Context

<gbrowseImage1> name=NC_008403:21396043..21400505 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21396043..21400505 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtgacattgtcttatttggtaacaaggaccgtctgcacatcggaaaggagttgtcaaaagtatatttggatgatcgtgtccataagctgctgaggtatttcaaacgagaagatggttggaaggcacgtgtggattctgtcatgaaattccttatgaattgcatttctcgttaccaaatgtccctagatatacagcaggcaagcagtgatggatgcaatcttacctttaagaagtatttcacaagtaaattcagcacattagtaaaagaattagcaaggtgtattgatacattctttgatcatcttccaactgattccctgggcaggaatttggacaggatgatgtttgccaaaagtttgttagataaattgcaacaactgctgtgtgcagatgatgtctctgatgagcttcttttcacaattttcaagccttccgatgaacctattgactcttttgatagccatgaccagacagatgatgcaactgttgatcttcatgaccatgatatctccctagatgaccctttggagataaagtctctttgtatcaaaaccctgatggatctttcaaaaatgcggcttccttgtgaagacaatgagagttcgattcgggacttatgcttgaaacgagcgaaactggtattctgcactgcttctagttcatttgagttgttcaggttgcaaaacgtgatgcctataagcatcttggttattgatgaggcagcacaactaaaagaatgcgaagcactggttcctctcttgctcccagggatagagcacattctgctgattggagatgaaaaccaattatcatcattggtaaagagtaagattgctaaagatgctgactttggccgaagtctctatgagagattgtgtacaatgggttatagaaagcatttgctggaagtacaatataggatgcaccctggcatcaacaaatttccaaatgccaacttttatgataaccgaatttctgatggtcccagtgtccaacaggaagactatatgaagagttatctccctggccctatttatggtgcttattcattcattcatattgaaaacgatatggaaatgcttgatgaacttggccagagttccaaaaatatggttgaggttgctgtagcgaccaatattgttgaaagacttgcaaaagagtgctctgagaagaggcagcgaaccagccttggtgtgatatctccatatactgcccaagtaattgcattgcaagaaagacttggaaaacagttcaagaatcatgagtttctgtctgttacagtaaaatccattgatggatttcaaggtggagaggaggacataatattgatttcaaccgttaggtccaacaaaaatggcaaagtaggattcctctcggatgctgggagaattaatgtggctctgacaagagcaaagtattgcctttggatccttggaaatggagccactttgctggcaagcaattcaatatgggcagaattagtccatgactcaaaacgacgtggatgtttctttaatgcccttgacgacaagaatttagcagaaataattatgcatgcaaccaaggagggagagcagaggaaccaaagagaacagaggagtgcccacaatgcaaatcgatggtcatcagggtcatcgaggcatgacataattgctgctggcaacagtcgaccaatgagatggagtcactttccaggttctggaaacacaaggagaagcaatggccacgattcacgactaaatgtgtgtcacacaaaagaggacatgcatagaacacactttcagcaacgcaagtcctatagtggtgactattcacaagttgctcctcctaatcaatattggcacaatggcaacagaccatcccgtggcagttatggttatctggaagtgtttagagaacatccaaatcatcattctggtcaggactcacgtactagaagttatcatgaaaccatgtgcagtactcctcaaacaggcaatgggaggtttccttattctggatcaattcagagggagaaatcacagaggcaaactagtatccttggtgaacggcaacctttaggaggtgacggcaataaaggatttcaggatgggacttctggttatccatgccggcgcaattcttctcaaattaggccaaatacatatgaagccggtgctcctgaacttcaaagtatgaataagcacagggagttcagtagttatccacaacaagcaccatataggacttttggtggtcggggtagagggagacctacatatcatggtagaggtaggggaggatggtatgaacggaccaataaccattggatggaagaacctcatcaggtgcagaatgccacctgtaacatgccagttactatgcagcaagggatgaaaagaaactggtgcgaagcagaagcatcagattcaccccagcaggtcaatgcaaaaataagatccgaaagtgcagatcgacctcatttgcatgacgaacatggaggttatggaactgcatctcaccaactgcctgcaattaagcccgaagatgtttccgagcagcagtgtgagatgaaaacagacagctataaggcagaagcatcagaatcaccaaatgacagcacaagagtaaggcctgaaagtgtagagcaaccttattgtcaggcacagggtgacagttctggagctgcttcccaggaaccggttatccctgagcagagagggatgtcaggtgacttgtgcgaagcagtatgccaccagagcaacacgtcaggttcaccaaacaggggcagtactgaagtaacactcgaaggtgcagaacaacctcattgccaggcgcagcctgacggttcgggagttgcttcaaatgaagcgcctgttcctgaacagcgatggacggaaggggacttgggtgaagcagcagaacctggccagggcaatgcagaaaataaagctgaaagtgcagaggcagatagctag</cdnaseq>

Protein Sequence

<aaseq>GDIVLFGNKDRLHIGKELSKVYLDDRVHKLLRYFKREDGWKARV DSVMKFLMNCISRYQMSLDIQQASSDGCNLTFKKYFTSKFSTLVKELARCIDTFFDHL PTDSLGRNLDRMMFAKSLLDKLQQLLCADDVSDELLFTIFKPSDEPIDSFDSHDQTDD ATVDLHDHDISLDDPLEIKSLCIKTLMDLSKMRLPCEDNESSIRDLCLKRAKLVFCTA SSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKS KIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQE DYMKSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKR QRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSN KNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRGCFFNAL DDKNLAEIIMHATKEGEQRNQREQRSAHNANRWSSGSSRHDIIAAGNSRPMRWSHFPG SGNTRRSNGHDSRLNVCHTKEDMHRTHFQQRKSYSGDYSQVAPPNQYWHNGNRPSRGS YGYLEVFREHPNHHSGQDSRTRSYHETMCSTPQTGNGRFPYSGSIQREKSQRQTSILG ERQPLGGDGNKGFQDGTSGYPCRRNSSQIRPNTYEAGAPELQSMNKHREFSSYPQQAP YRTFGGRGRGRPTYHGRGRGGWYERTNNHWMEEPHQVQNATCNMPVTMQQGMKRNWCE AEASDSPQQVNAKIRSESADRPHLHDEHGGYGTASHQLPAIKPEDVSEQQCEMKTDSY KAEASESPNDSTRVRPESVEQPYCQAQGDSSGAASQEPVIPEQRGMSGDLCEAVCHQS NTSGSPNRGSTEVTLEGAEQPHCQAQPDGSGVASNEAPVPEQRWTEGDLGEAAEPGQG NAENKAESAEADS</aaseq>

Gene Sequence

<dnaseqindica>2877..4238#2280..2460#1934..2189#956..1283#3..833#ttggtgacattgtcttatttggtaacaaggaccgtctgcacatcggaaaggagttgtcaaaagtatatttggatgatcgtgtccataagctgctgaggtatttcaaacgagaagatggttggaaggcacgtgtggattctgtcatgaaattccttatgaattgcatttctcgttaccaaatgtccctagatatacagcaggcaagcagtgatggatgcaatcttacctttaagaagtatttcacaagtaaattcagcacattagtaaaagaattagcaaggtgtattgatacattctttgatcatcttccaactgattccctgggcaggaatttggacaggatgatgtttgccaaaagtttgttagataaattgcaacaactgctgtgtgcagatgatgtctctgatgagcttcttttcacaattttcaagccttccgatgaacctattgactcttttgatagccatgaccagacagatgatgcaactgttgatcttcatgaccatgatatctccctagatgaccctttggagataaagtctctttgtatcaaaaccctgatggatctttcaaaaatgcggcttccttgtgaagacaatgagagttcgattcgggacttatgcttgaaacgagcgaaactggtattctgcactgcttctagttcatttgagttgttcaggttgcaaaacgtgatgcctataagcatcttggttattgatgaggcagcacaactaaaagaatgcgaagcactggttcctctcttgctcccagggatagagcacattctgctgattggagatgaaaaccaattatcatcattggtaaagagtaaggtatgccattggtatgggataatatacatggacatgttctcttttattatgagtatattgttgccaataattattctgacttctatagctttgctcatactgtctccttactgctactctagattgctaaagatgctgactttggccgaagtctctatgagagattgtgtacaatgggttatagaaagcatttgctggaagtacaatataggatgcaccctggcatcaacaaatttccaaatgccaacttttatgataaccgaatttctgatggtcccagtgtccaacaggaagactatatgaagagttatctccctggccctatttatggtgcttattcattcattcatattgaaaacgatatggaaatgcttgatgaacttggccagagttccaaaaatatggttgaggttgctgtagcgaccaatattgttgaaagacttgcaaaaggtacatctaagggctaaggcctcagttttcacatagttgttgaaagaaataagtttaaatatggcttgccacatagataacctgcttgctgttgtttgataagctgctgacttgctcaatatattttattagagcttcgacactagctattatataaacttttaagatggtttcctacatacataatttcaaggctgtctgtacacatttccatcagcaccagtgttttcttctttgaacagtctgttgataatggaaataggttgagaataacacaataaataaatgcgatattttttttttgctttcctttggtattgtgctggacatatgatgaaaataggtgtcgggtgaccatgtcctatccatcagaatcaaaatgttggatattccatgatgctaagtgttcaaggaaacatgcatatatgaagtttgattttttttttttgcaactaatttaaagccatacatgaaatacgagtaacatgcttagttggttagtttcatactttgcatttgtttgggtgaaattctttctattttgataataagaatattctgaaaatgatacttttatgaacttgatttaaccatgcctctggattggataaagctaacaaatgtttgtatggttcccaaaactattgtagagtgctctgagaagaggcagcgaaccagccttggtgtgatatctccatatactgcccaagtaattgcattgcaagaaagacttggaaaacagttcaagaatcatgagtttctgtctgttacagtaaaatccattgatggatttcaaggtggagaggaggacataatattgatttcaaccgttaggtccaacaaaaatggcaaagtaggattcctctcggatgctgggagaattaatgtggctctgacaagagcaaagtatgttgtcttaatttagtaacagattaatttcaattcaatatttccactgcttgtaatttcaaaagcttactattttcttggcctcaggtattgcctttggatccttggaaatggagccactttgctggcaagcaattcaatatgggcagaattagtccatgactcaaaacgacgtggatgtttctttaatgcccttgacgacaagaatttagcagaaataattatgcatgcaaccaaggagggagagcagaggaaccaaagagaacaggtaataaagtggaacattttcttttgtcggaaggtaggacttatcatgtttattagggacatatggttactaaaagcttgcgatggttccctccaacacatatgggtgaggagagactgtcctgctgctcctggtgaagcaatgcaggccttgaagtgtgctgggtgtggtgccagtagcaaatactttctgatcttgttagaacctgttctttgtgaccccaatttcctaaaagctaattattttgttgtttctagtcctttattcagtcacatgagcagttcatgttatttaggaataatgtcctttatacacctttggcaattggagctgttaataagattaacatgctgacatatttcttgcaaaaagttctcttattttgaaatccttacaattatttgtttacttgtcagaggagtgcccacaatgcaaatcgatggtcatcagggtcatcgaggcatgacataattgctgctggcaacagtcgaccaatgagatggagtcactttccaggttctggaaacacaaggagaagcaatggccacgattcacgactaaatgtgtgtcacacaaaagaggacatgcatagaacacactttcagcaacgcaagtcctatagtggtgactattcacaagttgctcctcctaatcaatattggcacaatggcaacagaccatcccgtggcagttatggttatctggaagtgtttagagaacatccaaatcatcattctggtcaggactcacgtactagaagttatcatgaaaccatgtgcagtactcctcaaacaggcaatgggaggtttccttattctggatcaattcagagggagaaatcacagaggcaaactagtatccttggtgaacggcaacctttaggaggtgacggcaataaaggatttcaggatgggacttctggttatccatgccggcgcaattcttctcaaattaggccaaatacatatgaagccggtgctcctgaacttcaaagtatgaataagcacagggagttcagtagttatccacaacaagcaccatataggacttttggtggtcggggtagagggagacctacatatcatggtagaggtaggggaggatggtatgaacggaccaataaccattggatggaagaacctcatcaggtgcagaatgccacctgtaacatgccagttactatgcagcaagggatgaaaagaaactggtgcgaagcagaagcatcagattcaccccagcaggtcaatgcaaaaataagatccgaaagtgcagatcgacctcatttgcatgacgaacatggaggttatggaactgcatctcaccaactgcctgcaattaagcccgaagatgtttccgagcagcagtgtgagatgaaaacagacagctataaggcagaagcatcagaatcaccaaatgacagcacaagagtaaggcctgaaagtgtagagcaaccttattgtcaggcacagggtgacagttctggagctgcttcccaggaaccggttatccctgagcagagagggatgtcaggtgacttgtgcgaagcagtatgccaccagagcaacacgtcaggttcaccaaacaggggcagtactgaagtaacactcgaaggtgcagaacaacctcattgccaggcgcagcctgacggttcgggagttgcttcaaatgaagcgcctgttcctgaacagcgatggacggaaggggacttgggtgaagcagcagaacctggccagggcaatgcagaaaataaagctgaaagtgcagaggcagatagctagacttttgagatcagatacagacatatagatttccagtcctttttttttttgctctgtataggatagtgttcccccttttggtttatatccccaaaatgtgtataagcaagcacgtggtgtgtaaatctttttggctcctcgacagtagggagaacctaggaaccaacctgggaagcaatatgtaaaagactagaaggtagctcaataaaaaggaaaagaaagcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0537600, RefSeq:Os10g0537600