Os10g0537800

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0537800| Description = Peptidase A1, pepsin family protein| Version = NM_001071711.1 GI:115483165 GeneID:4349245| Length = 1404 bp| Defini...")
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Gene Name

Os10g0537800

Description

Peptidase A1, pepsin family protein

Version

NM_001071711.1 GI:115483165 GeneID:4349245

Length

1404 bp

Definition

Oryza sativa Japonica Group Os10g0537800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21412165..21413568

Sequence Coding Region

21412227..21413411

Expression

GEO Profiles:Os10g0537800

Genome Context

<gbrowseImage1> name=NC_008403:21412165..21413568 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21412165..21413568 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaggccagtggcaacgctgctggtgctgtgcttcatctctgtcacggcgcgcgccgccgcgttccgcgtgcacggccgcctcctcgccgacgccgcgacggagggaggcgccgtcgtgcccatccactggacccaggcaatgaactacgtcgcgaacttcaccatcggcacgccgccgcagccggcgtcggcggtcatcgacctcgccggggagctcgtctggacgcagtgcaagcagtgcggccgctgcttcgagcagggcacgccactgttcgacccgaccgcgtcgaacacctaccgggcggagccgtgcggcaccccgctctgcgagtccatcccgagcgacgtccgcaactgctccggcaacgtgtgcgcgtacgaggcgtccaccaatgccggggacaccggcggcaaggtcggcaccgacaccttcgccgtcgggacggccaaggcgagcctcgcgttcgggtgcgtcgtggcgagcgacatcgacaccatgggcgggccttccgggatcgtcgggctagggaggacgccgtggtcgctagtcacccagacgggcgtcgccgcgttctcctactgcctggcgccgcacgacgccgggaagaacagcgcgctgttcctcggctcctccgcgaagctcgccggcggcggcaaggccgcctcgacgccgttcgtcaacatctccggcaacggcaatgacctgagcaactactacaaggtccaactcgaagggctgaaggccggcgacgcgatgatcccgctgccgccgagcggcagcaccgtcctgctcgacaccttctcgccgatcagcttcctcgtcgacggcgcttaccaggccgtcaagaaggcggtgacggtcgccgtcggcgcaccgccgatggcgacgccggtggagccgttcgacctctgcttcccgaaatcgggggcgagcggcgcggcgccggacctcgtgttcacgttccggggcggcgccgccatgacggtgccggcgacgaactacctgctcgactacaagaacggcacggtgtgcctcgccatgctgagctcggcgcggctgaactcgacgacggagctgagcttgctgggaagcttgcagcaggagaacatccatttcctcttcgacctcgacaaggagacgctctccttcgagcctgcagactgcactaaactctcctag</cdnaseq>

Protein Sequence

<aaseq>MGRPVATLLVLCFISVTARAAAFRVHGRLLADAATEGGAVVPIH WTQAMNYVANFTIGTPPQPASAVIDLAGELVWTQCKQCGRCFEQGTPLFDPTASNTYR AEPCGTPLCESIPSDVRNCSGNVCAYEASTNAGDTGGKVGTDTFAVGTAKASLAFGCV VASDIDTMGGPSGIVGLGRTPWSLVTQTGVAAFSYCLAPHDAGKNSALFLGSSAKLAG GGKAASTPFVNISGNGNDLSNYYKVQLEGLKAGDAMIPLPPSGSTVLLDTFSPISFLV DGAYQAVKKAVTVAVGAPPMATPVEPFDLCFPKSGASGAAPDLVFTFRGGAAMTVPAT NYLLDYKNGTVCLAMLSSARLNSTTELSLLGSLQQENIHFLFDLDKETLSFEPADCTK LS</aaseq>

Gene Sequence

<dnaseqindica>63..1247#aatcaagcatcaatccctcattagcatcgctggttgatactaaactaacagtagccataatcatgggaaggccagtggcaacgctgctggtgctgtgcttcatctctgtcacggcgcgcgccgccgcgttccgcgtgcacggccgcctcctcgccgacgccgcgacggagggaggcgccgtcgtgcccatccactggacccaggcaatgaactacgtcgcgaacttcaccatcggcacgccgccgcagccggcgtcggcggtcatcgacctcgccggggagctcgtctggacgcagtgcaagcagtgcggccgctgcttcgagcagggcacgccactgttcgacccgaccgcgtcgaacacctaccgggcggagccgtgcggcaccccgctctgcgagtccatcccgagcgacgtccgcaactgctccggcaacgtgtgcgcgtacgaggcgtccaccaatgccggggacaccggcggcaaggtcggcaccgacaccttcgccgtcgggacggccaaggcgagcctcgcgttcgggtgcgtcgtggcgagcgacatcgacaccatgggcgggccttccgggatcgtcgggctagggaggacgccgtggtcgctagtcacccagacgggcgtcgccgcgttctcctactgcctggcgccgcacgacgccgggaagaacagcgcgctgttcctcggctcctccgcgaagctcgccggcggcggcaaggccgcctcgacgccgttcgtcaacatctccggcaacggcaatgacctgagcaactactacaaggtccaactcgaagggctgaaggccggcgacgcgatgatcccgctgccgccgagcggcagcaccgtcctgctcgacaccttctcgccgatcagcttcctcgtcgacggcgcttaccaggccgtcaagaaggcggtgacggtcgccgtcggcgcaccgccgatggcgacgccggtggagccgttcgacctctgcttcccgaaatcgggggcgagcggcgcggcgccggacctcgtgttcacgttccggggcggcgccgccatgacggtgccggcgacgaactacctgctcgactacaagaacggcacggtgtgcctcgccatgctgagctcggcgcggctgaactcgacgacggagctgagcttgctgggaagcttgcagcaggagaacatccatttcctcttcgacctcgacaaggagacgctctccttcgagcctgcagactgcactaaactctcctagctaatcaatggctgctgctacttaattactttcttcatatgtatgtgtacttctgaataacgcagccttgcggcatgagctgcagcatgctcatgttggtgaaaataatactccattcttattattattctgtggcgatctggcctacttcgatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0537800, RefSeq:Os10g0537800