Os10g0539400

From RiceWiki
Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0539400| Description = Similar to MCE-FAMILY PROTEIN MCE2C| Version = NM_001189324.1 GI:297727778 GeneID:9269470| Length = 1735 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0539400

Description

Similar to MCE-FAMILY PROTEIN MCE2C

Version

NM_001189324.1 GI:297727778 GeneID:9269470

Length

1735 bp

Definition

Oryza sativa Japonica Group Os10g0539400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21471892..21473626

Sequence Coding Region

21472838..21473584

Expression

GEO Profiles:Os10g0539400

Genome Context

<gbrowseImage1> name=NC_008403:21471892..21473626 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21471892..21473626 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccccaccttctctctccccgaagcaatcgaaatcggcgcggtgtgaaaccaaccacgccggtggatccacggcggcgcgcgcacccccgccaccgacgattgccggcgacgcgccgacgccgggagggagggagggagggagggagggagaccccgcacctgccgcttgccgctccgctgttcccatcccgctcccacctcgccgcccgcctccccccaccaacctctcctctcccctacttctcgcttccgctccacgcctcgctgcctgccgctccaccgatcgctcgctcgcttcccgcgatctcgcctccgagagcagatctggtggcggggcgtcgggccccgtcggccgatggtttccgccgcggcgcaggcgggcgtggtcgccgcgtgcgtcgtgctgttcgtccccatggggctcgccgggtggcacctcagccggaacaaggtgctcttcttctccggggcgctgttcgtctcgctcgccgtcggggtacacctctcgccttacctcccttccctcccgcacctcctcctcgccgcatccttccacccccatcccatctcgtcgtcgtcgtcgtcttcggccgcctcctcctcgtgcgtgcctctcctgcaccgcgtgtcatgggcggacgcgggtggggaatcgggcgtcggtagggcgtgggcgtggccgccgtcgctggcgtcgacctgcggcctcgcgcggctgtcgcgggacgacgcgtcgctgctgctga</cdnaseq>

Protein Sequence

<aaseq>SPPSLSPKQSKSARCETNHAGGSTAARAPPPPTIAGDAPTPGGR EGGREGDPAPAACRSAVPIPLPPRRPPPPTNLSSPLLLASAPRLAACRSTDRSLASRD LASESRSGGGASGPVGRWFPPRRRRAWSPRASCCSSPWGSPGGTSAGTRCSSSPGRCS SRSPSGYTSRLTSLPSRTSSSPHPSTPIPSRRRRRLRPPPPRACLSCTACHGRTRVGN RASVGRGRGRRRWRRPAASRGCRGTTRRCC</aaseq>

Gene Sequence

<dnaseqindica>43..789#agcagtgattaatggaacagaagtcatccatccatccactgatccccaccttctctctccccgaagcaatcgaaatcggcgcggtgtgaaaccaaccacgccggtggatccacggcggcgcgcgcacccccgccaccgacgattgccggcgacgcgccgacgccgggagggagggagggagggagggagggagaccccgcacctgccgcttgccgctccgctgttcccatcccgctcccacctcgccgcccgcctccccccaccaacctctcctctcccctacttctcgcttccgctccacgcctcgctgcctgccgctccaccgatcgctcgctcgcttcccgcgatctcgcctccgagagcagatctggtggcggggcgtcgggccccgtcggccgatggtttccgccgcggcgcaggcgggcgtggtcgccgcgtgcgtcgtgctgttcgtccccatggggctcgccgggtggcacctcagccggaacaaggtgctcttcttctccggggcgctgttcgtctcgctcgccgtcggggtacacctctcgccttacctcccttccctcccgcacctcctcctcgccgcatccttccacccccatcccatctcgtcgtcgtcgtcgtcttcggccgcctcctcctcgtgcgtgcctctcctgcaccgcgtgtcatgggcggacgcgggtggggaatcgggcgtcggtagggcgtgggcgtggccgccgtcgctggcgtcgacctgcggcctcgcgcggctgtcgcgggacgacgcgtcgctgctgctgaatgggtcgtgggtgatggtggccggggactcgcaggcgaggttgctggtgctcgcgctgctccgcctcctgctcgacccggccgccgcggcggccgcggagccggagctgttccgccgccacagcgactaccgcgccaccgtccctgcgagggggatctccgtcgatttcgtctgggcgcccttcgagagcaacctcacgcggctgctccacgaggatctccgcctcgcgccgcgcacaccggacgtgctcgtcctcggatccggcctctggcacatgctccacgtcacggacgccgctcgctacggcgacgcattggcgtccgtcgtcgatgcggcgaagtcgctccggtcgccgctccccgtgccgccgccgcacatgttctggctcggcctgccgctgctggtgaaccacatgctcaacactgatgccaagaaagtacacatgaacgacaccattctgcaagcctacgaccttgaggtcgagcagagggggctcttgcagcgcgacggtggcccgttcctactgcttgatgtaggaaagctctcccgggggtgtgggcagcaatgcacggctgatggaatgcattatgacggcgatgtgtatgatgcggtcttgcacatcatgctcaatgcattggtgatcgagtcacaacagaggatttgattgattgggttcttgaagcaggtgtgttctcacaccctgttcttttggtccagtataatacaggggtaagtaggaattgttgtgaattaggggtgttcttttgatcgcttcaacattttggtcgcttgccagaatccatagttggattcctcaaccttagaatgtaatttaagggaatcttagaacaacactctttttctccttttctttttgggctaaatggcaagccgagctgttgtgttgtatactgtttctaggtaacaactgaaaatgatgattcg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0539400, RefSeq:Os10g0539400