BGIOSGA029552

From RiceWiki
Revision as of 09:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029552| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029552, complete gene.| tag = OS09G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029552

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029552, complete gene.

LocusTag

OS09G0487200

Ensembl Transcript ID

BGIOSGA029552-TA

Ensembl Protein ID

BGIOSGA029552-PA

Length

3049

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17454855..17457903

Sequence Coding Region

17456897..17457903,17456514..17456808,17456174..17456380,17455918..17456091,17455561..17455758
,17455357..17455470,17454855..17455202

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17454855..17457903 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17454855..17457903 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTACTGTAGAGAATATGGAAGGGAGAGAAGAGCGTTCGACTGATGTGGAACGGGATGGTAAACAAGGAAAAGAAGTTGAATCGGACTATGAACCAGCTAGAGACTCTGTTTCATCTCAGGGTGAGGCTAACAGCAATGAAGATACCAGAGCCAAAAGAGTCTCAAGGGTTCCAAAGAAGCTAGTGAAGAAAGATTCAAAGGAAAACAGCCCACGCTCAGGCAGAATTAATTCCAATCGCCAAGTGCAGACTAAGCTGCAATATATATCATCAAACAATTTGCAGAGCAAATCTCCAAAGCCAAACAAAACATCTGATGGTGCTAAAACCATTGAGATAACAAAGCCAGAAACAGTGACAGTTCCTTCTTGTCCTTCATCTGAGGTGTCTGAGGAGATGGATGATAAACCCATTGAGAATATAGTGACGGATGATAAATCCATTGAGGATGTAGCTGATGATAAGGCCACTGAGGGCACGGCCTCTTATGATAAGGCCACTGAAGGAAAAGCTGCTGATGATACGACCGTTGAGGACAACACCACTGATGAAAGGAGCATTGAGAGTGGCACTGACGATAGGACCATTGCAGGTATAGCAGCTGATGTTAAATCTAGTGAAGAGGCAAAGGAGATTGATATATTGGATGAAGCCCCAAATTGTGATCAGAGTACTGCTACTGACGAGGAAATAGCTGATACTGAAGAAAGCATAGCTTATGATGGTAAATCAGCTGCATATGAAAAGAGTGAGGAATTAGAATCTAAATGTGAAAGGTTGGAGCAGGAACTTCGAGAAGTTGCTGCCCTTGAGATTTCTCTTTATTCAGTAGTGCCAGAGCACGGTTGTTCATCGCATAAATTGCACACACCAGCTCGGCGTCTGTCCAGGCTATATGTTCATGCATCAAAGTTTTGGTCCTCTGATAAGAAAGCTTCTGTCACAAAGAACTTCGTTTCTGGGCTTGTCCTTGTTGCAAAGTCTTGTGGAAATGATGTTTCAAGGTTGACATTCTGGCTATCAAACACCGTTGTCCTAAGAGAGATCATTGCACAAACATTTGGCATTTCACGCCAACCAAGTCTTGCTATGAAGGCTTTCAGCACAAATGTTAATGCAAAGATGCTCGGTAAGAACTCTTCACCAACGCGGCGGAAAAACAACTACAGTGGCAAGCATGCTAGACCTGCTATCTGGCCATTACCTGATGATTGGCGGGAAACTGGTACACTCGTGGCTGCACTGGAGAAGATTGAATCATGGATCTTTTCTCGGATTGTTGAGTCAGTGTGGTGGCAGGCATTGACACCCCACATGCAAACACTGGTGAAAGATATATCAAGTCCAAAGGCTGGGAGTTTGTTGGGACCTGCTTTGGGTGATCAGCAACAAGGGAACTTCTCCATTCATCTTTGGAAAACTGCTTTCCAAGATGCCTTCAGCAGAATATGTCCTCTTCGTGCTGGTGGACATGAGTGTGGATGCTTACCAGTGTTGGCAAAACTGGTGATGGAGCACTGTGTAGCTCGTTTAGACGTTGCTATGTTTAATGCAGTCCTGCGTGAATCTGCAAATGAAGTACCATCTGATCCTATATCTGACCCAATTGTCGACTCAAGAGTTCTACCGATTCCAGCTGGTGACTTCAGCTTTGGATCAGGTGCACAGCTGAAGAACTCGATCGGAAATTGGTCCCGATGGTTGCAAGATAAGTTTGGCATGGTTGCTGCTGCCCCTGAGAAGCATGGTCAAGCAGGAGATGAGAGTGATGACAGAAGTGGTGCTGCTGATTTTTATTCTTTCAAGCTGCTCAACGAATTAAGTGATCTTCTGATGCTCCCAAAGGACATGCTTCTTGAAAAGTCCATCAGGAAGGAGGTCTGCCCTTCTATTGGCATTCCACTGGTAACAAGGATACTCTGCAACTTCACTCCTGACGAGTTCTGTCCTGAACCTGTTCCTGGAATGGTTTTAGAGGAGCTGAATGCCGAGAGCTTGCTGGAGCGCTTCACGGAGAAAGATGTGATCACCACATTCCCCTGCGTCGCGGCTCCTGTTGTCTACTGCCCCCCTTCACCGGAGGATGTCGCGGAGAAAGTAGCAGACGCAGGCGGGAACGCGGAGCCGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGAGGCTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAGTATATGGTCGGAGAGGCCTGGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MGTVENMEGREERSTDVERDGKQGKEVESDYEPARDSVSSQGEANSNEDTRAKRVSRVPKKLVKKDSKENSPRSGRINSNRQVQTKLQYISSNNLQSKSPKPNKTSDGAKTIEITKPETVTVPSCPSSEVSEEMDDKPIENIVTDDKSIEDVADDKATEGTASYDKATEGKAADDTTVEDNTTDERSIESGTDDRTIAGIAADVKSSEEAKEIDILDEAPNCDQSTATDEEIADTEESIAYDGKSAAYEKSEELESKCERLEQELREVAALEISLYSVVPEHGCSSHKLHTPARRLSRLYVHASKFWSSDKKASVTKNFVSGLVLVAKSCGNDVSRLTFWLSNTVVLREIIAQTFGISRQPSLAMKAFSTNVNAKMLGKNSSPTRRKNNYSGKHARPAIWPLPDDWRETGTLVAALEKIESWIFSRIVESVWWQALTPHMQTLVKDISSPKAGSLLGPALGDQQQGNFSIHLWKTAFQDAFSRICPLRAGGHECGCLPVLAKLVMEHCVARLDVAMFNAVLRESANEVPSDPISDPIVDSRVLPIPAGDFSFGSGAQLKNSIGNWSRWLQDKFGMVAAAPEKHGQAGDESDDRSGAADFYSFKLLNELSDLLMLPKDMLLEKSIRKEVCPSIGIPLVTRILCNFTPDEFCPEPVPGMVLEELNAESLLERFTEKDVITTFPCVAAPVVYCPPSPEDVAEKVADAGGNAEPDLRASMVQRRGYTSDDDLDDLGNPLASLYDRSSPPSPCNGASRSTTRQGGSMSNARYELLREVYGRRGLV</aaseq>

Gene Sequence

<dnaseqindica>1..1007#1096..1390#1524..1730#1813..1986#2146..2343#2434..2547#2702..3049#ATGGGTACTGTAGAGAATATGGAAGGGAGAGAAGAGCGTTCGACTGATGTGGAACGGGATGGTAAACAAGGAAAAGAAGTTGAATCGGACTATGAACCAGCTAGAGACTCTGTTTCATCTCAGGGTGAGGCTAACAGCAATGAAGATACCAGAGCCAAAAGAGTCTCAAGGGTTCCAAAGAAGCTAGTGAAGAAAGATTCAAAGGAAAACAGCCCACGCTCAGGCAGAATTAATTCCAATCGCCAAGTGCAGACTAAGCTGCAATATATATCATCAAACAATTTGCAGAGCAAATCTCCAAAGCCAAACAAAACATCTGATGGTGCTAAAACCATTGAGATAACAAAGCCAGAAACAGTGACAGTTCCTTCTTGTCCTTCATCTGAGGTGTCTGAGGAGATGGATGATAAACCCATTGAGAATATAGTGACGGATGATAAATCCATTGAGGATGTAGCTGATGATAAGGCCACTGAGGGCACGGCCTCTTATGATAAGGCCACTGAAGGAAAAGCTGCTGATGATACGACCGTTGAGGACAACACCACTGATGAAAGGAGCATTGAGAGTGGCACTGACGATAGGACCATTGCAGGTATAGCAGCTGATGTTAAATCTAGTGAAGAGGCAAAGGAGATTGATATATTGGATGAAGCCCCAAATTGTGATCAGAGTACTGCTACTGACGAGGAAATAGCTGATACTGAAGAAAGCATAGCTTATGATGGTAAATCAGCTGCATATGAAAAGAGTGAGGAATTAGAATCTAAATGTGAAAGGTTGGAGCAGGAACTTCGAGAAGTTGCTGCCCTTGAGATTTCTCTTTATTCAGTAGTGCCAGAGCACGGTTGTTCATCGCATAAATTGCACACACCAGCTCGGCGTCTGTCCAGGCTATATGTTCATGCATCAAAGTTTTGGTCCTCTGATAAGAAAGCTTCTGTCACAAAGAACTTCGTTTCTGGGCTTGTCCTTGTTGCAAAGTCTTGTGGAAATGATGTTTCAAGGTAAAGTATCTGTAATTGGATATAGTATGTAACTCTGTGTAGCTTATATTTCCGCATACCATCATTTTTAAAATAAATCTTTATGTAGGTTGACATTCTGGCTATCAAACACCGTTGTCCTAAGAGAGATCATTGCACAAACATTTGGCATTTCACGCCAACCAAGTCTTGCTATGAAGGCTTTCAGCACAAATGTTAATGCAAAGATGCTCGGTAAGAACTCTTCACCAACGCGGCGGAAAAACAACTACAGTGGCAAGCATGCTAGACCTGCTATCTGGCCATTACCTGATGATTGGCGGGAAACTGGTACACTCGTGGCTGCACTGGAGAAGATTGAATCATGGATCTTTTCTCGGATTGTTGAGTCAGTGTGGTGGCAGGTAAAACCTTTCTTATGCTTTCTCGGCACTTTTTAGGAAATTGAGTACATTTTATTCTCCGTAAAACTAGGATAGCAGACAGCTTTTTCGATTCATTTTGTTGTCAATTTTCTGAAGGATGTTTCCTTTTCAGGCATTGACACCCCACATGCAAACACTGGTGAAAGATATATCAAGTCCAAAGGCTGGGAGTTTGTTGGGACCTGCTTTGGGTGATCAGCAACAAGGGAACTTCTCCATTCATCTTTGGAAAACTGCTTTCCAAGATGCCTTCAGCAGAATATGTCCTCTTCGTGCTGGTGGACATGAGTGTGGATGCTTACCAGTGTTGGCAAAACTGGTATGTTTAATCATTGATATTTAATTTGAGAAGAATAATCATTTTTGTGAAGTTTATGCATGAGTTGTTTTATTATTGTCAGGTGATGGAGCACTGTGTAGCTCGTTTAGACGTTGCTATGTTTAATGCAGTCCTGCGTGAATCTGCAAATGAAGTACCATCTGATCCTATATCTGACCCAATTGTCGACTCAAGAGTTCTACCGATTCCAGCTGGTGACTTCAGCTTTGGATCAGGTGCACAGCTGAAGAACTCGGTATGTGCCCAAATTGCAAAACAACTACGTTCTTAGTTTAAAACCACTTACGTTGGAATGTTTCCTGTAACTGCATGAAGAACAAACCAGAACATGTGTTTTAAATCATCTCTTCCTTGCAAACAAAACCAAATGTTAATGGACCAAATGCTTCTTCAGATCGGAAATTGGTCCCGATGGTTGCAAGATAAGTTTGGCATGGTTGCTGCTGCCCCTGAGAAGCATGGTCAAGCAGGAGATGAGAGTGATGACAGAAGTGGTGCTGCTGATTTTTATTCTTTCAAGCTGCTCAACGAATTAAGTGATCTTCTGATGCTCCCAAAGGACATGCTTCTTGAAAAGTCCATCAGGAAGGAGGTCAGTATTCATGCTTAGTCACTCCAACTCTTAAGTTGGAACATATATTCAGGTTCAGTGCTGCAGTTAAAATTTTGTCATTCTGTTTAGGTCTGCCCTTCTATTGGCATTCCACTGGTAACAAGGATACTCTGCAACTTCACTCCTGACGAGTTCTGTCCTGAACCTGTTCCTGGAATGGTTTTAGAGGAGCTGAATGCCGAGGTACGACGTCTATTTGCTAAATGATATTATTGCATTGTAGCATTACAAAGTCCAAATACAATCTTGCTCACCATATGTAATGACTAACCAAGATACTTCTATAGTTTCACTCTACACCTGCTCAATCAGTGTTGGTTGCTAAATTTTCACACAGAGCTTGCTGGAGCGCTTCACGGAGAAAGATGTGATCACCACATTCCCCTGCGTCGCGGCTCCTGTTGTCTACTGCCCCCCTTCACCGGAGGATGTCGCGGAGAAAGTAGCAGACGCAGGCGGGAACGCGGAGCCGGACCTGAGGGCCTCCATGGTGCAGAGGAGAGGGTACACCAGCGACGACGACCTGGACGACCTGGGCAACCCCCTGGCGTCCCTGTACGACAGGAGCTCTCCACCCTCACCCTGCAACGGGGCCTCTCGTTCGACTACACGGCAAGGAGGCTCTATGTCGAACGCGAGATACGAGCTCCTGAGAGAAGTATATGGTCGGAGAGGCCTGGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029552

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA029552&oldid=28756"