BGIOSGA029566

From RiceWiki
Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029566| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029566, complete gene.| tag = OS09G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029566

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029566, complete gene.

LocusTag

OS09G0482660

Ensembl Transcript ID

BGIOSGA029566-TA

Ensembl Protein ID

BGIOSGA029566-PA

Length

5218

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17209118..17214335

Sequence Coding Region

17214124..17214335,17212392..17212823,17211331..17211865,17210989..17211092,17210622..17210867
,17209118..17210021

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17209118..17214335 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17209118..17214335 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGTTGCTGCCGCTGATCTGCTTCGTCTTGGCCTTGCTGCTCGCCGCCGGCGCCATCGGTGGTGGTGGTGGCGCGGCTGGAGGAGGAAATGGCGGCGGCGGCGAGCGGCGTGGGGTATACGTGGTGTACTTGGGCGCCGTGCCACCGCGGACCTCGCCCAACATCCTCCAGCAGACCCATCTCCGCCTCATTGGCGCCGTGCTCAAAAGGGGGCAGCCAGTGGAGAGCGTGGTGGTGCAGCAGTACAAGCACGCCTTCTCCGGCTTCGCCGCGCGGCTGTCAGCGGCGGAGGCCGCCGCGCTCCGCCGGAAGCCCGGCGTCATCTCCGTCTTCGCCGACCCTGTCTACCACCTCCACACCACCAGGTCATGGGACTTCCTCCAGCAGCAGACGACGGCCGCCGTCGACGTCAAGACCGGCGGCTCCGCCCGCCGCCGCCGCCGCTCGCCCCGCGCCCGCGCCGCCGCAGCATCAGCGTCGACGTCGTCGTCCCCGACGGCCGACACCATCATCGGCCTCCTCGACTCCGGCGTCTGGCCCGAGTCCCCGAGCTTCGACGACGCCGGCTTTGGCCCTGTCCCCGCCAGGTGGAAGGGCGTCTGCATGGCCGGCGATGACTTCAACTCCTCCAGCTGCAACCGGAAGCTGATAGGAGCAAGGTACTACGATGTCGGCGGCGAGGCGAAGCGGCAGTCAGCACGGAGCAGCGGGAGCTCGCCGCGGGACGAGGCCGGGCACGGGACGCACACCTCGTCGACGGCGGCCGGGAACGCGGTCAACGGTGCGTCGTACTACGGCCTCGCGGCGGGGACGGCCAAGGGCGGGTCGGCGTCGTCGAGGGTGGCCATGTACCGCGTCTGCTCCGGGGAGGGGTGCGCCGGGTCGGCCATCCTCGCCGGGTTCGACGACGCCGTCGCCGACGGCGTCGACGTCATCTCCGTCTCCCTCGGCGCGTCGCCCTACTTCCGCCCGGACTTCTCCGACGACCCCATCGCCATCGGCTCGTTCCACGCCGTGGCCAAGGGCATCATGGTCGTCTGCTCCGCCGGCAACGCAGGGCCGGACGCCGCCACCGTCGTGAACGCGGCGCCGTGGATCCTTACCGTCGCGGCGAGCACGATCGACCGCTACTTCCAATCGGACGTCGTGCTCGGCGGCAACAACACCGCTGTCAAGGGTGGAGCTATAAACTTCTCCAACTTGAACAAATCACCAAAATATCCATTGATCACCGGTGAATCAGCCAAGTCCAGCTCAGTTTCTGATACCGAGTCAGCAAGTCACTGTGAGCCGGGGACGCTGGATGCGAGCAAGATAAAAGGGAAGATCGTGCTGTGTCACCACTCGCGGAACAGCGACACGCCCAAGACGGAGAAGGTCGGGGAGCTCAAGAGCGCCGGCGCGGTTGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGTGAGCCTGTCGCGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCACGTGGCCGGGGCGGCGGCCGCCGTCAGGGCGTGGAACCCGGCGTGGAGCCCTGCGGCGATCCGGTCGGCGATCATGACGACGGCGGCCCAGCTGAACAACGACGGGGCGGCCGTGACGACCGACTCGGGGTCGCCGGCGACGCCGTACGACCACGGCGCGGGCCAGGTGAACCCGGCCGCCGCGCTGGACGCCGGGCTGGTGTACGAGCTCGGCGAGGAGGACTACCTCCAGTTCCTCTGCGACTACGGCTACGACGCGTCCCAGATCAAGCTGGTCGCCGCCTCCCTCCCCGGCGGCTTCAGCTGCGGCGCCGGCGGCAACGCCAGCGACAGCAAGGACCTCATCTCCGGCCTCAACTACCCGTCGATCGCCGTCACGGGGCTCGGCAAGGCCGGCGGCACCAGGACGGTGAGCCGCGTCGTCACCAACGTCGGCGCGCAGCAGGAGGCGACCTACACCGTCGCCGTCGCGGCGCCGGCCGGCCTGGACGTGAAGGTGGTGCCCGGCAAGCTGGAGTTCACTAAGAGCGTGAAGAAGCTGGGTTTCCAGGTGTCCTTCTCCGGCAAGAACGCCGCGGCGGCGGCCAAAGGGGACCTGTTTGGGTCAATAACGTGGTCGGATGGAAAGCATACAGTTCGTAGCCCATTCGTTGTCACCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MWLLPLICFVLALLLAAGAIGGGGGAAGGGNGGGGERRGVYVVYLGAVPPRTSPNILQQTHLRLIGAVLKRGQPVESVVVQQYKHAFSGFAARLSAAEAAALRRKPGVISVFADPVYHLHTTRSWDFLQQQTTAAVDVKTGGSARRRRRSPRARAAAASASTSSSPTADTIIGLLDSGVWPESPSFDDAGFGPVPARWKGVCMAGDDFNSSSCNRKLIGARYYDVGGEAKRQSARSSGSSPRDEAGHGTHTSSTAAGNAVNGASYYGLAAGTAKGGSASSRVAMYRVCSGEGCAGSAILAGFDDAVADGVDVISVSLGASPYFRPDFSDDPIAIGSFHAVAKGIMVVCSAGNAGPDAATVVNAAPWILTVAASTIDRYFQSDVVLGGNNTAVKGGAINFSNLNKSPKYPLITGESAKSSSVSDTESASHCEPGTLDASKIKGKIVLCHHSRNSDTPKTEKVGELKSAGAVGAVLVDDLEKAVATAYIDFPVTEITSNAAADIHKYISSTSEPVATITPTITVTEYKPAPVVAYFSSRGPSPQTPNILKPDVAAPGVNILASWIPTSTLPAGEEKPSQFNLVSGTSMACPHVAGAAAAVRAWNPAWSPAAIRSAIMTTAAQLNNDGAAVTTDSGSPATPYDHGAGQVNPAAALDAGLVYELGEEDYLQFLCDYGYDASQIKLVAASLPGGFSCGAGGNASDSKDLISGLNYPSIAVTGLGKAGGTRTVSRVVTNVGAQQEATYTVAVAAPAGLDVKVVPGKLEFTKSVKKLGFQVSFSGKNAAAAAKGDLFGSITWSDGKHTVRSPFVVTI</aaseq>

Gene Sequence

<dnaseqindica>1..212#1513..1944#2471..3005#3244..3347#3469..3714#4315..5218#ATGTGGTTGCTGCCGCTGATCTGCTTCGTCTTGGCCTTGCTGCTCGCCGCCGGCGCCATCGGTGGTGGTGGTGGCGCGGCTGGAGGAGGAAATGGCGGCGGCGGCGAGCGGCGTGGGGTATACGTGGTGTACTTGGGCGCCGTGCCACCGCGGACCTCGCCCAACATCCTCCAGCAGACCCATCTCCGCCTCATTGGCGCCGTGCTCAAAAGGTCCATCGTAAAATAAACTAATTTTTAACTCTCTTCCTGTTGGTGCTAATGTCTCTCAAGTTGCACTAGCTAGTAGTAGCATGCATGTCAGTCAATAAGAAGGTACTCGCTCAGTTTGCCGATTTGTAGCATGGCATTAAATATATTCTCTCCGTTTTATATTAGAAGATGTTTTAATTTTTCAAAGTTAAATTTCTTTATATATTAGAAGATGTTTTATTTTTTAAAGTTAAATTTCTTTATGTTTGGTCAAGTTTACGGAAAAATGTAACAAGTTATACGATACTGTGTTAGTTCCATTCAATCTAAATACTGATTTTTTTAAAAAAAATCACGATAGACATACACACGCCACTACATACGCAGCACCGCACTCACACCCTCACAAATGGACCCCCCTAGCATATGCTCTAAGAGATGGAAACCAACGGCACATCCTTGATCTAACAAAAATCCTGTTAAAAAGCACATGCAGACCATCGACATATCCCTGATCTCACTAAAATTCTATTAAAAGTCTACATGCATGTGCATAATATTCGTGGGCACCAGAATTTGAACCCTGGTTAGTAGAATCATACACTCACGACTCCGCTACCACACCACTAGTGTTTTTCCAAATATTGAATATAGTATGATTGTATAGTATAAAAACTATTTATATGTTTTTCTTGATCAAACATATATGATTTGACTTAAAAAAACAAAGCATCTTATAATGTGAAATAGAGGTAGCAGTTTTCTAAAAAAAAAACTCCATATAAATTAAAATAAGCAGACATTGTTACGTTAATTTAAAAACCCTAGTGTACACTTCTCTCACTTTGCTACAGTGTTGCACTTCTTGTTAATTTAACATTGTCTTTCTCTTTAACTATTTTCAATGGTTGAAGATTATTTTAATCTTACTATCGTTATACGGCTTAGTTATGGTGAAATACAATGTGAGAATTTACTTGGATATTTTTTATATGACTTCTTCTATATTTTCAAAAGCAAATAAATTTAAAAACCGACTAAAACACAGATAACGTATCAAAGTACCGATAAATTTATTTTCAATTTTGATAATAGGAAAAATAAAGATAAAGATAAAGAAGTAGATATGGAGATAGAGAATTTTCGTCAAACGGTTCTGAATTTTATGCCCAAAGATATTGGGATGCATATTATTGGTAAAAGGAAACCTCAGTAGCACAAAGTGATCACCAACGCAACACGTGTGTTGCGTGTGTCACGTCACGTCGACGTCATTGTGCCACACGTTAGTAACCGTGTCATGTGTGCACTACGCGAACAGGGGGCAGCCAGTGGAGAGCGTGGTGGTGCAGCAGTACAAGCACGCCTTCTCCGGCTTCGCCGCGCGGCTGTCAGCGGCGGAGGCCGCCGCGCTCCGCCGGAAGCCCGGCGTCATCTCCGTCTTCGCCGACCCTGTCTACCACCTCCACACCACCAGGTCATGGGACTTCCTCCAGCAGCAGACGACGGCCGCCGTCGACGTCAAGACCGGCGGCTCCGCCCGCCGCCGCCGCCGCTCGCCCCGCGCCCGCGCCGCCGCAGCATCAGCGTCGACGTCGTCGTCCCCGACGGCCGACACCATCATCGGCCTCCTCGACTCCGGCGTCTGGCCCGAGTCCCCGAGCTTCGACGACGCCGGCTTTGGCCCTGTCCCCGCCAGGTGGAAGGGCGTCTGCATGGCCGGCGATGACTTCAACTCCTCCAGCTGCAACCGGTGAGTCGCCGACGCCTATGCCAGAGAAATTTGATTTTCTTATTCTTAGTTAAAACTTTTGTGTTTAATTAAGTTTATAAAAAAATTAGCAACATTTATGATACAAAATTAGTTTCATAATTTGACGTATATTTTGATACAATGGTTTTACATTGAAAATTTACTACTTCAACTCCCTCCGTTGTAGGTTATGAATTTGGTCAAAATTAAACTACTCTAATTTTAACTAATTTTATAGAAAAAATAGTAATATTTTTAACCCAAGACAGATATATTATGTAAATTTATTCAATTATAGATTTAACGAAATTATACTGGTATTGTAAATATTATACTTTTTTCCTATAAAGATAGTCAAATTTAGAGTAGTTTGATTTTGACCAAAGTCAAAATATTTTTTAATCTGAAACGGAGATAGTATAATTTGGTCACTTAAAAAAATTAACTAAGAAAAAAGTCATTACAAATTACTTGTAATATGAAACGGAGAGTATATATCCTGATGTTTCCCGGGCGGCGCATGCAGGAAGCTGATAGGAGCAAGGTACTACGATGTCGGCGGCGAGGCGAAGCGGCAGTCAGCACGGAGCAGCGGGAGCTCGCCGCGGGACGAGGCCGGGCACGGGACGCACACCTCGTCGACGGCGGCCGGGAACGCGGTCAACGGTGCGTCGTACTACGGCCTCGCGGCGGGGACGGCCAAGGGCGGGTCGGCGTCGTCGAGGGTGGCCATGTACCGCGTCTGCTCCGGGGAGGGGTGCGCCGGGTCGGCCATCCTCGCCGGGTTCGACGACGCCGTCGCCGACGGCGTCGACGTCATCTCCGTCTCCCTCGGCGCGTCGCCCTACTTCCGCCCGGACTTCTCCGACGACCCCATCGCCATCGGCTCGTTCCACGCCGTGGCCAAGGGCATCATGGTCGTCTGCTCCGCCGGCAACGCAGGGCCGGACGCCGCCACCGTCGTGAACGCGGCGCCGTGGATCCTTACCGTCGCGGCGAGCACGATCGACCGCTACTTCCAATCGGACGTCGTGCTCGGCGGCAACAACACCGCTGTCAAGGTATATATCACAAAATTAAATATCCATATTGCATAATTACTACTCCCTTATCCTAAAATATATGGGATTAATTTGGACAGATGAGATATTTTCTAGTACTATATATCTGAACATGTTCTTTTTCCAGATTCGTTGTATTAGAAAAAATCTCATCTATTTCTAATATCTCATCCGTCTAAAATCCTTGTGGGAGCACTCTCTTGTGATCTTAACTACCCCATTTTTATGGAATCTGTAGGGTGGAGCTATAAACTTCTCCAACTTGAACAAATCACCAAAATATCCATTGATCACCGGTGAATCAGCCAAGTCCAGCTCAGTTTCTGATACCGAGTCAGCAAGGTACGTACTACAAGGCAAGCTTAGTAACGAAACAAAATTAAATTAACAGAAAGTTTCAGCAGAATCTGAGTAAGTAGTTTCATGCCCAAAAATCAAATCATAACCACAAAATAATTTGTAGTCACTGTGAGCCGGGGACGCTGGATGCGAGCAAGATAAAAGGGAAGATCGTGCTGTGTCACCACTCGCGGAACAGCGACACGCCCAAGACGGAGAAGGTCGGGGAGCTCAAGAGCGCCGGCGCGGTTGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGGTACTATACGTAGTCCTTCACACTATAGCGATTATATACTACCTCCGTTTTTTAATATATGACATCGTTAACTTTTTAACAATCATTTAATCATTCACCTTATTTATTTGTTTTTTTTCAAATAGAAAAATATTTAAGTTATATTTATAAAACATTTGGTAATAAATCAAGTTACATTACAGTATTCTCTCTCTCCTATAATATAAGCATATATTCTTAGAGTTGAACACAACTATTAAGAAAATAGATATAACTAAATAGGATTAGGCTACGATTAGATGAGAAGTGAAGGTATGTGAGAAAATTAAATGGTAGAGGATTGTAATTGGTTGAGAAGAAAATGCTGGTATATAAGTTATTATATTTTGAGACAAATTTTAAATGTTAAAAGTTGTTATATTTTTAGGACAGAGGGAGTAAATGATAATTACATCATTTTTTAATAAAACGAATGGTTAAATATATCTTAAAATATCAATGGTGTTATATATTAAAAAAATGGATGAAGTATACCCTAATTAGTGGCAGAATTAATTAAGCTCGATCGATCTCATCACATCACTCTCTCTTCCGTGCATGGTGATCAATTAAACTGCAAAGTGAGCCTGTCGCGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCACGTGGCCGGGGCGGCGGCCGCCGTCAGGGCGTGGAACCCGGCGTGGAGCCCTGCGGCGATCCGGTCGGCGATCATGACGACGGCGGCCCAGCTGAACAACGACGGGGCGGCCGTGACGACCGACTCGGGGTCGCCGGCGACGCCGTACGACCACGGCGCGGGCCAGGTGAACCCGGCCGCCGCGCTGGACGCCGGGCTGGTGTACGAGCTCGGCGAGGAGGACTACCTCCAGTTCCTCTGCGACTACGGCTACGACGCGTCCCAGATCAAGCTGGTCGCCGCCTCCCTCCCCGGCGGCTTCAGCTGCGGCGCCGGCGGCAACGCCAGCGACAGCAAGGACCTCATCTCCGGCCTCAACTACCCGTCGATCGCCGTCACGGGGCTCGGCAAGGCCGGCGGCACCAGGACGGTGAGCCGCGTCGTCACCAACGTCGGCGCGCAGCAGGAGGCGACCTACACCGTCGCCGTCGCGGCGCCGGCCGGCCTGGACGTGAAGGTGGTGCCCGGCAAGCTGGAGTTCACTAAGAGCGTGAAGAAGCTGGGTTTCCAGGTGTCCTTCTCCGGCAAGAACGCCGCGGCGGCGGCCAAAGGGGACCTGTTTGGGTCAATAACGTGGTCGGATGGAAAGCATACAGTTCGTAGCCCATTCGTTGTCACCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029566