BGIOSGA029574

From RiceWiki
Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029574| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029574, complete gene.| tag = P0463D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029574

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029574, complete gene.

LocusTag

P0463D04.29

Ensembl Transcript ID

BGIOSGA029574-TA

Ensembl Protein ID

BGIOSGA029574-PA

Length

2679

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17160243..17162921

Sequence Coding Region

17162466..17162921,17161877..17162047,17161179..17161717,17160904..17161098,17160243..17160783

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17160243..17162921 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17160243..17162921 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGCAGTAGCGACCATGGATCCCTCATGGAGGACTGGATGCCACCACCCACACCCAGCCCGAGAACACTCATGTCAAGCTTCTTGAATGAAGATTTTGTCTCTGGTTCATTTTCCAATATTTTCAGTGATCATGAGAGCAACAAACCCCAGGATCAGTTTGAGAGAAGCAGAGAGCTTGTGGATTTGAGTAAGGAAGTGCCTTCCCAATCCGCAAGACCCGCATTCCAGAGGGATGCTTCCCTGGATCATAGCTTGGTCAGTCCTACACAGAGATCAAACTCGCATGGTGGTTTGGCAGAGCGCAGGGCTGCGAGGGCTGGTTTCAGTGTCCCGAAAATCGATACATCCCGTGGTGGTTCGTCCACAGTAATTCGATCGCCCGTGGCAATTCCACCAGGTCTTAGTCCAACAACACTTCTCGAGTCACCGGTTTTCCTTTACAACGCAATGGCACAGCCTTCTCCAACCACTGGCACACTGCCATTTTTGATGGCTTCAAATGCTAAGTCAACAATACCGTCAGCTACCAAGATGGACGAAGATTGCACATTTGGCAATGACACTTTCTCCTTCCAACCGCATGTAGGGTCGAGACGGCCAAATTTCTCCGCTTCAGAAAAGGGTCCCAATGCTTGTCACCAAAACCAATCGCTGTCGAATATCCATCAGCGGGAATCCAGTCTTCAGTCAAGCTTTACTGCAGTCAAAGATATCACTGATGAAAAAAACATTAAAACAAAGACATCTGACTCCATGTTTGGTGATAACCACTCTTCTGATGAACAAGATGATGAGACTAACCAAAATGGAGAAAACTCTATGCCACCTCTGAACCACCGTTCAGGTGTCCCTCTGTCACATACCAATGATCCAGAAGTGAATGTCCTAGAGAACCGCGGTTCACAGACATGCCATAACTCTGCATCCTTGTGGGACAATGCCAAAAATGATTGCCTTCAAGATGTTCAAAGTGAAGTTATTGAAACAAGAACAGCTGCTTGTCTTCCAGTATCAACCAATTGTGATACATCTATCATGGAGTCCCAAGATGCAGTTGATGTGTCGTCAACACTATCTAATGAGGAGGATGATAGGGCAACGCATGGCACGGCTTCTATAGAGTGCAACGGGGATGGAGATGAGACTGATTCCAAGAGAAGGAAGCTGGATGCTTTGACAGCTGCAACTGCTGCTATTACCACCACCAGTAACATTGACATGGGAGCTGCGGCATCGAGAGGTGTCCGGGAGCCTCGTGTTGTTGTTCAGACAACAAGTGAGGTTGACATCCTTGATGACGGTTACCGCTGGCGCAAGTATGGACAGAAGGTTGTTAAAGGAAATCCAAACCCAAGGAGCTATTACAAATGTACGCACCAAGGGTGTTCGGTGCGCAAGCACGTGGAGAGAGCATCGCATGATCTAAAATCCGTCATCACGACGTACGAGGGGAAGCACAACCATGAAGTTCCAGCTGCCAGAAATAGTGGACATGGGAGCTCTGGATCTGGAAACGCTCCATCTGCACCGCAATCTAACGGCTCTCAGCGCAGGCAAGAACAAGGGCAAGCCAGCTTCAGCCAGTTTGGTGGCGCGGCTCCCTTCAGCTCCTTCGTTCTCCCACCAAGAAACCAATTTGGACCATCGGCGAGCAATTTCCCCTTTGGGATGGTCCCGCCAGGCATGGCGATTCCCATGCCATCTCTAGGGTCTCTTGCTCCAGCAAAGATGGCTGGTCATCCATCCACCATGCAGGGCTACCAGGGGCTCATGATTCCGGAAGGAGAGATGAAGACAGAGCCCATGTCGCAGCTCGGCTTCCCCGCGGTAAACCAATCTTCATCATCCTTCCAACAGATGATGAACAGGCCTCCATCATTTGGACCTCAGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MASSSDHGSLMEDWMPPPTPSPRTLMSSFLNEDFVSGSFSNIFSDHESNKPQDQFERSRELVDLSKEVPSQSARPAFQRDASLDHSLVSPTQRSNSHGGLAERRAARAGFSVPKIDTSRGGSSTVIRSPVAIPPGLSPTTLLESPVFLYNAMAQPSPTTGTLPFLMASNAKSTIPSATKMDEDCTFGNDTFSFQPHVGSRRPNFSASEKGPNACHQNQSLSNIHQRESSLQSSFTAVKDITDEKNIKTKTSDSMFGDNHSSDEQDDETNQNGENSMPPLNHRSGVPLSHTNDPEVNVLENRGSQTCHNSASLWDNAKNDCLQDVQSEVIETRTAACLPVSTNCDTSIMESQDAVDVSSTLSNEEDDRATHGTASIECNGDGDETDSKRRKLDALTAATAAITTTSNIDMGAAASRGVREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHEVPAARNSGHGSSGSGNAPSAPQSNGSQRRQEQGQASFSQFGGAAPFSSFVLPPRNQFGPSASNFPFGMVPPGMAIPMPSLGSLAPAKMAGHPSTMQGYQGLMIPEGEMKTEPMSQLGFPAVNQSSSSFQQMMNRPPSFGPQM</aaseq>

Gene Sequence

<dnaseqindica>1..456#875..1045#1205..1743#1824..2018#2139..2679#ATGGCCAGCAGTAGCGACCATGGATCCCTCATGGAGGACTGGATGCCACCACCCACACCCAGCCCGAGAACACTCATGTCAAGCTTCTTGAATGAAGATTTTGTCTCTGGTTCATTTTCCAATATTTTCAGTGATCATGAGAGCAACAAACCCCAGGATCAGTTTGAGAGAAGCAGAGAGCTTGTGGATTTGAGTAAGGAAGTGCCTTCCCAATCCGCAAGACCCGCATTCCAGAGGGATGCTTCCCTGGATCATAGCTTGGTCAGTCCTACACAGAGATCAAACTCGCATGGTGGTTTGGCAGAGCGCAGGGCTGCGAGGGCTGGTTTCAGTGTCCCGAAAATCGATACATCCCGTGGTGGTTCGTCCACAGTAATTCGATCGCCCGTGGCAATTCCACCAGGTCTTAGTCCAACAACACTTCTCGAGTCACCGGTTTTCCTTTACAACGCAATGGTATGTCATGTTTCCACAATTTGTTTGTTTATGCATTATGCCCCGATAGGATGTCTCTAGCAAGGTTGTGATAAGCCATAGTTAGAGTTACTGAGTTAGTATCAAAGACTTGCAGGTTGCAATTACCAGGCATATGAGTTTTTCTTATTTATTTATTAACGAACAGACCATGGGGTTTGGCAGTAAAGAGGACATTGATTGATGTATATTATGTAGAACATGATTGTGGGCAGTATCAAAGCTTGTAAATACAGTAAGTACTGAATGATGCTTACTGTTAGGAACACTACTAGAAATGATTTTATGACATCTTACAATTTTAGACATTTGTCTCGTGATTTATTATGCATAAGTTATTTTTTAATTCATAACTTAACAAATATGTTTGTGCACTTCTGTTGCGATATTTGCTATACAGGCACAGCCTTCTCCAACCACTGGCACACTGCCATTTTTGATGGCTTCAAATGCTAAGTCAACAATACCGTCAGCTACCAAGATGGACGAAGATTGCACATTTGGCAATGACACTTTCTCCTTCCAACCGCATGTAGGGTCGAGACGGCCAAATTTCTCCGCTTCAGAAAAGGTGATTCTTTGACTGTCGGTCTCCATTTCAGTTTTCCTTCCAGTATTATGTAATATTCCTTCCAGTATTATGTAATACTGTCTCTGTTCTTTTATTGCAAACTTCACCGCCCAAATGACCCACCTCATTCCTTTTAATCCTTTTGTGTTTATTGTACAGGGTCCCAATGCTTGTCACCAAAACCAATCGCTGTCGAATATCCATCAGCGGGAATCCAGTCTTCAGTCAAGCTTTACTGCAGTCAAAGATATCACTGATGAAAAAAACATTAAAACAAAGACATCTGACTCCATGTTTGGTGATAACCACTCTTCTGATGAACAAGATGATGAGACTAACCAAAATGGAGAAAACTCTATGCCACCTCTGAACCACCGTTCAGGTGTCCCTCTGTCACATACCAATGATCCAGAAGTGAATGTCCTAGAGAACCGCGGTTCACAGACATGCCATAACTCTGCATCCTTGTGGGACAATGCCAAAAATGATTGCCTTCAAGATGTTCAAAGTGAAGTTATTGAAACAAGAACAGCTGCTTGTCTTCCAGTATCAACCAATTGTGATACATCTATCATGGAGTCCCAAGATGCAGTTGATGTGTCGTCAACACTATCTAATGAGGAGGATGATAGGGCAACGCATGGCACGGCTTCTATAGAGTGCAACGGGGATGGAGATGAGACTGATTCCAAGAGAAGGTTAATGCCATCTACCACTTAATTACTTAATGTAGGCATGAATGCATGATAATTCACTGATGGATCTGGTTCTTTTTCAGGAAGCTGGATGCTTTGACAGCTGCAACTGCTGCTATTACCACCACCAGTAACATTGACATGGGAGCTGCGGCATCGAGAGGTGTCCGGGAGCCTCGTGTTGTTGTTCAGACAACAAGTGAGGTTGACATCCTTGATGACGGTTACCGCTGGCGCAAGTATGGACAGAAGGTTGTTAAAGGAAATCCAAACCCAAGGTCAGTTTAGTGTCACTGCATTTCTTGCAGTAATTGATCATGCGGCATGCATCCTTTGATTAATGTTTGATATTCTTGGTACCATCCTGAGATGAGTAACATTATTTCATTTGTCTGCAGGAGCTATTACAAATGTACGCACCAAGGGTGTTCGGTGCGCAAGCACGTGGAGAGAGCATCGCATGATCTAAAATCCGTCATCACGACGTACGAGGGGAAGCACAACCATGAAGTTCCAGCTGCCAGAAATAGTGGACATGGGAGCTCTGGATCTGGAAACGCTCCATCTGCACCGCAATCTAACGGCTCTCAGCGCAGGCAAGAACAAGGGCAAGCCAGCTTCAGCCAGTTTGGTGGCGCGGCTCCCTTCAGCTCCTTCGTTCTCCCACCAAGAAACCAATTTGGACCATCGGCGAGCAATTTCCCCTTTGGGATGGTCCCGCCAGGCATGGCGATTCCCATGCCATCTCTAGGGTCTCTTGCTCCAGCAAAGATGGCTGGTCATCCATCCACCATGCAGGGCTACCAGGGGCTCATGATTCCGGAAGGAGAGATGAAGACAGAGCCCATGTCGCAGCTCGGCTTCCCCGCGGTAAACCAATCTTCATCATCCTTCCAACAGATGATGAACAGGCCTCCATCATTTGGACCTCAGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029574