BGIOSGA029588

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Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029588| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029588, complete gene.| tag = OsI_317...")
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Gene Name

BGIOSGA029588

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029588, complete gene.

LocusTag

OsI_31756

Ensembl Transcript ID

BGIOSGA029588-TA

Ensembl Protein ID

BGIOSGA029588-PA

Length

4903

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16926010..16930912

Sequence Coding Region

16930695..16930912,16930174..16930562,16929904..16930077,16929520..16929828,16928390..16929111
,16926010..16928250

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16926010..16930912 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16926010..16930912 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGGCGTTGGTACTTGCATCTCAGGAGGTTGGAGAAGGCAGTCGGGATAGGGATTCCCATGGTACCCTGGAGGGTGATGCTGAAGGTTTCTACACTGAAGGTCCAGGAACCTTCACGGAGGGAGAAGTCTATGAGGAAGAAGAAGATGTAATTGAGGTGAATCTTGAAGATGAAGAAGTCAAGCTTGCGGGTCAATGGACAATCCTATCAAGGGGGGACGCCTTATTGGTGGCCCAATTTGATGGGATTATAAGCCCGTCGCAGGTACCTCTTGAGGTGGTACCCATCTGGGTTAGAATCTATGATCTGCCCTTGGTGTTGATGACGAGGGAAAGAGGAAATCTCTATGGTAGTAAGCTTGGTCACGTTCGGGAGGTGGATGTGGAGAATGACGGCCGTAATAAACATGATTTTTTCCGCATCCGTGTGGATCTCCCTGTTAAGCGCCCCCTCCGGAAAAAGCTTGCCATTAAGATCAAGGAGCAAGGTAGTGAGGTTGTCAGACATTTTGACTTATGGTATGAGAGGGTGCCCCACTTCTGCTTCATCTGTGGGTTTATCGGTCACTCAGACAAGGACTGCGAAAAGAAACTACTGACAGGTGTGGCACACAAGCTGTCCTTCAGGAGTGCTGCAAGCTCTACATCGTCTAGACAGAAGAACGGTGAGCAATGGGATGAGGCGATCCCACCGAGGGTGGATGCACATGATGGATTTGAGTCCAAGGAGAAAGCAGGAGATGGGAAGATAGATCAACTGCTTGCAGAGAAGGCCCTTGTTGATCAGCTACCTACGGAGGAGATGATTCCAGCGATGAAGAACCTGCACCAGCAAGCTTCCTTTGGAGAGGGCTCAATGGATGAAACTAATAGTCAACACAAAAGAAGAACAACAGAGCAGAGAGATGGCAAGCATTCTGGCAGAGTCAAGCAAGCACTGTTGGAGTACGGCAAGGCAGCGGAGGAGAGTAAACAGCTTCAGCTAGCTCCTAGCAGCACTCCACGAGCGCTGAAGAGGTTTAAAAAGGAGAAAGGGGAGAGCATAAAGGTGGAAGACAGGGAAGCAACCAGCTCGGGGGCTGCTGATATAAGGCAATCCTCTAATCTTCCATGGTTGGTTATGGGAGATTTCAATGAGGTGCTGTGGCAATACGAGCATTTCTCCAAGAGACCTAGAAATGAGTCTCAGATGAGAGCTTTCCGAGATGCTTTACATAGCTGTGAATTGCATGACCTGGGTTTTAGAGGACTGCCTCATACTTATGATAACAAAAGAGAGGGGTGGAACAATGTCAAAGTTCGCCTTGATCGTGCTGTTGCTGACGGCAATTGGAGAGATGTGTTTAGTAATGCCCAACTATCTCACTTAGTGTCTCCTTGCTCTGATCATTGTCCAATTGTGTTGCAATTGTCGGGTGATTCTCGGACCCAAGGGAGGAAGAAGTGCTTGCAGTATGAGATCTTTTGGGAGAGGGAAGCAGCAATATCTGAAGTGATAGGTGAGGCCTGGAGTGAATATGGGACAAAGGAGGATCTGGGGGAGATTAACAAGGCTCTCGGTAAAGTAATGATAGCACTTCACTCCTGGAGTAGAACCAAATGCAAAAATGTTGGCCGTGAACTGGAGAGAGCGCGGAAGAGGTTGTCCAACCTCCTTGAGGCAAACGCTGATGGGGCAACAGTTCGACAAGTGACTGACAACATGAATGATTTGTTGTATAGGGAGGAGATGCTCTGGCTGCAGCGTTCACGAGTTAGCTGGCTGAAAGAAGGGGATCGCAACACCAAGTTCTTTCACTCCCGAGTATCCAAGATTACTAGGCTCTTCCAAACTAAGGTTTCAGCTAAGATGAATGACAAACTGTGCGAGGATTTTACAGAGGAGGAAGTCGCCATTGCTATGTTTCAGATTGGCCCAATTAAGGCGCCGGGCCCCGACGGCTTCCCGGCTCATTTCTATCAGAGAAACTGGGGTGGCTTGAAGAGTGACATTGTCAGGGCAGTGAAGGAATTTTTTAGGTCAGGAATTATGCCAGTGGGGGTTAATGACACTGCAATCGTGCTCATTCCAAAGATTGATCAACCCACTGAACTAAAAGACTTAAGACCGATCGGGCTATGCAATGTGATCTATAAAGTGGTTTCGAAGTGCCTAGTGAACAGATTGAAACCCCTCTTGGATGAATTAATATCTGTTAACCAAAGTGCATTTGTACCTGGTAGAATGATCACAGATAATGCTCTTCTAGCCTTTGAGTACTTCCACTATATCCAGAAGAACAAGAATCCAAACAAAGCAGCAAGTGCATACAAACTTGATCTATCGAAAGCGTATGACAGGGTGGATTGGGGCTTCTTGGAGCAGGCAATGTATAAGTTGGGTTTCGCTCACCGGTGGGTTAGATGGATTATGGAGTGTATAACCACGGTGAGATACTCGGTTAAATTCAATGGAACCCTTCTTGATTCATTTGCTCCATCTCGGGGACTTTGTCAAGGAGATCCCTTATCTCCCTTCCTATTCCTGTTCCTGGCCGACGGACTATCTTTGCTCTTAGATGAAAAGGTCCAGCAGGGGGTGCTTTCTCCTATTCACATATGCCATAGTGCTCCGGGTATCTCACACTTACTATTCGCAGATGATACTCTGTTATTTCTCAAGGCTGTACCAGAACAGGCAGAGGTGATCAGGGAGGTTCTTAATGACTATGCAACTGCTACAGGTCAGCAGATAAATCCCTCGAAATGCTCCATAATGTTTGGGGACTCTTCCTCAGAGTTAGTTCAGGAGGCTATCAGGGATACACTACAAATTGCTAATAATGTTTTTGAGGATAAGTACTTAGGCTTCCCAACCCCAGATGGAAGGCTAAAGAAAGGAAAATTTCAGAGCATCCAGGAAAGAATTTGGAAGAGGCTGATACAGTGGGGAGAAAATTATCTTTCAAGTGGAGGAAAGGAGATTCTGATCAAGGCATTAATCCAAGCTATTCCGGTGTACGTCATGGGAATTTTTAAACTCCCAGAATCTGTGTGTGATGAACTTACAAGAATCACAAGAGGTTTTTGGTGGGGTGGTGAAAAGGGGGCGCGGAAAACACACTGGAAGGCTTGGGATACGCTGACTAAACCCAAGAATTGTGGTGGCTTGGGTTTCAGGGATTTCAGATTGTTCAACCAAGCTCTGTTAGCCAGGCAGGCCTGGAGGCTAATTGATTCTCCTGACAGTCTTTGTGCAATGGTTCTGAAAGCGAAATATTTCCTAAATGGAAATCTCACTGACACAAGTTTTGGCGGGAATGCTTCGCCAGGCTGGAGAGCAATTGAGTTTGGTTTGGAATTGCTGAAGAAGGGGATAATATGGAGAATTGGGAATGGTCGCTCAGTCCGTATATGGCGTGATCCATGGATTCCGCGTGATCACTCAAGACGACCGATCACCAAGAAGAGTAACTACAAAACCAAATGGGTAACTGACCTCCTAACAGATGCAGGCGAATGGGATGTCAATCGGGTTCGACAGATATTCTGGCCCATTGATGCTGAAGTTATACTGAAAATTCGTGTTCCCTCTCAGGATGTAAGCGACTTTGTGGCTTGGCACCCAGACAGATTAGGGAGGTTTTCAGTCCGAAGTGCTTATAGCCTGGCAGTTTCGCTTGCTTCTGAGAATGCTTTTTCAGCCTCATCTGCAGTCGACCGTAGTAAAGCATGGAACATGCTTTGGAAATGTAATGTGCCTCAGAAGGTAAAAATTTTCGCTTGGAAGGTGGCATTAGATTGCCTTGCTACCATGGTGAACAAGAAGAGAAGGAAATTGGAGGCCACAGATGTTTGTGCAATTTGCGGTACTGAGGAAGAAGACTCTGCCCATGCATTGTGTCGATGTCCACATGCCAAGTCTCTTTGGATGGCCATGAAGGAGTCCCAGAATATATCCTGTATTATGGATGATGGCCCGTTTGGATCAGGTTGGATCTTTGATAGATTGGAGCATCTTCTCGAACCCGAGCGGGCTATGTTTCTCATGGTATTGTGGCGCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASALVLASQEVGEGSRDRDSHGTLEGDAEGFYTEGPGTFTEGEVYEEEEDVIEVNLEDEEVKLAGQWTILSRGDALLVAQFDGIISPSQVPLEVVPIWVRIYDLPLVLMTRERGNLYGSKLGHVREVDVENDGRNKHDFFRIRVDLPVKRPLRKKLAIKIKEQGSEVVRHFDLWYERVPHFCFICGFIGHSDKDCEKKLLTGVAHKLSFRSAASSTSSRQKNGEQWDEAIPPRVDAHDGFESKEKAGDGKIDQLLAEKALVDQLPTEEMIPAMKNLHQQASFGEGSMDETNSQHKRRTTEQRDGKHSGRVKQALLEYGKAAEESKQLQLAPSSTPRALKRFKKEKGESIKVEDREATSSGAADIRQSSNLPWLVMGDFNEVLWQYEHFSKRPRNESQMRAFRDALHSCELHDLGFRGLPHTYDNKREGWNNVKVRLDRAVADGNWRDVFSNAQLSHLVSPCSDHCPIVLQLSGDSRTQGRKKCLQYEIFWEREAAISEVIGEAWSEYGTKEDLGEINKALGKVMIALHSWSRTKCKNVGRELERARKRLSNLLEANADGATVRQVTDNMNDLLYREEMLWLQRSRVSWLKEGDRNTKFFHSRVSKITRLFQTKVSAKMNDKLCEDFTEEEVAIAMFQIGPIKAPGPDGFPAHFYQRNWGGLKSDIVRAVKEFFRSGIMPVGVNDTAIVLIPKIDQPTELKDLRPIGLCNVIYKVVSKCLVNRLKPLLDELISVNQSAFVPGRMITDNALLAFEYFHYIQKNKNPNKAASAYKLDLSKAYDRVDWGFLEQAMYKLGFAHRWVRWIMECITTVRYSVKFNGTLLDSFAPSRGLCQGDPLSPFLFLFLADGLSLLLDEKVQQGVLSPIHICHSAPGISHLLFADDTLLFLKAVPEQAEVIREVLNDYATATGQQINPSKCSIMFGDSSSELVQEAIRDTLQIANNVFEDKYLGFPTPDGRLKKGKFQSIQERIWKRLIQWGENYLSSGGKEILIKALIQAIPVYVMGIFKLPESVCDELTRITRGFWWGGEKGARKTHWKAWDTLTKPKNCGGLGFRDFRLFNQALLARQAWRLIDSPDSLCAMVLKAKYFLNGNLTDTSFGGNASPGWRAIEFGLELLKKGIIWRIGNGRSVRIWRDPWIPRDHSRRPITKKSNYKTKWVTDLLTDAGEWDVNRVRQIFWPIDAEVILKIRVPSQDVSDFVAWHPDRLGRFSVRSAYSLAVSLASENAFSASSAVDRSKAWNMLWKCNVPQKVKIFAWKVALDCLATMVNKKRRKLEATDVCAICGTEEEDSAHALCRCPHAKSLWMAMKESQNISCIMDDGPFGSGWIFDRLEHLLEPERAMFLMVLWRN</aaseq>

Gene Sequence

<dnaseqindica>1..218#351..739#836..1009#1085..1393#1802..2523#2663..4903#ATGGCCTCGGCGTTGGTACTTGCATCTCAGGAGGTTGGAGAAGGCAGTCGGGATAGGGATTCCCATGGTACCCTGGAGGGTGATGCTGAAGGTTTCTACACTGAAGGTCCAGGAACCTTCACGGAGGGAGAAGTCTATGAGGAAGAAGAAGATGTAATTGAGGTGAATCTTGAAGATGAAGAAGTCAAGCTTGCGGGTCAATGGACAATCCTATCAAGGTATTACTCAATGCGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGGCTGCACAGGGGGGACGCCTTATTGGTGGCCCAATTTGATGGGATTATAAGCCCGTCGCAGGTACCTCTTGAGGTGGTACCCATCTGGGTTAGAATCTATGATCTGCCCTTGGTGTTGATGACGAGGGAAAGAGGAAATCTCTATGGTAGTAAGCTTGGTCACGTTCGGGAGGTGGATGTGGAGAATGACGGCCGTAATAAACATGATTTTTTCCGCATCCGTGTGGATCTCCCTGTTAAGCGCCCCCTCCGGAAAAAGCTTGCCATTAAGATCAAGGAGCAAGGTAGTGAGGTTGTCAGACATTTTGACTTATGGTATGAGAGGGTGCCCCACTTCTGCTTCATCTGTGGGTTTATCGGTCACTCAGACAAGGACTGCGAAAAGAAACTACTGACAGGTGGACAACCCTTCCAATTCTCTGCAGACCTGCGTTGCTCCCCTTTGAAACCGTTTGAGAGGAAGATGAGTAAAATACAACCAGTGTAGTCTTCAGGTGTGGCACACAAGCTGTCCTTCAGGAGTGCTGCAAGCTCTACATCGTCTAGACAGAAGAACGGTGAGCAATGGGATGAGGCGATCCCACCGAGGGTGGATGCACATGATGGATTTGAGTCCAAGGAGAAAGCAGGAGATGGGAAGATAGATCAACTGCTTGCAGAGAAGGCCCGTAATTTGTAGGTTTCGGCACAGACAGGTCCGGAACAGTACGGTGAGTTGTCTCGGGAGGTTATCACTGATACAGTTGTTGATCAGCTACCTACGGAGGAGATGATTCCAGCGATGAAGAACCTGCACCAGCAAGCTTCCTTTGGAGAGGGCTCAATGGATGAAACTAATAGTCAACACAAAAGAAGAACAACAGAGCAGAGAGATGGCAAGCATTCTGGCAGAGTCAAGCAAGCACTGTTGGAGTACGGCAAGGCAGCGGAGGAGAGTAAACAGCTTCAGCTAGCTCCTAGCAGCACTCCACGAGCGCTGAAGAGGTTTAAAAAGGAGAAAGGGGAGAGCATAAAGGTGGAAGACAGGGAAGCAACCAGCTCGGGGGCTGCTGGTAAACTGACGGGATCTGTGATTGGATCCCGTCAGGAGAAATAGTTGCTTGTCATGGAACTGTCGGGGTATTGGGAACGCCACGACAGTTCGTGATCTTTGTACCTTGGTTAAGGAGGTTGGTTCCCATTTAGTGTTTTTATGTGAGACTAGACAAAAGGTGGAAAGAATTAGGCATTTGCGTAATAGATTGGGTTTGAAAGGTTTTGCTGGGGTCAGTAATGAAGGAATGTGCGGTGGTCTTGCTCTTTTCTGGCACGAGTCTGTTTATGTGGAAGTTTTAAATATGAATGAAAGACATATTGATGCGTATGTGAGAATGACTGTGGATGGTCCTTTGTGGCATGTTACTTTGTGTATGGGGAGCCTTGTGTTGAGAATAGACATCGTATGTGGTCCCTTTTGGAAGATATAAGGCAATCCTCTAATCTTCCATGGTTGGTTATGGGAGATTTCAATGAGGTGCTGTGGCAATACGAGCATTTCTCCAAGAGACCTAGAAATGAGTCTCAGATGAGAGCTTTCCGAGATGCTTTACATAGCTGTGAATTGCATGACCTGGGTTTTAGAGGACTGCCTCATACTTATGATAACAAAAGAGAGGGGTGGAACAATGTCAAAGTTCGCCTTGATCGTGCTGTTGCTGACGGCAATTGGAGAGATGTGTTTAGTAATGCCCAACTATCTCACTTAGTGTCTCCTTGCTCTGATCATTGTCCAATTGTGTTGCAATTGTCGGGTGATTCTCGGACCCAAGGGAGGAAGAAGTGCTTGCAGTATGAGATCTTTTGGGAGAGGGAAGCAGCAATATCTGAAGTGATAGGTGAGGCCTGGAGTGAATATGGGACAAAGGAGGATCTGGGGGAGATTAACAAGGCTCTCGGTAAAGTAATGATAGCACTTCACTCCTGGAGTAGAACCAAATGCAAAAATGTTGGCCGTGAACTGGAGAGAGCGCGGAAGAGGTTGTCCAACCTCCTTGAGGCAAACGCTGATGGGGCAACAGTTCGACAAGTGACTGACAACATGAATGATTTGTTGTATAGGGAGGAGATGCTCTGGCTGCAGCGTTCACGAGTTAGCTGGCTGAAAGAAGGGGATCGCAACACCAAGTTCTTTCACTCCCGAGTAGTGTGGAGAGCCGAAAAGAACAAAATTTTGAAGCTGCGGGACTCAGAGGGAACTATTCATAGTTCGACAACAGAAATGGAGAGAATGGCAACTGATTACTTTCAGAAGTTGTACACTGCTGACCCCAAGCTTGGACCAGTCCAAGATTACTAGGCTCTTCCAAACTAAGGTTTCAGCTAAGATGAATGACAAACTGTGCGAGGATTTTACAGAGGAGGAAGTCGCCATTGCTATGTTTCAGATTGGCCCAATTAAGGCGCCGGGCCCCGACGGCTTCCCGGCTCATTTCTATCAGAGAAACTGGGGTGGCTTGAAGAGTGACATTGTCAGGGCAGTGAAGGAATTTTTTAGGTCAGGAATTATGCCAGTGGGGGTTAATGACACTGCAATCGTGCTCATTCCAAAGATTGATCAACCCACTGAACTAAAAGACTTAAGACCGATCGGGCTATGCAATGTGATCTATAAAGTGGTTTCGAAGTGCCTAGTGAACAGATTGAAACCCCTCTTGGATGAATTAATATCTGTTAACCAAAGTGCATTTGTACCTGGTAGAATGATCACAGATAATGCTCTTCTAGCCTTTGAGTACTTCCACTATATCCAGAAGAACAAGAATCCAAACAAAGCAGCAAGTGCATACAAACTTGATCTATCGAAAGCGTATGACAGGGTGGATTGGGGCTTCTTGGAGCAGGCAATGTATAAGTTGGGTTTCGCTCACCGGTGGGTTAGATGGATTATGGAGTGTATAACCACGGTGAGATACTCGGTTAAATTCAATGGAACCCTTCTTGATTCATTTGCTCCATCTCGGGGACTTTGTCAAGGAGATCCCTTATCTCCCTTCCTATTCCTGTTCCTGGCCGACGGACTATCTTTGCTCTTAGATGAAAAGGTCCAGCAGGGGGTGCTTTCTCCTATTCACATATGCCATAGTGCTCCGGGTATCTCACACTTACTATTCGCAGATGATACTCTGTTATTTCTCAAGGCTGTACCAGAACAGGCAGAGGTGATCAGGGAGGTTCTTAATGACTATGCAACTGCTACAGGTCAGCAGATAAATCCCTCGAAATGCTCCATAATGTTTGGGGACTCTTCCTCAGAGTTAGTTCAGGAGGCTATCAGGGATACACTACAAATTGCTAATAATGTTTTTGAGGATAAGTACTTAGGCTTCCCAACCCCAGATGGAAGGCTAAAGAAAGGAAAATTTCAGAGCATCCAGGAAAGAATTTGGAAGAGGCTGATACAGTGGGGAGAAAATTATCTTTCAAGTGGAGGAAAGGAGATTCTGATCAAGGCATTAATCCAAGCTATTCCGGTGTACGTCATGGGAATTTTTAAACTCCCAGAATCTGTGTGTGATGAACTTACAAGAATCACAAGAGGTTTTTGGTGGGGTGGTGAAAAGGGGGCGCGGAAAACACACTGGAAGGCTTGGGATACGCTGACTAAACCCAAGAATTGTGGTGGCTTGGGTTTCAGGGATTTCAGATTGTTCAACCAAGCTCTGTTAGCCAGGCAGGCCTGGAGGCTAATTGATTCTCCTGACAGTCTTTGTGCAATGGTTCTGAAAGCGAAATATTTCCTAAATGGAAATCTCACTGACACAAGTTTTGGCGGGAATGCTTCGCCAGGCTGGAGAGCAATTGAGTTTGGTTTGGAATTGCTGAAGAAGGGGATAATATGGAGAATTGGGAATGGTCGCTCAGTCCGTATATGGCGTGATCCATGGATTCCGCGTGATCACTCAAGACGACCGATCACCAAGAAGAGTAACTACAAAACCAAATGGGTAACTGACCTCCTAACAGATGCAGGCGAATGGGATGTCAATCGGGTTCGACAGATATTCTGGCCCATTGATGCTGAAGTTATACTGAAAATTCGTGTTCCCTCTCAGGATGTAAGCGACTTTGTGGCTTGGCACCCAGACAGATTAGGGAGGTTTTCAGTCCGAAGTGCTTATAGCCTGGCAGTTTCGCTTGCTTCTGAGAATGCTTTTTCAGCCTCATCTGCAGTCGACCGTAGTAAAGCATGGAACATGCTTTGGAAATGTAATGTGCCTCAGAAGGTAAAAATTTTCGCTTGGAAGGTGGCATTAGATTGCCTTGCTACCATGGTGAACAAGAAGAGAAGGAAATTGGAGGCCACAGATGTTTGTGCAATTTGCGGTACTGAGGAAGAAGACTCTGCCCATGCATTGTGTCGATGTCCACATGCCAAGTCTCTTTGGATGGCCATGAAGGAGTCCCAGAATATATCCTGTATTATGGATGATGGCCCGTTTGGATCAGGTTGGATCTTTGATAGATTGGAGCATCTTCTCGAACCCGAGCGGGCTATGTTTCTCATGGTATTGTGGCGCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029588