BGIOSGA029590

From RiceWiki
Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029590| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029590, complete gene.| tag = P0556A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029590

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029590, complete gene.

LocusTag

P0556A05.6

Ensembl Transcript ID

BGIOSGA029590-TA

Ensembl Protein ID

BGIOSGA029590-PA

Length

5590

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16873856..16879445

Sequence Coding Region

16879078..16879445,16878007..16878164,16877645..16877867,16877410..16877551,16877099..16877302
,16876564..16876698,16876137..16876265,16875373..16875764,16874630..16874840
,16874240..16874433,16873856..16874069

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16873856..16879445 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16873856..16879445 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCCGCCGGCGCCACCACCTCCCCGCCGTCCTCCGCCTCCTCTCCACTTCCTGCCGCCGCGGCCACCCCACGCAGCCGCCGCAGCATCCGAGCCCCGCCCCGCTCCCGCTCCCGCCGCCGGTGGCGAAGAAGGTCCCCTTCACGGCGTCGGCGCACGGGAGGTCGTGGAGCGACCCCTACCACTGGATGCGCGACACCTCCGACCCCGACCTCGCGGCGCTCCTCGAGGCCGAGAACGCCTACGCCGACGCCTTCGTCGACTCCGCCGGCGAGGGCGGCGGCGGCCTCCGCGCGCGCCTCGCGGCCGAGATGCGCGCGCGGCTGCCCCCTTCCGCCGCCTCCCCGCCTCAGCCCTGGGGCCCCTGGTTATATTACCAGTATGTTCCAGAGGGTAAGGAATACCCAGTTTTATCCAGAAGATTGAGGTCTTCTGGTGGTCTAGCAAGAGCTGCCCTTGATTTCATTTCTGGTTCAAAAAAGGAGCAGGTGTTGCTTGACTGGAATGAGATTGCAGAAAAATTTGGTTATGTGCACATCGGGAGTTGTCGAATCTCTCCTGATCATAGGTTTCTCGCATATACTCTTGATATATCTGGGGATGAGTTCTTTTCCTTAGAAGTGAAAGATATTCAGTCGACAAACACCATTTTTAGTTCACCCCACAAGGGAATAGTTAGCTTAGCATGGTCTCGCAACAGCGACAACTTATTTTACACAGTCTGTGATGAGACTCTACGACCTAATCAGGTTCTCTGTAAAGATCTGCAATCAGATCAGGCAGGTTTTTTGGTTTTCATGGAGAAAGATATAAACTGTTGTGTGGATATCACAAGCACAAAAGATTTCAAGTATGTCACTATCAATTCAAACACTAGGACATCATCCGAGGTGCACGTGATGGAGTCTGGTCATGTAAGAGGTGGCTTATGGCCCGTACAGAAACGTTCTGACAAAGTGCAGTACTTTCTGGAGCATCATAATGGGTTTTTCTACATCCTTACTAATGCACCCTTAGAAGGTACTGAAACAGCAAATGGTGGTTACTACCTGGCCAGGTGCAGAGCTGAAAAGTCAGAAATGGATAAATGGCAGGTTGTTGCACTCCCTGGATCATATTATACCTTTCAGGATATGGACATTTTTCATGAACAATTAGTTCTATTTATTCGAAAAAGCGGTCTTCCTCTTATTTGCTCCATCAATTTGCCAATTGATGTTGACTTTCAGGAGCAAAAGGAACTTGATGATCTTGATCCATGGTTTTTCCCTGTACCGTCAGACTTATGCAGCATTGTTCCTGGATCCAACAATGACTTCATGTCATCTACTTATCGTCTGGTTTTGTCATCACCAGTGCTTCCAGACTTAACAGTGGACTATAACATGAGAATGAGGACATTTGCAATCCTTCACCAAGAGGAAGTAACTGGCCTTTCCTCAAATCTATGCACAGTTGGGCTGCAATCCAATATTACAGGCATCCAACAAAACCTTCAGCTTATTGAAGACTCACAGAGTTGGAGTGATCTATCCAAGCTATTTTCTTGTGAAAGGGTCCAAGTTATTTCACACGATGGTGTCTCAGTACCTTTAGTGATCCTGTATTCACGGGAAGCACATCGTCGTGGAGAATCACCTGGCGTCTTGTATGGATATGGAGCTTATGGAGAAGATCTGGACAAGAGCTGGTGTTCTGATAGGTTAAGTCTGCTTGCTCGAGGTTGGGTTGTCGCATTTGCAGACGTTAGGGGTGGTGGGGATTCATCATGGCATCTTGCAGGCACCAAAGCTAACAAGATAAATTCTATCAAAGATTTTGCTGCATGTGGTACACATCTCATCAAGGAAGGATTTGTTCACAAAAATAGACTTTGTGCTATAGGTTGCAGTGCTGGTGGCCTGTTGGTTGGTGCAGTCATCAATATGCTGCCGGATTTATTTTCTGCTGCAGTTCTAAAGGTCCCTTTTCTTGATATCTGCAATACAATGATGGATTCTACTTTGCCTCTAACCATCTTGGATTATGAAGAATTTGGTGACCCTAATATCTCCACTGAATTTGATACTATTCGTAGTTATTCTCCTTATGACAATTTATCTCCTGACATGTGCTACCCACCGGTCCTGGTAACTGCCTCATTTAATGATACAAGGGTAGGAGTCTGGGAAGCTGCTAAATGGGTTTCAAAAGTGAGAGATATTACATGCCAATCCTGTTCCTGGTCTGTCATTCTCAAAACTAATATGCAAAGTGGTCATTTTGGTGAGGGTGGACGCTTCATGCATTGCGATGAGACAGCTTTTGAGTATGCATTTCTCATGAAAGCCTTGGAGTTGGATGACAATGACAGCTGCAAAATAGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MLRRRHHLPAVLRLLSTSCRRGHPTQPPQHPSPAPLPLPPPVAKKVPFTASAHGRSWSDPYHWMRDTSDPDLAALLEAENAYADAFVDSAGEGGGGLRARLAAEMRARLPPSAASPPQPWGPWLYYQYVPEGKEYPVLSRRLRSSGGLARAALDFISGSKKEQVLLDWNEIAEKFGYVHIGSCRISPDHRFLAYTLDISGDEFFSLEVKDIQSTNTIFSSPHKGIVSLAWSRNSDNLFYTVCDETLRPNQVLCKDLQSDQAGFLVFMEKDINCCVDITSTKDFKYVTINSNTRTSSEVHVMESGHVRGGLWPVQKRSDKVQYFLEHHNGFFYILTNAPLEGTETANGGYYLARCRAEKSEMDKWQVVALPGSYYTFQDMDIFHEQLVLFIRKSGLPLICSINLPIDVDFQEQKELDDLDPWFFPVPSDLCSIVPGSNNDFMSSTYRLVLSSPVLPDLTVDYNMRMRTFAILHQEEVTGLSSNLCTVGLQSNITGIQQNLQLIEDSQSWSDLSKLFSCERVQVISHDGVSVPLVILYSREAHRRGESPGVLYGYGAYGEDLDKSWCSDRLSLLARGWVVAFADVRGGGDSSWHLAGTKANKINSIKDFAACGTHLIKEGFVHKNRLCAIGCSAGGLLVGAVINMLPDLFSAAVLKVPFLDICNTMMDSTLPLTILDYEEFGDPNISTEFDTIRSYSPYDNLSPDMCYPPVLVTASFNDTRVGVWEAAKWVSKVRDITCQSCSWSVILKTNMQSGHFGEGGRFMHCDETAFEYAFLMKALELDDNDSCKIV</aaseq>

Gene Sequence

<dnaseqindica>1..368#1282..1439#1579..1801#1895..2036#2144..2347#2748..2882#3181..3309#3682..4073#4606..4816#5013..5206#5377..5590#ATGCTCCGCCGGCGCCACCACCTCCCCGCCGTCCTCCGCCTCCTCTCCACTTCCTGCCGCCGCGGCCACCCCACGCAGCCGCCGCAGCATCCGAGCCCCGCCCCGCTCCCGCTCCCGCCGCCGGTGGCGAAGAAGGTCCCCTTCACGGCGTCGGCGCACGGGAGGTCGTGGAGCGACCCCTACCACTGGATGCGCGACACCTCCGACCCCGACCTCGCGGCGCTCCTCGAGGCCGAGAACGCCTACGCCGACGCCTTCGTCGACTCCGCCGGCGAGGGCGGCGGCGGCCTCCGCGCGCGCCTCGCGGCCGAGATGCGCGCGCGGCTGCCCCCTTCCGCCGCCTCCCCGCCTCAGCCCTGGGGCCCCTGGTTCGTATTGCTCCATTCCGTTTGGTACTGTAGTTTGGTCACGCACGCACTGTGTGGATTGGAACTGTATCGCCGCTATACCTAATTTAGCTATGGCCTGTGATTGTGAAGCTGCTTCAGTGATGGAAACACAACACAATGCACAAATCTACGGGAATAGTAGCAGTTACTGTAGTTTCACAAACTTTTGATTTTGTAGTTTTGAGGTTTACGCATTTGGGATGATTCTATGGTGTTAGCTTTGCGGATTCGTTTGGACCTAGGAGTGAGGCTGATTCTGTGATGGAAACACTCGTAAGTCTACATGAATAGCAGTTGCTGTAGTTTCACAAACCTCTGGCTGCTTCTGTAGTGTTGAGATTTATGCATCTATTTCATTTTTTGCATAGCTAAGCCAGATATTGACTGGCTTGGCTGCATTGGGATGTAGAGTTATTTTGAAGGACACTCAGGAGCGATCTGTTTTATTATTGCCTTTTGCTTTTGTGTGCTTAAATGAGTTAACTGTTCCAGTGTAACGTTACGGTTGGTTTTCCAATCCTTGTAGTGTAATATACTGAGATTGTTTTACTTGCCTTTGCACCACTGAAATGCGCTTCCATTTTTGGCTCTTTTGATTATGTCAGATGGAAGGCTGCGTTGCAAATCGAAATTTTACATGCTAGTGAGGACATGTTTTTATTGGTTTGATCAGGCCTAGTTTTCTTGGAGATATCACATTCCGTGTATATGTCTATGGTTGGAAACAAGTTCAAATATAAGACAGGAAACCAAAGAGCTTTATATTATGTTTTGTTGCTGCAATATTTTTATATCAAGTTAAATGATACCATTCAATATACTGTTCTTATTTGAATTGAGCATTTCATACTGTAAATCCAGAATTATAACATAACTTGCTCTGTGGATCCAGGTTATATTACCAGTATGTTCCAGAGGGTAAGGAATACCCAGTTTTATCCAGAAGATTGAGGTCTTCTGGTGGTCTAGCAAGAGCTGCCCTTGATTTCATTTCTGGTTCAAAAAAGGAGCAGGTGTTGCTTGACTGGAATGAGATTGCAGAAAAATTTGGTGTGTGCTATATTTATGCAGTATTGTCTGGACTCTGCATGCTTAACAAATTAAGCTACTCATTACTGATCATCATAGTAAGGATTATTTATTTACCTAGATATGAAAAGTTCATCATTTGGTCTTGAAACTTATGCAGGTTATGTGCACATCGGGAGTTGTCGAATCTCTCCTGATCATAGGTTTCTCGCATATACTCTTGATATATCTGGGGATGAGTTCTTTTCCTTAGAAGTGAAAGATATTCAGTCGACAAACACCATTTTTAGTTCACCCCACAAGGGAATAGTTAGCTTAGCATGGTCTCGCAACAGCGACAACTTATTTTACACAGTCTGTGATGAGACTCTACGACCTAATCAGTAATTTCCCTTTCCTGCAAAAATCAATGTCTGATAAGCTTATGAAACTTGTAAGGATACGTTTGATGTTTTTGATATGTTTGCATGTTATAGGGTTCTCTGTAAAGATCTGCAATCAGATCAGGCAGGTTTTTTGGTTTTCATGGAGAAAGATATAAACTGTTGTGTGGATATCACAAGCACAAAAGATTTCAAGTATGTCACTATCAATTCAAACACTAGGACATCATCCGAGGAAGGTTTCTTTTTCAGCTCTTTTCATCTAAAATGCATTTTGCCACCTTCACGCCACTTTGTTTCTCTTTTACTCTTATTTCTTCTCATGTGGTCATGTCATTGCAGGTGCACGTGATGGAGTCTGGTCATGTAAGAGGTGGCTTATGGCCCGTACAGAAACGTTCTGACAAAGTGCAGTACTTTCTGGAGCATCATAATGGGTTTTTCTACATCCTTACTAATGCACCCTTAGAAGGTACTGAAACAGCAAATGGTGGTTACTACCTGGCCAGGTGCAGAGCTGAAAAGTCAGAAATGGATAAATGGCAGGTCTATCTCTCTCTCTGTCTCTGCCTGGCCTTACGTGCGTGCGTGTATGTGTTTGTAGGGAAAGAGTGGGGGGGGGGGGGGAATCACCTGTCCACATTGCAAATCTGATGAAGAAAGTCAAATTTAAGGAATTGTCCCCACCACACTTTGAAAATCTGCTGCGTTGATTGGAGTACATACATTAAAGCAGCAAGTAGAGCAATGATTACTAGCTCTTCTTTCCGTCTAATGATGCCAATGAAAGCCGATCCTGTGAAATGTACAAGTTTAGTTTAATGCACTAATCTAATAATCTGTATCATGGGTATTTCATTTCCTGGCTCGTAAAGATTGATTCTAATATCGCGAGAAATCAGAGTCCTTACTTTTTAAATTTTGGTGTTTCAATGGCTGTTTCTAGGTTGTTGCACTCCCTGGATCATATTATACCTTTCAGGATATGGACATTTTTCATGAACAATTAGTTCTATTTATTCGAAAAAGCGGTCTTCCTCTTATTTGCTCCATCAATTTGCCAATTGATGTTGACTTTCAGGTATATTCTTTGGCTCAGCTCTTGTTAAATTTGTTATACAATTTGCTTGTACTGAGGTGAGCAAGACATTTAATAGGCAACTTTGTTTTTGGACCATAACATTTTAATGATTTAGCTCACTGAAAGACCTGCTTGTTGAATGCAATGAATCATCTAGGACCACGTAGCTTCATCTAACGCACTTCTAGTCTTCTAGCTGACAAGTACTTTGATTTTCAATGTTAGATTTGTTCTATTATGCTCTTTGATTGTTTTATTATGTTCAAATATTTGATACTGTTACTAATGTGATTTGTAGGAGCAAAAGGAACTTGATGATCTTGATCCATGGTTTTTCCCTGTACCGTCAGACTTATGCAGCATTGTTCCTGGATCCAACAATGACTTCATGTCATCTACTTATCGTCTGGTTTTGTCATCACCAGTGGTAAGTCATTCCTGCCCTTACTTTGTTATACTTTCTGCATGAATGGAGATTCTTTATTCCATGCCCATGTTACCTCTTGTTTTCTTGATGACTTGCTGTCCAGGATTTGATGCTGCAGTTTATATTGTAGATCCCATGAAATTCTGTTGTGCACATTCAGACATGGGCTATCTCTTTATGTTCACGTAGTGTCACACAATGGCACTAACCATACAACCCAAAATATTAAAAGAAAAAGAGTTTCACAATAAATTCTGTCTACTTGCAATACTTATTGTGTTAATTGAGCAAGTTGATGTTACAATGCAAGCGATGGATAACTGAAGCCAGAGATAAATTTTGTTTCCATAATCTTTAATTTTCTTACTGTAGCTTCCAGACTTAACAGTGGACTATAACATGAGAATGAGGACATTTGCAATCCTTCACCAAGAGGAAGTAACTGGCCTTTCCTCAAATCTATGCACAGTTGGGCTGCAATCCAATATTACAGGCATCCAACAAAACCTTCAGCTTATTGAAGACTCACAGAGTTGGAGTGATCTATCCAAGCTATTTTCTTGTGAAAGGGTCCAAGTTATTTCACACGATGGTGTCTCAGTACCTTTAGTGATCCTGTATTCACGGGAAGCACATCGTCGTGGAGAATCACCTGGCGTCTTGTATGGATATGGAGCTTATGGAGAAGATCTGGACAAGAGCTGGTGTTCTGATAGGTTAAGTCTGCTTGCTCGAGGTTGGGTTGTCGCATTTGCAGACGTTAGGTATAGTTTCTATTAAGCTTACATATCTGCACTTTCCATCATCTTTCAGTATTTCCTATTTTGTCCTTTTGCCCTGTTGCTACATTTTGAGCTGTGCCTTTTCATTTGATGAATCGGGATTTCAGGCATTGTTTATTCTTGTGCAAGGAATCCCAGCTTTCTTATTCCTATCAATATAGTAGGTTTGGACATTCGGTGATCCCTCTCTCGAGGGAGAAAGGAGTCAAGGGCTCAAGAGTAATCTACCAGAATTATGAAAACTGCCTATTTAGAGTCTTCTAGTTCTAGTTTTTATTTTCCTTTTAATCCAGTGGAGTTACAAGGTACAGAACTTTGAATGGTCTGCATGGAGTTTGAGCTGAAAAGTTGCATGTAGAATGATCCTAGCTGCCACAACAGAATAATGTAGTTGTTTTAATTCATTTTGTTTTTGATATTCTTTATTAAAGCAAAGTAATGTAATACCTTTTTAATTGGAAACTGCAATTTTTGTGTTGCATGCTGATTGTGGTTCTTGAGCTTAATCGTGCAGGGGTGGTGGGGATTCATCATGGCATCTTGCAGGCACCAAAGCTAACAAGATAAATTCTATCAAAGATTTTGCTGCATGTGGTACACATCTCATCAAGGAAGGATTTGTTCACAAAAATAGACTTTGTGCTATAGGTTGCAGTGCTGGTGGCCTGTTGGTTGGTGCAGTCATCAATATGCTGCCGGATTTATTTTCTGCTGCAGTTCTAAAGGTAAATCTTTGACATCATCTTCTAATGTGTCAATACATTGCTACTCAAAAGAGAAGAAAATTCCTGGACTACAGTAAATAATTCAAGCGGTAATGGAATTTCATTATGCCTTTATTGTCTCTACGATGTTCATTTCTGCTAGTAAATTATGTGTCTGGTCTTTCATACATTATTAGTAACATGATTTTGTAAACAGGTCCCTTTTCTTGATATCTGCAATACAATGATGGATTCTACTTTGCCTCTAACCATCTTGGATTATGAAGAATTTGGTGACCCTAATATCTCCACTGAATTTGATACTATTCGTAGTTATTCTCCTTATGACAATTTATCTCCTGACATGTGCTACCCACCGGTCCTGGTAACTGCCTCATTTAATGATACAAGGTTTTGCTCTACTCCATTTGCTACTCTTGAGATTCATTTCCGTACACTTTGGATCAAGCTTGTTCTGCATTTGACTGCCAGCTCATCTTTTGTATTATTTCTCCTTTCAGCTCAAATCACTATTAATTTTCTCGTAAATCCTTGAATTTCTCATTTTCTTTTACTTTCAGGGTAGGAGTCTGGGAAGCTGCTAAATGGGTTTCAAAAGTGAGAGATATTACATGCCAATCCTGTTCCTGGTCTGTCATTCTCAAAACTAATATGCAAAGTGGTCATTTTGGTGAGGGTGGACGCTTCATGCATTGCGATGAGACAGCTTTTGAGTATGCATTTCTCATGAAAGCCTTGGAGTTGGATGACAATGACAGCTGCAAAATAGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029590