BGIOSGA029594

From RiceWiki
Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029594| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029594, complete gene.| tag = OsI_317...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029594

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029594, complete gene.

LocusTag

OsI_31743

Ensembl Transcript ID

BGIOSGA029594-TA

Ensembl Protein ID

BGIOSGA029594-PA

Length

4345

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16804385..16808729

Sequence Coding Region

16808460..16808729,16808178..16808251,16807935..16808060,16807755..16807848,16807581..16807664
,16807303..16807446,16807061..16807177,16806911..16806961,16806744..16806824
,16806492..16806596,16806265..16806405,16806072..16806164,16805877..16805954
,16805544..16805798,16805349..16805451,16805091..16805265,16804895..16805000
,16804672..16804761,16804385..16804582

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16804385..16808729 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16804385..16808729 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGCGCTGAGCAGGAGCCTGGGGGCGTCGTCCGTTGCGGCGCTGAGGCCGACCCCGTCGCGGGGCCGGGGTCCCACGCTGCGGAGCGCGGTCGCGGTGCAGGGGAGGGGAGCGGCGGCGGTGGCCGCGAGAGGGGTGAGGTGGGAGGCCGGGAGGAGGAAGGGGAAGGGGAGGATGGTCGGGGTCAGGTGCGAGGCCGCCGTCACCGAGAAGCCCGCCGGGGAGGAGGAGGCGGCCGGCGAGCAGTTCGAGTACCAGGCTGAGGTCAGCCGATTGCTGGATTTGATTGTCCACAGCCTGTATAGCCACAAGGAGGTTTTTCTCCGTGAACTCGTAAGTAATGCAAGTGACGCGCTGGATAAGCTGAGATTTCTCAGTGTAACTGATTCCTCTGTATTGTCCGATGGCGGTGAGTTGGAAATTAGGATCAAACCCGACCCAGAGGCTGGCACAATTACTATCACTGATACTGGCATTGGGATGACCAAAGATGAACTCAAAGATTGCCTTGGAACCATCGCCCAAAGTGGCACCTCCAAATTTTTGAAGGCTCTTAAGGAGAACCAAGATCTTGGTGCAGATAATGGACTTATTGGTCAATTTGGTGTGGGATTTTATTCGGCTTTTCTTGTTGCAGAGAAGGTTGTGGTTTCCACTAAGAGTCCAAAGGCAGACAAACAGTATGTATGGGAAGCTATGGCTGACAGCAGCTCATATGTTATTAAGGAAGAAACCGATCCTGAGAAAATGTTGACACGCGGAACACAGATTACTCTGTTTTTAAGAGATGATGATAAGTACGAGTTTGCTGACCCTGGACGTATTCAAGGTTTAGTTAAGAACTATTCCCAGTTTGTTTCATTCCCCATATATACATGGCAGGAGAAATCAAGAACAGTTGAGGTTGAAGAAGAAGAAGAAGAAGAACCGAAAGAAGGTGAAGAGGCAACAGAGGGTGAAAAGAAGAAGAAAAAGAAAACAATCACTGAGAAGTACTGGGATTGGGAATTGGCTAATGAAACAAAGCCCATATGGATGAGAAATCCAAAGGAAGTTGAGAAAACTGAGTACAATGAATTCTACAAGAAGGCATTCAATGAGTTTTTGGATCCTCTTGCTTACACCCACTTTACAACAGAGGGTGAGGTGGAATTCAGGAGCGTCCTCTACATTCCAGGAATGGCACCTCTTAGCAATGAGGAGATAATGAACCCTAAGACCAAGAATATCCGGCTGTATGTTAAGAGAGTCTTCATATCAGATGACTTCGATGGCGAGTTGTTCCCTAGATACTTAAGCTTTGTAAAGGGTGTAGTGGACTCAAATGATCTTCCTCTCAATGTTTCCCGTGAGATTCTTCAAGAAAGTCGTATTGTCAGGATCATGCGCAAAAGACTTGTCAGGAAGACATTTGATATGATTCAGGAGATTGCTGAGAAAGAGGACAAGGAGGACTACAAAAAATTTTGGGAGAGTTTTGGCAAATTTGTTAAACTTGGCTGCATTGAGGACACAGGAAATCACAAACGCCTTTCTCCTCTGTTGCGGTTTTACTCTTCCAAAAATGAGACAGATTTGATAAGTCTTGATCAGTATGTAGAGAACATGCCAGAAAACCAAAAGGCAATCTACTACATTGCTACAGACAGTCTTCAGAGTGCAAAGACTGCTCCTTTCTTGGAAAAGTTGGTTCAAAAAGACATTGAAGTTCTCTACCTTATCGAGCCGATTGATGAGGTTGCCATTCAGAATTTACAGACATACAAAGAGAAAAAATTTGTTGATATCAGCAAAGAAGACCTGGAATTGGGTGATGAAGATGAGGACAAGGAAAATGAGAGCAAGCAGGAATACACTCTTCTATGTGACTGGATAAAGCAACAGCTTGGTGACAAAGTTGCCAAGGTTCAGATATCAAAACGGCTTAGCTCTTCGCCATGTGTTCTTGTATCTGGCAAATTTGGTTGGTCAGCAAACATGGAAAGGCTTATGAAGGCACAAACTCTTGGTGATACTTCAAGCTTAGAGTTCATGAGAGGAAGAAGAATTTTTGAAATCAACCCCGACCACCCAATTGTCAAGGACTTGAGTGCTGCTTGCAAAAACGAGCCTGAAAGTACCGAAGCCAAGAGGGCCGTTGAGCTGTTGTACGAGACTGCGCTGATCTCCAGTGGATATACTCCTGACAGCCCAGCTGAGTTGGGTGGCAAGATCTACGAGATGATGACCATCGCTCTTGGCGGGAGATGGGGAAGACCGGAGGAGTCTGAAGCCGCCACCAGCGAATCCAACGTTGAGGTAGAGTCTTCTGAAGGTTCCGCGACGGAAGTTGTTGAGCCCTCTGAAGTGAGGCCCGAGAGTGATCCATGGAAGGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAPALSRSLGASSVAALRPTPSRGRGPTLRSAVAVQGRGAAAVAARGVRWEAGRRKGKGRMVGVRCEAAVTEKPAGEEEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSDGGELEIRIKPDPEAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENQDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVWEAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQFVSFPIYTWQEKSRTVEVEEEEEEEPKEGEEATEGEKKKKKKTITEKYWDWELANETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLSNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQEIAEKEDKEDYKKFWESFGKFVKLGCIEDTGNHKRLSPLLRFYSSKNETDLISLDQYVENMPENQKAIYYIATDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEDKENESKQEYTLLCDWIKQQLGDKVAKVQISKRLSSSPCVLVSGKFGWSANMERLMKAQTLGDTSSLEFMRGRRIFEINPDHPIVKDLSAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGGKIYEMMTIALGGRWGRPEESEAATSESNVEVESSEGSATEVVEPSEVRPESDPWKD</aaseq>

Gene Sequence

<dnaseqindica>1..270#479..552#670..795#882..975#1066..1149#1284..1427#1553..1669#1769..1819#1906..1986#2134..2238#2325..2465#2566..2658#2776..2853#2932..3186#3279..3381#3465..3639#3730..3835#3969..4058#4148..4345#ATGGCGCCGGCGCTGAGCAGGAGCCTGGGGGCGTCGTCCGTTGCGGCGCTGAGGCCGACCCCGTCGCGGGGCCGGGGTCCCACGCTGCGGAGCGCGGTCGCGGTGCAGGGGAGGGGAGCGGCGGCGGTGGCCGCGAGAGGGGTGAGGTGGGAGGCCGGGAGGAGGAAGGGGAAGGGGAGGATGGTCGGGGTCAGGTGCGAGGCCGCCGTCACCGAGAAGCCCGCCGGGGAGGAGGAGGCGGCCGGCGAGCAGTTCGAGTACCAGGCTGAGGTGGGGCTGACGAGTCCGCGTCTAGGTCGAATGTTGGATTTGGCTTCTTCTGCGAAATGCCAGTGTTGATTGATATGCGTTTTTGGAATTCGTGTTTAGATAACTGAAGCTGACATTGTCATGAACTGTTCCTACAATCTGCTTATTGTTTTTAGAATTTGTAGCTCGAGGATTAGTTGGTCATGCAATGTTTCTCCTTGTCCTGCAGGTCAGCCGATTGCTGGATTTGATTGTCCACAGCCTGTATAGCCACAAGGAGGTTTTTCTCCGTGAACTCGTAAGGTTAGTTTTCTACTCATTGTTAGGGTTTTTAAATTAGTCGCGCCCAAGGAGGAATCACTATCCACAAACTGCAATTCAGTACCATTTGATGCTGACACATTTTATGTTTCCCCTCAGTAATGCAAGTGACGCGCTGGATAAGCTGAGATTTCTCAGTGTAACTGATTCCTCTGTATTGTCCGATGGCGGTGAGTTGGAAATTAGGATCAAACCCGACCCAGAGGCTGGCACAATTACTATCACGTGAGTTCTATTTTTATCCACTAATCATTTTAAGCATCAATTGCACTGGAACTCGTCAGGCGATCTCATTGTTTTGCATATTACAGTGATACTGGCATTGGGATGACCAAAGATGAACTCAAAGATTGCCTTGGAACCATCGCCCAAAGTGGCACCTCCAAATTTTTGAAGGCTCTTAAGGTGCACTTTGCCCACATGTAGTCACATATGTGTTGCGTTCTATTATTATTATTATTTGTTGCTGCCATGCTAAACCCTGCTTCTTATCAGGAGAACCAAGATCTTGGTGCAGATAATGGACTTATTGGTCAATTTGGTGTGGGATTTTATTCGGCTTTTCTTGTTGCAGAGAAGGTACACAATATCCCAAGGTTTTTTTTTTTTGGATTTTCAATGCTTGTAAAACCTTCCCTCTCAAATTGAATATTGGATTGAATTTACAATTAGAAAATGTTACTCTAGCTTGTTGTCGTTTCATTTCCTTGCAGGTTGTGGTTTCCACTAAGAGTCCAAAGGCAGACAAACAGTATGTATGGGAAGCTATGGCTGACAGCAGCTCATATGTTATTAAGGAAGAAACCGATCCTGAGAAAATGTTGACACGCGGAACACAGATTACTCTGTTTTTAAGAGTGAGTAGCTTATACTAACTCACCAGTACACAACTATGTATATGTGATTAAATTCACTTCCTAGCACATTGTTTACTAATTTTCATTTCGTAGCACATCTTTAACTATCTCTTTTGTTCTTTTAGGATGATGATAAGTACGAGTTTGCTGACCCTGGACGTATTCAAGGTTTAGTTAAGAACTATTCCCAGTTTGTTTCATTCCCCATATATACATGGCAGGAGAAATCAAGAACAGTTGAGGTAGAGAAAGACCATGCTAGAATCCTTCTGAATCCTGAGTATTACTGCAGTTCGTGCTTACTAAATTTCCACTCTCCTTTTCCCTGTTTGTGTACCTAGGTTGAAGAAGAAGAAGAAGAAGAACCGAAAGAAGGTGAAGAGGCAACAGAGGTTAGTTTCCTGCGTAATTTTGTTGCCTTCATGTTGAAGTTGTCTCCAGTATATTTGTATGTGATGTATTTCCCTTTGTTCGATAGGGTGAAAAGAAGAAGAAAAAGAAAACAATCACTGAGAAGTACTGGGATTGGGAATTGGCTAATGAAACAAAGCCCATATGGGTAAGGCAACACCTGATTAGTTTGTTACCTAGAATTGGTGCCTCCGCTGCAGTTATAACATGAAACATGTCTTTGATTTTCTCAATCTCCCATAGCTGCATGAACAGATATGTGTTCTATTATTAATGGAAATTTTCTTCCATGCAGATGAGAAATCCAAAGGAAGTTGAGAAAACTGAGTACAATGAATTCTACAAGAAGGCATTCAATGAGTTTTTGGATCCTCTTGCTTACACCCACTTTACAACAGAGGTGCCTGGACTTGTCAAACTATACTTGTTTGTGTTTATCATTTTCATGCGTAGAAACATTCATGATGAAACGGATGTTCTGAACAGGGTGAGGTGGAATTCAGGAGCGTCCTCTACATTCCAGGAATGGCACCTCTTAGCAATGAGGAGATAATGAACCCTAAGACCAAGAATATCCGGCTGTATGTTAAGAGAGTCTTCATATCAGATGACTTCGATGGCGAGTTGGTATGTTGCTGTATTTTTTACTGCTCTGTTTACATTATAGCTAGACGTTAGTTCTTCCGTTACTATGATAATAATGTTGAATGAATTACTCTCTTTGCAGTTCCCTAGATACTTAAGCTTTGTAAAGGGTGTAGTGGACTCAAATGATCTTCCTCTCAATGTTTCCCGTGAGATTCTTCAAGAAAGTCGTATTGTAAGTTCTGGATATAATACATCTGCGGTTTAACTTATAATTACTGCTTACTAGACTCTGGGGAGTTATTGATGTCTGAATAATAACAGTTCGCTGATTGGGATCCTAATGTTTCAGGTCAGGATCATGCGCAAAAGACTTGTCAGGAAGACATTTGATATGATTCAGGAGATTGCTGAGAAAGAGGACAAGGAGGTTAGAACCAGACTTCTCTTTCCCAAGATGTTGATGTTTTGGGCCTTTTTTTTATGCATGTTGTTGTTTGTATTGCAGGACTACAAAAAATTTTGGGAGAGTTTTGGCAAATTTGTTAAACTTGGCTGCATTGAGGACACAGGAAATCACAAACGCCTTTCTCCTCTGTTGCGGTTTTACTCTTCCAAAAATGAGACAGATTTGATAAGTCTTGATCAGTATGTAGAGAACATGCCAGAAAACCAAAAGGCAATCTACTACATTGCTACAGACAGTCTTCAGAGTGCAAAGACTGCTCCTTTCTTGGAAAAGTTGGTTCAAAAAGACATTGAAGTAAGAGCACGATTTTTATTTACCATTTACCAAAGGTTTGTTGTTTGCTTGTGCTACAGTTCTGGCTCAGAGGCACACTTTTCCTTTTTCAGGTTCTCTACCTTATCGAGCCGATTGATGAGGTTGCCATTCAGAATTTACAGACATACAAAGAGAAAAAATTTGTTGATATCAGCAAAGAAGACCTGGAATTGGGTAATGGAATTTTGATGCGGTTGGCTATAAGTTTCCCCTGTTATGCCATCACATTTACTTACGTTGGCTCTTGGCTGCTACAGGTGATGAAGATGAGGACAAGGAAAATGAGAGCAAGCAGGAATACACTCTTCTATGTGACTGGATAAAGCAACAGCTTGGTGACAAAGTTGCCAAGGTTCAGATATCAAAACGGCTTAGCTCTTCGCCATGTGTTCTTGTATCTGGCAAATTTGGTTGGTCAGCAAACATGGAAAGGTACTCATAATGTTTTATAGATTTAATACAATTAGATCATCACCTAAAAATCTGTATTTTTTTCTAATGCTTGTTTATTTAAATTGACAGGCTTATGAAGGCACAAACTCTTGGTGATACTTCAAGCTTAGAGTTCATGAGAGGAAGAAGAATTTTTGAAATCAACCCCGACCACCCAATTGTCAAGGACTTGAGTGTAAGAGTTACTGTACCCTGCTAGTTCTTATACCTTGCCACATGCCTATCTTGATATAGAGCTTTCGTCCATATGTCATCCCCCCTTTATAAGAGGTTGGTCGACTAATCCTTTACAACAAACACAATTGCAGGCTGCTTGCAAAAACGAGCCTGAAAGTACCGAAGCCAAGAGGGCCGTTGAGCTGTTGTACGAGACTGCGCTGATCTCCAGTGGATATACTGTAAGTGCAACAAAAACTATGCTTGTACACACGCTTTTATGATAACGAATGTTGCTATTTCCTCATGTTTCTTCATTTGCATCATCCAGCCTGACAGCCCAGCTGAGTTGGGTGGCAAGATCTACGAGATGATGACCATCGCTCTTGGCGGGAGATGGGGAAGACCGGAGGAGTCTGAAGCCGCCACCAGCGAATCCAACGTTGAGGTAGAGTCTTCTGAAGGTTCCGCGACGGAAGTTGTTGAGCCCTCTGAAGTGAGGCCCGAGAGTGATCCATGGAAGGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029594

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA029594&oldid=28798"