BGIOSGA029598

From RiceWiki
Revision as of 09:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029598| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029598, complete gene.| tag = OJ1509_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029598

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029598, complete gene.

LocusTag

OJ1509_C06.25

Ensembl Transcript ID

BGIOSGA029598-TA

Ensembl Protein ID

BGIOSGA029598-PA

Length

4982

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16744662..16749643

Sequence Coding Region

16748895..16749643,16747569..16747701,16745500..16747497,16744662..16745054

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16744662..16749643 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16744662..16749643 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGACGGAGGTGGCCCCGATGGTGGACATGCGGGCGCTGTCCCAGTCGGATCTCGTGGCGCTGGCGGCGGGGTCGCCCTACTCTGCCGACCCGCGCCGCGGCCGCGACGCCGACGTCCTCCCGCCACCGAAGATCGATCGCGCCGTCTTCAATGAGAGCGCCGGCTCCCGTAAGCAGACCTTCTCCCGCCACCGCGTCGCCACCAACCTCTCCCACAGCCTGACCCCGGCCACCGCTTCCGCCGCCGCCGCCCCCGCCCCCGCCCCCGCCGACGAGGACTCCGAGAACCGCCTCATCGCGTTCCACCTCCAGCGCCTCTTCGCGGGCGAGGACCCCTCATTCGCATCCCCGCCCCAGATTGCACCGCAACCCCAGCCGCAAACCCTAATCACGCCCGCGATTGCCGCTGCCGTGACCCCCGCGCCCTCCCTGCCGACGCCGCCTCCCTCGAACGCCGACATGGAGGTGATGAATCCGAATGGGGTGGCGGTCGATCTGGCGAGGCTCGCGGAGCTGGTGGATCCCTACGAAGAGGAGATGCGGAGGCGGACGGCGGGATTAGGGGCAGAATCCGAGCTATTAGGTTTCATGAATGGGCTTGAGGGTCAGTGGGGGAGCCGAAGGCGGCGGAGGAAATTCGTGGATGCCTCTATGTTTGGTGACCACCTGCCCCGTGGGTGGAAGCTGCTACTTGGCCTCAAGCGGAAGGAGCGTGTTGCTTGGATCAATTGCCGGCGTTATGTCAGCCCCAGCGGACATCAGTTTGCTACTTGCAAAGAAGTTTCTACCTATCTTATGTCTCTTCTTGGATATGTGGAGGCAAAGCCAACTGCCATTCAGAGCAGCGATGCAGAAGTGCTTGAATTAAACGCTGTTAATTCTGTAGGCCATTGCCAGCCTAATTCAACTGAGGAAAAGCAGAGTGCGCCTCCAGTTACATCTGTGCCTTTCTCCAGTCACCATGGTGATCCTCAGAGGCAACTTGATAAGAATGAAACTCAGGTGGAAGCAAATGGAAAAGAGTGCCAAAAGTGCAATTTGACTTTTCAGGACCAGAGTGCCTATGTGCAACATCAGTTGTCCTTTCACCAAAGGAAGGGTAAAAGGCGCAAGGTTAATAAGTCTGGTGAAGTGGGAGCCAACAAAAATGTAACAATTGTGACTCAAGAATGTCACATAACTTCTGAAGATAAACTGGGCAATATTGACCATAGTTTAGCTACCACAAAATCTCAAGGTCAAACACCAGAAAAAATGCCTGACGAGACCATTTCAGGAGAGTTAGGTGGTCGACCATCCATGGCACCAGAGCCAGTTGGTTTTCAAGAGACGAATGGCTTAACTGAACAGGGAAAAGAATCTTCTGCTGGTGAACTTCTCTCTGGACATTGTGATCCTCTTCACAATATGGCTGGTGTACCTGAGAAGGAAAAAGGATCTGCTGGAGAACCTGTCACTGGGAATCACGAGGACCCCATTGACAATTTCAGTGACCACAAAATCCTTGATGGAGCATGTCATAATGCTGAAGAGCCTCATGCTGTTGAAGCTGCAAGCGAATTTAATATTGGTAACTCTGCAAACTTACAGCAGACTGACAGCACGAAGGATTTAGTACTTTCCAATGCAGATTGCACCCAGAATGACAACATCACAAAGGATTTAGCTCCTAATCCTACAATTCCTCAAGGTGAAAGCAAGTGTATTGATGATCCGATGGAGTGTACTGATATGAAACCATCCAAAAAAGTTTCTGAGCCTTGTGATCTACTGGATGACAAATTTAGTAGTTTTCCTGAAGGAGCTAATTTTAATGGTCAGGAGGAAAATAGCCCACTTTCTGCTGCTTTGAATGAGCCTGATCTAAATTCGATTGACATGGAGGTAGACAATGACAATGTAGAATGCAAGTACGGGAATGCAGGCGATTCTACTAGTCCTGAAAATGGCAAACATATTGAAGATCAGATTATTGATTGCAGAATGACTTCTTTGAAAGATCATGAGATCAATACCGATGTCAGGATAAGAGATGTCAACCTCAATTCATGTTTAGATGCAATGTCTCCTCCTGTTTCTGGTGCAAATTATGAAACATCTAATGCCATAGATGACAATAATAGATCATCCATCATTGCCCAATGCTTTGGTGCTAATTCTGCCGATGACAATGCTTGTAAGGAGGAAAATTTTGTAAACAACCAGAGCAGTGTATCCAAGGCTGAAAGCTTCAACCAGAACAATGACATGATGTATCAACCTAATTTGACCATGGATCCTATCTCTCCTGCTCAAATTAATGTGGATTGTTTTACTTCTTGTTCAATGACATCTGAAATTAAGAACAATAGCAACAGACGTGAAGATAATGCCAAAGAACAGTTGGTGAATCCACGGAACATTACTAGCAATGATGCAGGTTTTGATGTTGAAGCTTACAGCAATATCTTCAATGGCGCTATCACAGAAAGTAGTCTTGCCCAGCTGAATAATGCAATAAACATGAAAGCTGATTATTCAAGCTGCTATTCGTTATCTGATCTGAACACACTGACTGGTGGTCCTGCAACTGATGAAATTGATATTCACAGTATGAGGAATAGTTTTGTTAATAGCTCCACCAGTCGAAATGAACCAAATGAACATTGCACACTGGATTTTGATATCAAGGGTTCCATGCTTGAGGCACTGGAAAAATCTGACAGTGACCTGGAGAATCAATACAATGGCAGCACTCGTCCTTGTGGCTCACTCCCTACAGCTGGCACAAGCGGAAGTATAGATGATTTTATGTCCTTGCAAACCAATTTTGGTAGCCTGACCTCTCTGGTTCGTTCTGTTGAAGATGGTCCAATGAGTAGAATTATTCAAGACCAGTGTGATTTGCAGCTTGGATTTGGTGTTCAGAAACCACAGATGTATCCTACCTTCGAGGAGCAGCTGAGGATGGCCTCAGCTGGAGCTCCACAGTTTGGGACTATGAACAGGCATAATCATGTACCTGTACCCGAACCAACACTGATGTTAGGTTATGCGCCGCACATTGGCAGCTGCCCTCCTGTCCAGTTAGGATGGGACATGTCCATGTCAAAGATGGTTGGCGGGTGTGTGCTCCAGTCGTCCATGTGTGTATGGTGCAACACTCAGTTCCAGCATTTTGGCACCGTTGCCGATCAGCAGGCTGATTCACTTGGCTTCATCTGTCCGGCGTGCAAGGAGAAAATCTCTGGTCATCTTAGCATGCTCAACAACAGTTCATCACAGCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MGTEVAPMVDMRALSQSDLVALAAGSPYSADPRRGRDADVLPPPKIDRAVFNESAGSRKQTFSRHRVATNLSHSLTPATASAAAAPAPAPADEDSENRLIAFHLQRLFAGEDPSFASPPQIAPQPQPQTLITPAIAAAVTPAPSLPTPPPSNADMEVMNPNGVAVDLARLAELVDPYEEEMRRRTAGLGAESELLGFMNGLEGQWGSRRRRRKFVDASMFGDHLPRGWKLLLGLKRKERVAWINCRRYVSPSGHQFATCKEVSTYLMSLLGYVEAKPTAIQSSDAEVLELNAVNSVGHCQPNSTEEKQSAPPVTSVPFSSHHGDPQRQLDKNETQVEANGKECQKCNLTFQDQSAYVQHQLSFHQRKGKRRKVNKSGEVGANKNVTIVTQECHITSEDKLGNIDHSLATTKSQGQTPEKMPDETISGELGGRPSMAPEPVGFQETNGLTEQGKESSAGELLSGHCDPLHNMAGVPEKEKGSAGEPVTGNHEDPIDNFSDHKILDGACHNAEEPHAVEAASEFNIGNSANLQQTDSTKDLVLSNADCTQNDNITKDLAPNPTIPQGESKCIDDPMECTDMKPSKKVSEPCDLLDDKFSSFPEGANFNGQEENSPLSAALNEPDLNSIDMEVDNDNVECKYGNAGDSTSPENGKHIEDQIIDCRMTSLKDHEINTDVRIRDVNLNSCLDAMSPPVSGANYETSNAIDDNNRSSIIAQCFGANSADDNACKEENFVNNQSSVSKAESFNQNNDMMYQPNLTMDPISPAQINVDCFTSCSMTSEIKNNSNRREDNAKEQLVNPRNITSNDAGFDVEAYSNIFNGAITESSLAQLNNAINMKADYSSCYSLSDLNTLTGGPATDEIDIHSMRNSFVNSSTSRNEPNEHCTLDFDIKGSMLEALEKSDSDLENQYNGSTRPCGSLPTAGTSGSIDDFMSLQTNFGSLTSLVRSVEDGPMSRIIQDQCDLQLGFGVQKPQMYPTFEEQLRMASAGAPQFGTMNRHNHVPVPEPTLMLGYAPHIGSCPPVQLGWDMSMSKMVGGCVLQSSMCVWCNTQFQHFGTVADQQADSLGFICPACKEKISGHLSMLNNSSSQL</aaseq>

Gene Sequence

<dnaseqindica>1..749#1943..2075#2147..4144#4590..4982#ATGGGGACGGAGGTGGCCCCGATGGTGGACATGCGGGCGCTGTCCCAGTCGGATCTCGTGGCGCTGGCGGCGGGGTCGCCCTACTCTGCCGACCCGCGCCGCGGCCGCGACGCCGACGTCCTCCCGCCACCGAAGATCGATCGCGCCGTCTTCAATGAGAGCGCCGGCTCCCGTAAGCAGACCTTCTCCCGCCACCGCGTCGCCACCAACCTCTCCCACAGCCTGACCCCGGCCACCGCTTCCGCCGCCGCCGCCCCCGCCCCCGCCCCCGCCGACGAGGACTCCGAGAACCGCCTCATCGCGTTCCACCTCCAGCGCCTCTTCGCGGGCGAGGACCCCTCATTCGCATCCCCGCCCCAGATTGCACCGCAACCCCAGCCGCAAACCCTAATCACGCCCGCGATTGCCGCTGCCGTGACCCCCGCGCCCTCCCTGCCGACGCCGCCTCCCTCGAACGCCGACATGGAGGTGATGAATCCGAATGGGGTGGCGGTCGATCTGGCGAGGCTCGCGGAGCTGGTGGATCCCTACGAAGAGGAGATGCGGAGGCGGACGGCGGGATTAGGGGCAGAATCCGAGCTATTAGGTTTCATGAATGGGCTTGAGGGTCAGTGGGGGAGCCGAAGGCGGCGGAGGAAATTCGTGGATGCCTCTATGTTTGGTGACCACCTGCCCCGTGGGTGGAAGCTGCTACTTGGCCTCAAGCGGAAGGAGCGTGTTGCTTGGATCAATTGCCGGCGTTATGTCAGGTTTGTTCATGTTGTGTATAGCTTGTTTCGGTAGTGGTGAACATCAGTTGTTAAGTGTCTTTTGTATGCATTGATGATTTGGGTTTTGTGTTTGAAGTGTGAAATGCAATGTGCTTGTCACAATCGTTTTTGCTGTCTATGATCTCCTTTTAAAGCTTAGTTTGTAAAGTGAGCCTCATGACAACAACATTAAGCTGATCTTGTCTATGATCTCCTTTTAAAGCTTAGTTTGTAAAGTGAGCCTCATGATAACAACATTAAGCTGATCTTAGAAACATAGGAACCACAACAATGGGTATTTGAATGTGTCGTAATCCAACTATTTGAGTTTTTCTTTTTCTTCCTTGTTTTTGGCTTTGTTTTCTTCCTTCCCTGGCATAGGCCGGTCTGGCTGATTGCATTGTGTAACAAACACTCTATTCCTCTAATATATTGACGTGCAATCCTTTTGCGCATTCGCAAAAAAAAAAGATGGTGGGCACAGCATCTGGACAGTGTTGCAAGATACTTTGTATCCAGATTTACCTTGCCTGTGGTAGTAACTAGTACGTGCATAGACAGTGAGCATATATTTCTTCTAATCAATAGTTAGTTGATCATGTTTCCTTCCCCACACCCATCCACCCACCTACGCTGTTATATCCAGTTGTCATTTCTACTGTTCAGTAACTAAAACATAATCAAGTGCTCGCCTTAATATGGCTGCCTCTATTAACCGTCATGCCTGAAACATGTATGATGATTCATAAGTTTAACTTTGTTTAAAGTAAGGATTCAACGGCATTGATCTGTTTGATAGTTCGAGCATTCTCGTCATGCTCATTTGTTGGACATTCTTTCTTTGCAAAGATATATTCTTACTCATCATGCTCTACATAATAGGTATATTTGCTCTCTAGAAAAAAAAACGTACTATACATATTTCGTTATTAATCATTACATTTTCAGACATGTTGATTTCTAGTCACTGAATGAAGAGGCTACCTTGTATTAGTAAATGTCTGTTAGGACAGTGCAATTTCTTAATATTGTCTTCATAGTATTTATTTTGAACTTGGTGCCATGTTCTTCATAATATGTGAATATCTGCTGGACTTGGAAGTTGGATCTCATTTATTGGAAGATTGTGTGTTTCATATTTTTGCTCACTACCATTATTTGATCTAGCTAATTGTCCATGATGTACTTGCCAGCCCCAGCGGACATCAGTTTGCTACTTGCAAAGAAGTTTCTACCTATCTTATGTCTCTTCTTGGATATGTGGAGGCAAAGCCAACTGCCATTCAGAGCAGCGATGCAGAAGTGCTTGAATTAAACGCTGTTAATGTAAGTCCTTTTAGTGCACCTTATATGCACAACTACCTTTCATGGTTTGACTAACTAAAATGTTCAATTAGTCTGTAGGCCATTGCCAGCCTAATTCAACTGAGGAAAAGCAGAGTGCGCCTCCAGTTACATCTGTGCCTTTCTCCAGTCACCATGGTGATCCTCAGAGGCAACTTGATAAGAATGAAACTCAGGTGGAAGCAAATGGAAAAGAGTGCCAAAAGTGCAATTTGACTTTTCAGGACCAGAGTGCCTATGTGCAACATCAGTTGTCCTTTCACCAAAGGAAGGGTAAAAGGCGCAAGGTTAATAAGTCTGGTGAAGTGGGAGCCAACAAAAATGTAACAATTGTGACTCAAGAATGTCACATAACTTCTGAAGATAAACTGGGCAATATTGACCATAGTTTAGCTACCACAAAATCTCAAGGTCAAACACCAGAAAAAATGCCTGACGAGACCATTTCAGGAGAGTTAGGTGGTCGACCATCCATGGCACCAGAGCCAGTTGGTTTTCAAGAGACGAATGGCTTAACTGAACAGGGAAAAGAATCTTCTGCTGGTGAACTTCTCTCTGGACATTGTGATCCTCTTCACAATATGGCTGGTGTACCTGAGAAGGAAAAAGGATCTGCTGGAGAACCTGTCACTGGGAATCACGAGGACCCCATTGACAATTTCAGTGACCACAAAATCCTTGATGGAGCATGTCATAATGCTGAAGAGCCTCATGCTGTTGAAGCTGCAAGCGAATTTAATATTGGTAACTCTGCAAACTTACAGCAGACTGACAGCACGAAGGATTTAGTACTTTCCAATGCAGATTGCACCCAGAATGACAACATCACAAAGGATTTAGCTCCTAATCCTACAATTCCTCAAGGTGAAAGCAAGTGTATTGATGATCCGATGGAGTGTACTGATATGAAACCATCCAAAAAAGTTTCTGAGCCTTGTGATCTACTGGATGACAAATTTAGTAGTTTTCCTGAAGGAGCTAATTTTAATGGTCAGGAGGAAAATAGCCCACTTTCTGCTGCTTTGAATGAGCCTGATCTAAATTCGATTGACATGGAGGTAGACAATGACAATGTAGAATGCAAGTACGGGAATGCAGGCGATTCTACTAGTCCTGAAAATGGCAAACATATTGAAGATCAGATTATTGATTGCAGAATGACTTCTTTGAAAGATCATGAGATCAATACCGATGTCAGGATAAGAGATGTCAACCTCAATTCATGTTTAGATGCAATGTCTCCTCCTGTTTCTGGTGCAAATTATGAAACATCTAATGCCATAGATGACAATAATAGATCATCCATCATTGCCCAATGCTTTGGTGCTAATTCTGCCGATGACAATGCTTGTAAGGAGGAAAATTTTGTAAACAACCAGAGCAGTGTATCCAAGGCTGAAAGCTTCAACCAGAACAATGACATGATGTATCAACCTAATTTGACCATGGATCCTATCTCTCCTGCTCAAATTAATGTGGATTGTTTTACTTCTTGTTCAATGACATCTGAAATTAAGAACAATAGCAACAGACGTGAAGATAATGCCAAAGAACAGTTGGTGAATCCACGGAACATTACTAGCAATGATGCAGGTTTTGATGTTGAAGCTTACAGCAATATCTTCAATGGCGCTATCACAGAAAGTAGTCTTGCCCAGCTGAATAATGCAATAAACATGAAAGCTGATTATTCAAGCTGCTATTCGTTATCTGATCTGAACACACTGACTGGTGGTCCTGCAACTGATGAAATTGATATTCACAGTATGAGGAATAGTTTTGTTAATAGCTCCACCAGTCGAAATGAACCAAATGAACATTGCACACTGGATTTTGATATCAAGGGTTCCATGCTTGAGGCACTGGAAAAATCTGACAGTGACCTGGAGAATCAATACAATGGCAGCACTCGTCCTTGTGGCTCACTCCCTACAGCTGGCACAAGCGGAAGTATAGATGATTTTATGTCCTTGCAAACCAATTTTGGTAGCCTGACCTCTCTGGTTCGTTCTGTTGAAGATGGTCCAATGAGTAGAATTATTCAAGACCAGGTAATTTCTCAAGATATGCTGACTTTTTGCAACATCCATGCTACTGCTTTAGCAATTGCCTAAAATTTTTCCCGTTCAATCTAGTAGAGCTGTTTAAGTACTACTCGAGTTATCCACACTGCAATCTACTCGAGCAATTGCCTAAAATTGCTCCCGTTCAATGGCATTTATTTGAATTCTGACTAATAATCGTTGAGTTATGCGGGTTCATTGGACACATTTGAAGGAACAAGAATGGCAGTTATTTTCTTGATAGCTGAAAACATGTAAAGTTTAAGATCACATAATGTATGTTCATGCAACTATTGCAGTAGATGAACTAATGCTATTTATTACTAAAATTTTATTGTAGGATCCCTAGATGACTCTTTAATTTAATTGTTTCACTTCAATTATATGATTGCACGCTGGAATCAGACATGCTAATTTGATTGTCTTTCAACAGTGTGATTTGCAGCTTGGATTTGGTGTTCAGAAACCACAGATGTATCCTACCTTCGAGGAGCAGCTGAGGATGGCCTCAGCTGGAGCTCCACAGTTTGGGACTATGAACAGGCATAATCATGTACCTGTACCCGAACCAACACTGATGTTAGGTTATGCGCCGCACATTGGCAGCTGCCCTCCTGTCCAGTTAGGATGGGACATGTCCATGTCAAAGATGGTTGGCGGGTGTGTGCTCCAGTCGTCCATGTGTGTATGGTGCAACACTCAGTTCCAGCATTTTGGCACCGTTGCCGATCAGCAGGCTGATTCACTTGGCTTCATCTGTCCGGCGTGCAAGGAGAAAATCTCTGGTCATCTTAGCATGCTCAACAACAGTTCATCACAGCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029598