Os10g0541000

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0541000| Description = Similar to Seven transmembrane protein Mlo2| Version = NM_001071724.1 GI:115483191 GeneID:4349258| Length = 4692 bp|...")
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Gene Name

Os10g0541000

Description

Similar to Seven transmembrane protein Mlo2

Version

NM_001071724.1 GI:115483191 GeneID:4349258

Length

4692 bp

Definition

Oryza sativa Japonica Group Os10g0541000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21564738..21569429

Sequence Coding Region

21565199..21565666,21565834..21565894,21565980..21566047,21566133..21566168,21566470..21566643
,21566746..21566786,21567026..21567075,21567538..21567626,21567705..21567779
,21568086..21568174,21568350..21568410,21568566..21568682,21568920..21569122
,21569240..21569297,21569406..21569429

Expression

GEO Profiles:Os10g0541000

Genome Context

<gbrowseImage1> name=NC_008403:21564738..21569429 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21564738..21569429 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcctcctccaccaccttggccagtggttcagcaagaggaggaagaaggcgctgttcgacgcgctggagaaggtcaaatccgagctgatgacgctggggttcatctcgttgctgctcagtgtcacggggaggtacatatcgcgcatctgcatcccggtgggagccgcggacaccatgcttccctgcagcctccggaggagttcttcagagcaggaggtgcccggtggtggtggccatggccggcgacacctatctggagatccaaccaattttaaatgcgccaaaggtatggtgtcgcttgtttcagctgatgggcttcaccagctgcatatcttcgtgttcttcctggcagtctttcatgtcgcattcagtgctattacaatgtctctgggtagagcaaagacacgtatatggaaggagtgggagaaggagacttgctcccttacctacgagttttcatatgacccctcaaagttcaggcttactcatcaaacgtcttttgtgaggcaacatgcaagctgttggagcaaaagtactattctgctctattttgtgagcttctttaggcagttcttcagatctgttagaaggacagactacctgactttgaggcacggattcattgctgctcatttatctctagggactaggttcaattttcggaaatacatcaaaaggtcactggaggacgattttaagacagttgttggcattagtgcacccttatgggcttctgcgttggccattatgctcttcaatgttcatggatggcataacttgttctggttctctacaatcccccttgtagtaactttagcagttggaacaaagctgcaggctataattgcaatgatggctgttgaaattaaagagaggcatacagtaattcaaggaatgccggtggtgaaactcagtgatgaacatttttggttcgggaagccacgtctggttcttcatcttatccatttcgcgtcatttcagaatgcatttgaaattacatacttcttttggatttggtacgaattcgggttgagatcctgcttccatgacaactttgagcttatcatcgccagagtctgccttggggttgtcgttcaattcatgtgcagctatatcacacttccactctatgctctcgtatctcagatgggttcacagatgaagagaacgattttcgacgagcagacggcgaaggccctgaagaaatggcacaaggcagcagtggtgaagaagaagcagcagaaggggtcatcccatgagccaggttcagagacaccgggcacggagacgacgacgacgacggcgacggcaacggaggagagccagcgagaacgcgacgccgcggccatgccggtgcgccacctccaccgctacaagaccatcgcccacgtcggcgcgacggggacgctgtccgactcggactgctccgacacggacacgccgttcgcgtcgccgacgaggctcctgataccgccgacaaagcagcggagcctcgacgccgggagggcggaggtgcgcgtggacgtcgactcgacgccgacgccgacaccaccggagcgccatgacagcttctccttcccgaggttgcctgctcacaatttgcagcagaaatga</cdnaseq>

Protein Sequence

<aaseq>GLLHHLGQWFSKRRKKALFDALEKVKSELMTLGFISLLLSVTGR YISRICIPVGAADTMLPCSLRRSSSEQEVPGGGGHGRRHLSGDPTNFKCAKGMVSLVS ADGLHQLHIFVFFLAVFHVAFSAITMSLGRAKTRIWKEWEKETCSLTYEFSYDPSKFR LTHQTSFVRQHASCWSKSTILLYFVSFFRQFFRSVRRTDYLTLRHGFIAAHLSLGTRF NFRKYIKRSLEDDFKTVVGISAPLWASALAIMLFNVHGWHNLFWFSTIPLVVTLAVGT KLQAIIAMMAVEIKERHTVIQGMPVVKLSDEHFWFGKPRLVLHLIHFASFQNAFEITY FFWIWYEFGLRSCFHDNFELIIARVCLGVVVQFMCSYITLPLYALVSQMGSQMKRTIF DEQTAKALKKWHKAAVVKKKQQKGSSHEPGSETPGTETTTTTATATEESQRERDAAAM PVRHLHRYKTIAHVGATGTLSDSDCSDTDTPFASPTRLLIPPTKQRSLDAGRAEVRVD VDSTPTPTPPERHDSFSFPRLPAHNLQQK</aaseq>

Gene Sequence

<dnaseqindica>3764..4231#3536..3596#3383..3450#3262..3297#2787..2960#2644..2684#2355..2404#1804..1892#1651..1725#1256..1344#1020..1080#748..864#308..510#133..190#1..24#ggcctcctccaccaccttggccaggtatgctgattccatttccaaaccccctcctgaatcattccgcttgttggtttcttccctctctttttttggctcgaggttctgatttgtgtgtttcttgggttgcagtggttcagcaagaggaggaagaaggcgctgttcgacgcgctggagaaggtcaaatccggtacattgcggcgtttctttcataaatttgttcttctttttcattttctgaatcgattgggctctcatcatctccgggtgaagctggaatttgatggaggtttacaaacatgtgcagagctgatgacgctggggttcatctcgttgctgctcagtgtcacggggaggtacatatcgcgcatctgcatcccggtgggagccgcggacaccatgcttccctgcagcctccggaggagttcttcagagcaggaggtgcccggtggtggtggccatggccggcgacacctatctggagatccaaccaattttaaatgcgccaaagtgagcaatttcttgtgtgctactagttcacatttttgcagaggcagaaattgtttctgttcttctgttcagctttacatgccgcaaagtgagcaattcttgtgtgctaggagttcacatttgttcagtggcaggagtcgtttctgatcttctgttcagactgcatctttcagatatgcctgatcattcctaagttgcgtttgttgacctctgaaaatgcaaatgacgacatggcagggtatggtgtcgcttgtttcagctgatgggcttcaccagctgcatatcttcgtgttcttcctggcagtctttcatgtcgcattcagtgctattacaatgtctctgggtagagcaaaggtaaggtcagtctaaaggtttgaacttcgtgaaggtttcctgtaccaggatcatgttattagtaccttctttgctattagttttatggacttatatggagtgaaaaagagaaaaaaaaacacaaagctgaaaccattctgaactcttctgtgtagacacgtatatggaaggagtgggagaaggagacttgctcccttacctacgagttttcatatggtaatgcactaatatctatctagataagttattgtttcatatgtttatgtgaaattcatgctagagcttagaacaaaatccatggtgcatgaagatcttttttgtttttttggcctcagggtggtccatatttcattctttttatttaagaatttgtttcacatttcaatttcagacccctcaaagttcaggcttactcatcaaacgtcttttgtgaggcaacatgcaagctgttggagcaaaagtactattctgctctattttgtaagtcttctcatggctcctgcctagctacttattgttaccagttagcatatactatattgttttacaatacttcaagttgtcatcttaatatacaacattaacttgaatctgccaggaaaccataaggttaatcatagatactggaaatcaaaagtttcaacttgaacagactacttattcccaggacaaattactgttgaaggaaaaaatggtttttcatgaatatatagcaaaaacaatagaaatgatgttttgcagtttctcatgggctttctatgactccatttgatgtgaaatatgtaggtgagcttctttaggcagttcttcagatctgttagaaggacagactacctgactttgaggcacggattcattgctgtaagtagcttgtcacttgccaaagtaccagtgattttcttatgtcaatttggtgcttctgacaaaatctctttgtaggctcatttatctctagggactaggttcaattttcggaaatacatcaaaaggtcactggaggacgattttaagacagttgttggcattaggtaaggaagccttgaaatctggcatttttagttgtatacctttgttgttcctttttaagagtactgttgcaattgacaaaaagaaaacaatcatttctttggacccttttattcattagttacaaaatgtggggttgtctttaaacatttaagtgagctttgttcattatccattgtccattgttctatatcaactcagagttagctacatttagataagttgtgcataaacgaatggaaatagcagcagttacaatttaggatgtttcattcccacagaaaaagtgcaagcactttcttgatgtaatttcctacagattgcagattggaagttgtctctgactgtgccattatcttattgaattgcaatatcttgtcttcttgttctctttattatccatgctctgtcttcctaataagtaattaccgattaacttgttttatcaacctttacattgccagtgcacccttatgggcttctgcgttggccattatgctcttcaatgttcatggtgagttacaatcctattttttttaccatcaacttcctaaaatctacgttgtggtcaaataatcttttgtatttcacatagtttgcctctactgaaggaatgctatttgcattgagttgaacacttaaaaaagtttagctccttgttggagttcagatgcaatggatatagttcagaagaaacaagatactctgatggaaatgatgttaacttcctatttattttacatatttctccaggatggcataacttgttctggttctctacaatcccccttgtagtaagtgctcagcttggtacctactaggctagtacatattatggttctcattatggtcacatatctcttatgactggtaccaacagtttgtcctaaatgtaggtaactttagcagttggaacaaagctgcaggctataattgcaatgatggctgttgaaattaaagagaggcatacagtaattcaaggaatgccggtggtgaaactcagtgatgaacatttttggttcgggaagccacgtctggttcttcatcttatccatttcgcgtcatttcaggtaacttgaacataaagcttgcggaaaagcttttgcgtaaaatgcacaaccttgactcacttacatccaccaaatgatgaatgtcatgcaccatagacatctggatagcagtgtcaaattgaattttcactatcatgattgctaaggaaataaagtatcagtgtttagagaatactttgttgccacggaatacttaatctctagtctttagcatgcacttacttttgaatctgaagccacaaggctgcgaaaataggagtgtatttttccttcatctaatagctcttcattgttcttgcagaatgcatttgaaattacatacttcttttggatttgggtaaagattgtctccatttcaaaatttgaaaaactgttttacggcacagctataatttctctgatgatgctgaacttttgtgcagtacgaattcgggttgagatcctgcttccatgacaactttgagcttatcatcgccagagtctgccttgggtaattttcatactttgtcttacttttctcacaattttctactgaatgctaataaattaatattttttccaacccatgtctacagggttgtcgttcaattcatgtgcagctatatcacacttccactctatgctctcgtatctcaggtaactattcacatcatctgacaaagttcagtaacacacctcactttcagctaacatttcagagaagatattgagctgcacttgctatcaatcaacctaagatctctctcttttttttctttttatcctgccgacgactaaccggagaaggattgattgttctccagatgggttcacagatgaagagaacgattttcgacgagcagacggcgaaggccctgaagaaatggcacaaggcagcagtggtgaagaagaagcagcagaaggggtcatcccatgagccaggttcagagacaccgggcacggagacgacgacgacgacggcgacggcaacggaggagagccagcgagaacgcgacgccgcggccatgccggtgcgccacctccaccgctacaagaccatcgcccacgtcggcgcgacggggacgctgtccgactcggactgctccgacacggacacgccgttcgcgtcgccgacgaggctcctgataccgccgacaaagcagcggagcctcgacgccgggagggcggaggtgcgcgtggacgtcgactcgacgccgacgccgacaccaccggagcgccatgacagcttctccttcccgaggttgcctgctcacaatttgcagcagaaatgaccaaatgatcatccatcctaagttcctaaccatcagtagtagtagtagcagcatcaactatacatgtaattgaaattgatggtggtgacaagtgtgtgtagagcagtggagtctgaaacttggtgctgtcccatttggtccagctcctactctgtgggtggagcggagctgagaaaatgccatttcacgtacttcctccgtttcacaatgtaagtaattgtaacatttctcacatttaaattgatgttaatgaatctatatagatatatatgtctagattcattaacatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggatgaagtataatttccggtttggcagctgtttggcagctccactctaatactttatgttatccatgattttgaaagtgtttggtacagagccacagatataagaatatccgagcatgagttatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0541000, RefSeq:Os10g0541000