BGIOSGA029659

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Revision as of 09:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029659| Description = cDNA clone:J023050H06, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA029659, complete gene.|...")
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Gene Name

BGIOSGA029659

Description

cDNA clone:J023050H06, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA029659, complete gene.

LocusTag

OS09G0448100

Ensembl Transcript ID

BGIOSGA029659-TA

Ensembl Protein ID

BGIOSGA029659-PA

Length

3556

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15325271..15328826

Sequence Coding Region

15328655..15328826,15325271..15326478

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15325271..15328826 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15325271..15328826 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGACGGCGGCGAGTTGTGCACTCGTGCCCGGAGAGGACGGTCCCGGTGCGGCGGACGACGAGGCGCGACGTGCTGAGGTCAAGCTCCGCCATCCGGTTCGGGATGAAGCAGCCATGCGCCGCCGGCATCGTCCGCCGCGACTCCACCAGCGACGGCCACGAGGTCAATCAGCTTGAGAGATTGTTGTCATGGCAGCGAAACAATCTGGTGACTACTCGGCCGCGAAAGGTGATGCGCATTGTTATCAACTCTTGGTCGAGGTTCATGCCCCCTTACATCCCTGATGATGTGATGTTCAACATCCTGTCATGGCTGCCATCCAAGTCTCTCATCCGATTTAAGTCTGTGTGCAAGGCTTGGCATGCCATGATATCCAGCCCGTGTTTCACTGATGCTCACCTTGAGTGTTCCAAGCGAAACCCATCGATACTCATGGTCCCTGGTGCTTATGAGAAGCAGGAGGACGGTGAGAATATTGCCTTCATGATGGTCCTCTATAAGTACCATGGAGGTAAAACAATGGAACTGGTCCATATGCAGAACTTTCCGCTAGGCATTGGTGTATGGACTCGCCCTGTGCACTGTAATGGTTTACTCCTCATTCCCACCATGAACCTCGAAATGATGATCTGTAACCCTTCAACAAGACAGATTGTTTTCCTACCAAAAGTCAGTGGCAACATTTGCACAGGCACAAGGGCTGGATTTGGGTTTGATCCTCACAGCAACAAATACAAGGTGGCTAGATCTTCCTATCAAAGGGATAGTGAGACACAAGAATTAGTCTGCAAGTTTGAAGTGCTTACTCTGGGCACTAATGCATGGAGGCAAACTGAAGATCCACCATATCCAATTGATGCTTTAACTCCAGTCCATGTGAAAGGCGCCATCTACTGGATAGTGTGTAGTTCACTTTGCCCAGATCCACCTAATGCATTCCTCCGATTCTGTTTGACTGATGAGAAGTTCAGTTTGTTTCCGTGCCCTCCATCCAATGTAAAGTCTGTCCGTTTCACAGAGGTGGAGGGTGAACTGTGTTGTGCTTGCTTTTTCAGTGAGACGCTAGCGCTGGAGATTTGGAACTGCAGTGGTGGGCAGAACCTTGAATGGACTCGACGCTATGTTATACAGATTCCACCTGATGTTGTTATGAAGTACCCTGTAGAAAGACCCCCTTTAATTGTTTTTCGTGAAAAAATGTTGCTGCTGGCATTCAAAAAGGTCTACAGGTATGATATCGAAACCTGTACAATAGTAGAATTAGCTTCAAAGGTTTCAGACTTCACCTGCTATGAACCATATTTGGAGAAGGAAGCAAGGGATTTGCATCTATTTAATTATGCTGAGAGTCTAGTTCCAATTAGAGAATTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDGRRRVVHSCPERTVPVRRTTRRDVLRSSSAIRFGMKQPCAAGIVRRDSTSDGHEVNQLERLLSWQRNNLVTTRPRKVMRIVINSWSRFMPPYIPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMVPGAYEKQEDGENIAFMMVLYKYHGGKTMELVHMQNFPLGIGVWTRPVHCNGLLLIPTMNLEMMICNPSTRQIVFLPKVSGNICTGTRAGFGFDPHSNKYKVARSSYQRDSETQELVCKFEVLTLGTNAWRQTEDPPYPIDALTPVHVKGAIYWIVCSSLCPDPPNAFLRFCLTDEKFSLFPCPPSNVKSVRFTEVEGELCCACFFSETLALEIWNCSGGQNLEWTRRYVIQIPPDVVMKYPVERPPLIVFREKMLLLAFKKVYRYDIETCTIVELASKVSDFTCYEPYLEKEARDLHLFNYAESLVPIREF</aaseq>

Gene Sequence

<dnaseqindica>1..172#2349..3556#ATGGACGGACGGCGGCGAGTTGTGCACTCGTGCCCGGAGAGGACGGTCCCGGTGCGGCGGACGACGAGGCGCGACGTGCTGAGGTCAAGCTCCGCCATCCGGTTCGGGATGAAGCAGCCATGCGCCGCCGGCATCGTCCGCCGCGACTCCACCAGCGACGGCCACGAGGTCAGTCAGTCAACTCGCCGGTCTGAATAAGTTACTACATGCTGAAATGATCGAGTAGGAGTATAGTATACGTTGTGCTGCACAGCTGGTGCAGTAGCAATGGGCAATGGCAACAATGGCGATGGCGAGTTGGCAACGAACTGAATTAAGAGTGTAATTAATTAGCTGAGATTATTCATGAGCTGATGAAAACGATGATGCAGCATGCGATGGGGTACGTGATGGGGGATCAGTTCTGTTGGAATTAATGAATGGGCCTTAGCCCACTCGAAGATTAATTCTTTGGAAAATCACAAAAGCCCACCTCATGGGATGGCATGCATGTGGAGTTTAGTACCACCTTGCTTATTCTAGGAGAGGGGGACCTCCTTAAAAGGGAGGATGCCCTCCTAGCCACTTGAAGCATGTGTGGTGGAGAGAAGAGGGGAAACACGCGCGCTCGCTCGCCTGGCCGGGCAGGCGGCGCGCGTGCACGACGTACGCGTCGAATGGTCCGAAAAATTGGCTCCTCACCCTTGCGCAGATGCAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTATTTTGGAAACGTTCCGAAAAATCCGGTGCGTGCAAACGGCGTGGAGTCCGGATAAGTTACGCGCGACTTATCCGGTTCGGTTACGCGCAGTAGAGATCGTGCGGGCGCCCTGATCAAGCGATCCTTCTCTATATAAACCGACCTGCCGTCTTCACGCAACATATGCGAAATCAATCTAGGGTTTGCCTCCTACTCTGTACTGCGCCATCGCTCGTAGACTTCTCCATCCCGCTCACCGGCGTGCACCGGCGATTGGGAGAGCAGGTCTCCGGAACCTCTGCCTTCGACGTCCTGCACCGGGAGAAGGCGGCAATAAGGTTTTTGGGAAGCGCTTCGCGCGACTGCTCCCTGTTTGTTCGCGACGGCTCGTCTTCCTCTTCGCTCGCGTGTTTCGTGCCTTCGTAGACACCTGAGAAAAGTTTCGACCAACCAGCCGGTCTTTCCGTCACCTCGGTACGTGTTCAATATGTTGCGCATATTTGATCTGTTCATGTTATACTGTGTAGTTTACATGTATAGATCTAATGATGCGTTCATGCTAGTTTTCTTCTGTAATGTCATGATTTATTTATGGAATAGATTAAATCATTATATGTCTATAATCTCAGCAAGTTCTACAGGGTGAAGGCGAGCCTGAACGTGTGGTCGGCGAGGGTGGCGACAGCGGCGGAGTTCAGTCTCTGGCTCCTTCGGCAACGACCTCAACACAGACGTGGGCGACGACGAGTTTCACGGCGATGAGCTGACTCGGGAAGCTGGGGCAGGGCGGGCTAGGGGGAAACCCGCGGGCGTCGGCGGCTTTGGCGGCGCTGGCGAGGTGGCCTTCGACCGTGTCTGTCGCCGCCCTCCTCTCGCCGGCCGAAGCCTGCCGGCCTCTGCACCTGCAGCCGCCCGCCGAAGACTGCGTGCCGACGCACCTGCAGCCGGCCGCCGTCGCGCTGCCGCCCTCCTCTCGCCCGCCTCACCTGCCGGCCTCTGCACCGCCGCTTTGCCTCGCCCATAAAGAGCGAGGAGAAAGAGGGAAGGTGATGATGTGAATCACGCTGACATGTGGAGCCCACGTGGGTCCCATGCTGACTCAGCCACCACATAGGACAAACCGACGTCAAACCATCGAAAAATCTATTATGACTGCTTTTGTATAGTTAATGGACCTCGTATATCTGTTTTTATATAGTTCGAGGATGTCTTCTATCCCCCTGACAAGTTGAGGGACCTTCGGTGTACCTTTTCCTTTCTCCTCCTCTCGAGAATCCCCAAATCTCGCTCGCTATTCACGCGACCACGCAAACCGACCTTCCTCCGTCGCTCGGCCAGCGGCCGGCGCCGGCGCGCGGGGTCCACCTGAGGCGGNCATACCCTTCCCAGGCTCTCAAGCCAGGAATCCGCTCGCCGTGCGACTTAGGCGGAGTTACGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGATTGCATGGCCAATACTTCCTTTATAAGTGGGGAAAAGCTCTCCCCTCGGTGACCAGACTATATGTAGATATATTTAATAACTCCTTTTTAAGTGCAAAGTCATAACCTATCTCCTCGTCATCTTCTGCAGATCAGCTTGAGAGATTGTTGTCATGGCAGCGAAACAATCTGGTGACTACTCGGCCGCGAAAGGTGATGCGCATTGTTATCAACTCTTGGTCGAGGTTCATGCCCCCTTACATCCCTGATGATGTGATGTTCAACATCCTGTCATGGCTGCCATCCAAGTCTCTCATCCGATTTAAGTCTGTGTGCAAGGCTTGGCATGCCATGATATCCAGCCCGTGTTTCACTGATGCTCACCTTGAGTGTTCCAAGCGAAACCCATCGATACTCATGGTCCCTGGTGCTTATGAGAAGCAGGAGGACGGTGAGAATATTGCCTTCATGATGGTCCTCTATAAGTACCATGGAGGTAAAACAATGGAACTGGTCCATATGCAGAACTTTCCGCTAGGCATTGGTGTATGGACTCGCCCTGTGCACTGTAATGGTTTACTCCTCATTCCCACCATGAACCTCGAAATGATGATCTGTAACCCTTCAACAAGACAGATTGTTTTCCTACCAAAAGTCAGTGGCAACATTTGCACAGGCACAAGGGCTGGATTTGGGTTTGATCCTCACAGCAACAAATACAAGGTGGCTAGATCTTCCTATCAAAGGGATAGTGAGACACAAGAATTAGTCTGCAAGTTTGAAGTGCTTACTCTGGGCACTAATGCATGGAGGCAAACTGAAGATCCACCATATCCAATTGATGCTTTAACTCCAGTCCATGTGAAAGGCGCCATCTACTGGATAGTGTGTAGTTCACTTTGCCCAGATCCACCTAATGCATTCCTCCGATTCTGTTTGACTGATGAGAAGTTCAGTTTGTTTCCGTGCCCTCCATCCAATGTAAAGTCTGTCCGTTTCACAGAGGTGGAGGGTGAACTGTGTTGTGCTTGCTTTTTCAGTGAGACGCTAGCGCTGGAGATTTGGAACTGCAGTGGTGGGCAGAACCTTGAATGGACTCGACGCTATGTTATACAGATTCCACCTGATGTTGTTATGAAGTACCCTGTAGAAAGACCCCCTTTAATTGTTTTTCGTGAAAAAATGTTGCTGCTGGCATTCAAAAAGGTCTACAGGTATGATATCGAAACCTGTACAATAGTAGAATTAGCTTCAAAGGTTTCAGACTTCACCTGCTATGAACCATATTTGGAGAAGGAAGCAAGGGATTTGCATCTATTTAATTATGCTGAGAGTCTAGTTCCAATTAGAGAATTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029659