Os10g0541200

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Revision as of 08:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0541200| Description = Similar to DNA-binding protein phosphatase 2C| Version = NM_001189325.1 GI:297727780 GeneID:9268727| Length = 3737 b...")
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Gene Name

Os10g0541200

Description

Similar to DNA-binding protein phosphatase 2C

Version

NM_001189325.1 GI:297727780 GeneID:9268727

Length

3737 bp

Definition

Oryza sativa Japonica Group Os10g0541200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21581636..21585372

Sequence Coding Region

21584507..21585094

Expression

GEO Profiles:Os10g0541200

Genome Context

<gbrowseImage1> name=NC_008403:21581636..21585372 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21581636..21585372 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaatatacctcatttgaatggcaggacattgctcgttgcaaatgcaggagactgtcgagcggtattagggaagagaggccgagctgttgagttgtcaagagaccataaacccagctgcagaagcgaaaagatcagaatcgagaaccttggtggtactgtctttgatggctatctcaatggtcagctgtctgtagcaagggcgattggtgattggcacgtgaaaggttccaaagggtccataagccctctcactgcagagccagagtttcaggaggttagactcaccgaagaagatgagttcttaataatcggctgtgacgggctttgggatgtgatgaccagccagtgcgctgtcacaatggtaaggaaagagctgatgacacacaacgatccggaaagatgctcgcaagagctagttcaagaggctctgcgacggaactcatgcgacaacctaactgtagtggttgtgtgcttctcatcagacccaccacctcagatcgaggtcccaagatttcgagtacgaagaagcatttcgatggaaggattgcatatgttaaagggagctcttgacagtaatgcctga</cdnaseq>

Protein Sequence

<aaseq>MVNIPHLNGRTLLVANAGDCRAVLGKRGRAVELSRDHKPSCRSE KIRIENLGGTVFDGYLNGQLSVARAIGDWHVKGSKGSISPLTAEPEFQEVRLTEEDEF LIIGCDGLWDVMTSQCAVTMVRKELMTHNDPERCSQELVQEALRRNSCDNLTVVVVCF SSDPPPQIEVPRFRVRRSISMEGLHMLKGALDSNA</aaseq>

Gene Sequence

<dnaseqindica>2872..3459#atcaaatccacgagctttctctctctctctctctctctctctctctctcctcctcctcctctccttctccttcccatcgccaccagcttctccggccgtccgccatcgctgctgaccgcagcatccgcagccacagcttctccgacgccggcgacggccgtttcccccccggaggtgagcgctagctgcttcccgttgttcatccggcctctctgatctgattctgatcttgcgttctttgggttggattcctgattgctgtttgggggaaaaataaataaataaataaggggatcttttctggtttcgtagtgggggcattcttggctttgtattcgaacgcgggagctgcgaaatggcgtggttcttggtgatttggaaacggatttcatttcatttcttttcttttctttcctgttattgatgcgattgatgtttctatttctcgctcgatttcgtctcggtacggctcgaatgatgaccaatcgaaaaagtactgtttctgtgttcccaaaaaaaaagaaattataacgatttttttgctgatcgttcttctgtttacagggccaatgaaaaagctgcatcttctttttctttttttctcctctttaaaatggtttcgtttccgagcagaatacgaatacggaagagtgtgaatcatgagcggaggcgtcgagccggagaccccgccgggtagcagcagcggcggaagcacgccggtgggcggcaagccgccgcgccaccacctcacgtccatccgccactgcgccagcagcgctcgcatcgccgccgcaaccgcagaattcgtaatcatcctcgctacctacctatcgccctgtccagagaatttggctcccaatattgtgtttctgacattttctttcgttgctttgtttgcaggacctgggtgcggggacgctgagcttgatctcgcccacggacattcgccctggcttcctgccggtgttccgttccgggagctgcgccgatatcggtaccaaatcgtacatggaggacgagcatgtgtgcgtcgataacctcatcgagcacctgggagtgcgtacacctgtgatccctgcaccgggtgccttctacggggtgagttggtttgcatttgcatcaaagttttggaggcttgctgttcagtattcagcaatatatgtgctcattatggaccaatgatttattccgttgccagtggtaatattgttgccatgatagtttcttggtgtgctcatttggtcgtacacatcatggtgcaaataattgcatattagtgtggttgatgatgatgtactcgtggtgggaatgattgcatcaggcgaatcagctcattatgagcatttataattcctcttaaattttcttattaggttgtgcaaatgtgcaatagcctttgtgacccccaaaaatgttaactaatcagcatataatttcttttcatggaacactaaaatattatcggtaaacggtagactgtcaagcatagtagagtgggcaagatgttgaattttaatatgctaaactatgcattgtatataaaaggagcatgcatgttgttatttgagattttcagttaactatttttcattctgtacgggagttttcacagcagatgtttaataggttcaactttttgggggtaatttacaggtgtttgatggtcatggtggtacggacgctgcttgttttgttcggaagaacttactgaggttcataattgaggatggtcacttccccagcagcatagagaaggcaatcaggagtgcatttgtgagggctgatcatgcaattgcggattcccattctcttgaccgcaattctgggactacagcattgacagcacttatttttggcaggtaaattctaacgccagtatctcaaatgtttattccagtggtacaatgcactattgagtcattaatcgatgctactttaatgcgaaaagtttctcaagtctgtactgaaattttccattcatgacatcatattgtaatccagtagcctctgctagttagtatccaaaccactagtggcagagaaatgagtattagcatttaaagtcaagctgactcaattatgaggtgtttctgcaacttcaattagttattagatactattttagctgatttgtgaatggaaataattttttatccatcggctatttcacatttttttagagaacaaatcatatattaacccggctttgcaataaagcccaacataacaaggttcgacaattttagctgatttgtgaatggaaataactcctttctcatttttcatccatcggctagttcacttttttttagagaacagatcatatattgacccagctttgcaagaaagctaacataacaaacagaccatatattgacctggctttgcaagaaagccaacataacaaggtttaaaaaaaagcgatatcgcccaccgtggggcttgaacccacaaccacaaggttaagagccttgcgctctaccgactgagctagacgggcttttggctgttacattttctttacagaacataccatatattgacccgactgaactagacgggcttttggttatttcatattttctttagagaacataccatatattgacctgactttgcaagaaagctcaacataacaaggtttaacaaaaaagcaatatcgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccgactgagctagacgggcttttggctgtttcacatttattgcttcattgtccaatatcacaacaaagcgcaaagttctttcctgctccttaataagttggttgtgttgccttagttgcttgacaatctttagatcaattatatcattttgcatattatggtgaatatacctcatttgaatggcaggacattgctcgttgcaaatgcaggagactgtcgagcggtattagggaagagaggccgagctgttgagttgtcaagagaccataaacccagctgcagaagcgaaaagatcagaatcgagaaccttggtggtactgtctttgatggctatctcaatggtcagctgtctgtagcaagggcgattggtgattggcacgtgaaaggttccaaagggtccataagccctctcactgcagagccagagtttcaggaggttagactcaccgaagaagatgagttcttaataatcggctgtgacgggctttgggatgtgatgaccagccagtgcgctgtcacaatggtaaggaaagagctgatgacacacaacgatccggaaagatgctcgcaagagctagttcaagaggctctgcgacggaactcatgcgacaacctaactgtagtggttgtgtgcttctcatcagacccaccacctcagatcgaggtcccaagatttcgagtacgaagaagcatttcgatggaaggattgcatatgttaaagggagctcttgacagtaatgcctgagttctcaaaacctgccttctctggtaactttggttgtatgatcttgtttttctgttgggtccttgaaagttttgctctgttctttcagctataggttcgaaataagttgtgtagaattactgaaattttgttgaggtgtaggctaatcattttgtgaggcgatgatttatctgtaccggcgccagcatttggttgttcacaatgtaattgaccaataccagcattcatattctggtacaagtgccagttataatagttgatcagttttgttctacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0541200, RefSeq:Os10g0541200