BGIOSGA029677

From RiceWiki
Revision as of 09:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029677| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029677, complete gene.| tag = P0046G1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029677

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029677, complete gene.

LocusTag

P0046G12.33

Ensembl Transcript ID

BGIOSGA029677-TA

Ensembl Protein ID

BGIOSGA029677-PA

Length

2298

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15001976..15004273

Sequence Coding Region

15001976..15004273

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15001976..15004273 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15001976..15004273 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGGATTTGTTCCCCTGGGGAATGTCACCCAGGTTGCGAAGCAATTCGCCGCGAGCTCTGTTGGGCAACTTGCCCGGATCGAGGGGCTGGTCACACTGAGCTGCCTCCTCGTCGTCATCCTCGTCTTCTCCAACTCCCGTCGGCGCCATCAGAGCAACGGCTTCCTGGGCTTCCTCGTGTGGGCGGCCTTCATGTTCAACTACCCGGTGATCTCCTACACCATCGGCCTCATGCAGTCATCGTCCGTCCGCAACGAGCTCTTCGTTGTCTGGGCCTGCTTCCTCCTCCTCCTCCTCGGCAGCGCCGACGCGATGACGGCCTTCAGCTTCAACGACACCCAGCAACACGCCAGGTCGATGATGAACCAAGCACTCCACATCATCTACCTGCTCTTTCTCATCCTGTACTACAAGGCCCAGCTTAGGATGAACCTCAAGGTCCCCCTGTTCATCCTCTGGAGCTTGAGCGTCGCGCGGTTGGTTCTGAGGATCAACGCGTACCGCACGACGAGCCGAGATAACGGGCTGATCAGGGAGAACCAGATCGTGTTCGAGTACATGAAACACAAGCTGTTAGATGGCTCCATCGTCGGTAAGTACGATCCCGACCCGTCCAGTATGAAGGAGTACATCTACCTCGTCGATGGGAAGGAAGAGGAGTCGTCGTCGATGGCGATACACTTGCGGTACGATGCGCCTGACACGGTGAGCGTTGATAAGGTGTGGGAGTGCAAGGGCGAGCTGCTAAGCTGCAGCTCATCTGCAGGGAGCCGCGGCGCGGCGAGGCGGCGAGACTTGTGCCTCTCTTTTGCGCTCTTCAGGCTGCTGCGCCTGAGGTTCGGGGCAGACCACGTTGGTGATCTCAACTTCCATTCTAATAACGACCTATCAAGAACTCTTGTCGTCGATAGGCTCCTCTCGGATGATCGCGATCTTGACAGAGCCTTTCGGGTGGTTGAGGCTGAGCTGGGCTTCCTGTTTGATTTCTTCTATGCTCGGTATCCTTCCTTGAAAGATAATCTCGTTTTCGATTTGATCCTTTATTTGCTCACCATGGTTACCAGCCTTTTCACCCTCTTCTCTTCCGTTCTTCTTCACTACCGACCCAGTACTACAGCCAAAGTAAACATCATCATCCATAGCTTCAACCTTGATCTTTTTGTTACTCGTCTGGTCGTTGCCCTCTACATCTTTTTAGAGTCATACCAGCTTCTTTCGTTGGTGTTGTCCGATTGGCACAAGGTTAAATTGATGTGTCAGTACGTGCTAAAAGTGTCATGGCACCGTGCAAGGGTCGACACTCCGTTGAAGGTGCTGTGCCATTTCAACGTCTCCAGATACTGGAAGAATGCCATTAATCAGTACTCCCTGCTTGATAATGCTGGTTATCTATACCGTGTGCAACTCTTGCTATCAACTCTGACACTTCAGTTGCTTGACCCGTGGATTATGGCGTCATCCATCGTCTTGCCACCGCAAGTGAAGCAAGCCGTCCTGTGCGCCCTCAAGGACGCCCTGAAACCTACCAATGGCAAAATTACCGATGGAAGAAGGTGGCTACACCAGAATGGCATTTTGGACCGAGACCTGGATTACGACCTCTTTAGCCATAAAACATACGCCCCCTACATTTTGGTATGGCACATAGCCACAAGCATCTGCTGCTATGGGGAGTCCAAGTTTGACATGGCGCAGGCTGATGCAGAGTTGAGGTATCACTACGAAGTAGCCACAGTGCTCTCGGGATACTGCTCCTACCTCGTAGCTTTCGCACCGGATCTCATACCAAATGGGACTTACACAAGCCAGCTACTGTCTTGCCGTGTGCTAAAGGATGCACACGCATACCTCGCAGAATGCAGGACAACCAGTGACAAGTATGACAAGTTGATGAAGCTGGGTCGCGATGGTTGGAAGGAGCAAGAAGCAGGATGCCCTCTGCTGTACGAGGGAGCGGTGCTCGCGCTCAATCTTGTGGACCGAAAGAAGGATGCGGAGGAGAGGTGGAAGGTGCTCGCCCATTTCTGGGCAAACCTGTTGCTGTACATCGCGCCGTCTGATCGAGCGTCTGCGCACGCCTCCAAGCTGGCGACCGGCGGCGAGCTTTTGACCATCGTCTGGGCTTTGCTGAATCATGCCGGAGTTATCAACAAGCTTCAGGAGAATAACGGCTGCCAGCCATTGGATACGCTGCCAAGGGCGCCGAGGACTCCAATTTTTCATCGGCAAGGAACGATAGTTGATTCCAATGAAGACGATGGAGATGAGATCATGCAAGAAGACTATTCTGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDGFVPLGNVTQVAKQFAASSVGQLARIEGLVTLSCLLVVILVFSNSRRRHQSNGFLGFLVWAAFMFNYPVISYTIGLMQSSSVRNELFVVWACFLLLLLGSADAMTAFSFNDTQQHARSMMNQALHIIYLLFLILYYKAQLRMNLKVPLFILWSLSVARLVLRINAYRTTSRDNGLIRENQIVFEYMKHKLLDGSIVGKYDPDPSSMKEYIYLVDGKEEESSSMAIHLRYDAPDTVSVDKVWECKGELLSCSSSAGSRGAARRRDLCLSFALFRLLRLRFGADHVGDLNFHSNNDLSRTLVVDRLLSDDRDLDRAFRVVEAELGFLFDFFYARYPSLKDNLVFDLILYLLTMVTSLFTLFSSVLLHYRPSTTAKVNIIIHSFNLDLFVTRLVVALYIFLESYQLLSLVLSDWHKVKLMCQYVLKVSWHRARVDTPLKVLCHFNVSRYWKNAINQYSLLDNAGYLYRVQLLLSTLTLQLLDPWIMASSIVLPPQVKQAVLCALKDALKPTNGKITDGRRWLHQNGILDRDLDYDLFSHKTYAPYILVWHIATSICCYGESKFDMAQADAELRYHYEVATVLSGYCSYLVAFAPDLIPNGTYTSQLLSCRVLKDAHAYLAECRTTSDKYDKLMKLGRDGWKEQEAGCPLLYEGAVLALNLVDRKKDAEERWKVLAHFWANLLLYIAPSDRASAHASKLATGGELLTIVWALLNHAGVINKLQENNGCQPLDTLPRAPRTPIFHRQGTIVDSNEDDGDEIMQEDYSV</aaseq>

Gene Sequence

<dnaseqindica>1..2298#ATGGATGGATTTGTTCCCCTGGGGAATGTCACCCAGGTTGCGAAGCAATTCGCCGCGAGCTCTGTTGGGCAACTTGCCCGGATCGAGGGGCTGGTCACACTGAGCTGCCTCCTCGTCGTCATCCTCGTCTTCTCCAACTCCCGTCGGCGCCATCAGAGCAACGGCTTCCTGGGCTTCCTCGTGTGGGCGGCCTTCATGTTCAACTACCCGGTGATCTCCTACACCATCGGCCTCATGCAGTCATCGTCCGTCCGCAACGAGCTCTTCGTTGTCTGGGCCTGCTTCCTCCTCCTCCTCCTCGGCAGCGCCGACGCGATGACGGCCTTCAGCTTCAACGACACCCAGCAACACGCCAGGTCGATGATGAACCAAGCACTCCACATCATCTACCTGCTCTTTCTCATCCTGTACTACAAGGCCCAGCTTAGGATGAACCTCAAGGTCCCCCTGTTCATCCTCTGGAGCTTGAGCGTCGCGCGGTTGGTTCTGAGGATCAACGCGTACCGCACGACGAGCCGAGATAACGGGCTGATCAGGGAGAACCAGATCGTGTTCGAGTACATGAAACACAAGCTGTTAGATGGCTCCATCGTCGGTAAGTACGATCCCGACCCGTCCAGTATGAAGGAGTACATCTACCTCGTCGATGGGAAGGAAGAGGAGTCGTCGTCGATGGCGATACACTTGCGGTACGATGCGCCTGACACGGTGAGCGTTGATAAGGTGTGGGAGTGCAAGGGCGAGCTGCTAAGCTGCAGCTCATCTGCAGGGAGCCGCGGCGCGGCGAGGCGGCGAGACTTGTGCCTCTCTTTTGCGCTCTTCAGGCTGCTGCGCCTGAGGTTCGGGGCAGACCACGTTGGTGATCTCAACTTCCATTCTAATAACGACCTATCAAGAACTCTTGTCGTCGATAGGCTCCTCTCGGATGATCGCGATCTTGACAGAGCCTTTCGGGTGGTTGAGGCTGAGCTGGGCTTCCTGTTTGATTTCTTCTATGCTCGGTATCCTTCCTTGAAAGATAATCTCGTTTTCGATTTGATCCTTTATTTGCTCACCATGGTTACCAGCCTTTTCACCCTCTTCTCTTCCGTTCTTCTTCACTACCGACCCAGTACTACAGCCAAAGTAAACATCATCATCCATAGCTTCAACCTTGATCTTTTTGTTACTCGTCTGGTCGTTGCCCTCTACATCTTTTTAGAGTCATACCAGCTTCTTTCGTTGGTGTTGTCCGATTGGCACAAGGTTAAATTGATGTGTCAGTACGTGCTAAAAGTGTCATGGCACCGTGCAAGGGTCGACACTCCGTTGAAGGTGCTGTGCCATTTCAACGTCTCCAGATACTGGAAGAATGCCATTAATCAGTACTCCCTGCTTGATAATGCTGGTTATCTATACCGTGTGCAACTCTTGCTATCAACTCTGACACTTCAGTTGCTTGACCCGTGGATTATGGCGTCATCCATCGTCTTGCCACCGCAAGTGAAGCAAGCCGTCCTGTGCGCCCTCAAGGACGCCCTGAAACCTACCAATGGCAAAATTACCGATGGAAGAAGGTGGCTACACCAGAATGGCATTTTGGACCGAGACCTGGATTACGACCTCTTTAGCCATAAAACATACGCCCCCTACATTTTGGTATGGCACATAGCCACAAGCATCTGCTGCTATGGGGAGTCCAAGTTTGACATGGCGCAGGCTGATGCAGAGTTGAGGTATCACTACGAAGTAGCCACAGTGCTCTCGGGATACTGCTCCTACCTCGTAGCTTTCGCACCGGATCTCATACCAAATGGGACTTACACAAGCCAGCTACTGTCTTGCCGTGTGCTAAAGGATGCACACGCATACCTCGCAGAATGCAGGACAACCAGTGACAAGTATGACAAGTTGATGAAGCTGGGTCGCGATGGTTGGAAGGAGCAAGAAGCAGGATGCCCTCTGCTGTACGAGGGAGCGGTGCTCGCGCTCAATCTTGTGGACCGAAAGAAGGATGCGGAGGAGAGGTGGAAGGTGCTCGCCCATTTCTGGGCAAACCTGTTGCTGTACATCGCGCCGTCTGATCGAGCGTCTGCGCACGCCTCCAAGCTGGCGACCGGCGGCGAGCTTTTGACCATCGTCTGGGCTTTGCTGAATCATGCCGGAGTTATCAACAAGCTTCAGGAGAATAACGGCTGCCAGCCATTGGATACGCTGCCAAGGGCGCCGAGGACTCCAATTTTTCATCGGCAAGGAACGATAGTTGATTCCAATGAAGACGATGGAGATGAGATCATGCAAGAAGACTATTCTGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029677