BGIOSGA029696

From RiceWiki
Revision as of 09:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029696| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029696, complete gene.| tag = OJ1328_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029696

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029696, complete gene.

LocusTag

OJ1328_D07.4

Ensembl Transcript ID

BGIOSGA029696-TA

Ensembl Protein ID

BGIOSGA029696-PA

Length

4453

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14583927..14588379

Sequence Coding Region

14588076..14588379,14587929..14587964,14587686..14587811,14587477..14587601,14587096..14587386
,14586331..14586461,14585586..14585703,14584822..14584908,14584278..14584367
,14584108..14584193,14583927..14584002

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14583927..14588379 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14583927..14588379 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGACCAATGAGATCTCTGGCAGCAATGAGTTGTGTGCTCAAGATCCAGAGGACATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAGTGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAACTGAGATCATTAACCAACCTCCAGATTATCGTGGAGAATGGGATCCATATGTATCGGATGATGAGTTTGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTACAAGTTTAATTAGATGTATGGACAAAGACGAGCAAGCTGATGAACTTAAGATTAATGTATGGTTACCGAGTGGTGAAAAACGTGAGGGTTTTATTTCAAATGTGGATCTGTACTACAACATTTGTCTGGTTACAGTTCACTGTACTTCTAACCTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCAAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTCGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAATCTTCACAAAGAGCCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTAGAACCTTCAGCAGAACATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATAGCTTTTTCCAATGCTGCAGAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAGAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTTTTCTCCGAAGATTGGTACAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MSTNEISGSNELCAQDPEDMTFYNLRGSDKTTILRKKELQRLRKERIENKCFRKKEKIRKAKEIVDSALKIREELHQKYLRAEPWLKEQERQRLERNKRFTTEIINQPPDYRGEWDPYVSDDEFGTSFELKRTGWEVEKFALDLARSTVGLESFTGENHLFSCSGTIIEFLNGICSVVTSTSLIRCMDKDEQADELKINVWLPSGEKREGFISNVDLYYNICLVTVHCTSNLPKKSFNDDTGFFDLYGNHSKDVVALGRSCEPWSLKVASGKLIPRRHRFDCEELLVSSCKITKIGVGGPLMDFNGNIVGMNFYDKKETPFLPSFIVLKCLQHFKEFGKVVRPLHGLRVGNLHKEPLASLEKICHEFPKVCGVIVEKVEPSAEHSEIKVGDIITHLDGIAFSNAAEFGGILLDRCVTQMLEEQNLSEDCNQMISLKFSVKTRGGISEATTRTINTDKFTPSGLNRWPLPRPIIVRQYARGVLFSEDWYS</aaseq>

Gene Sequence

<dnaseqindica>1..304#416..451#569..694#779..903#994..1284#1919..2049#2677..2794#3472..3558#4013..4102#4187..4272#4378..4453#ATGTCGACCAATGAGATCTCTGGCAGCAATGAGTTGTGTGCTCAAGATCCAGAGGACATGACTTTCTATAATCTTCGCGGTTCTGATAAAACCACAATCCTGAGGAAGAAAGAACTGCAGAGGCTGAGAAAGGAACGCATCGAAAACAAGTGCTTTAGAAAGAAAGAGAAGATAAGGAAAGCTAAGGAAATTGTGGACAGTGCCCTCAAGATAAGAGAAGAACTGCATCAAAAGTATCTCAGAGCCGAGCCATGGTTAAAAGAACAGGAAAGACAACGACTTGAAAGGAACAAACGTTTTACAAGTAAGAATTTTACTCTAACCCTTGCCTCCTCAAGTTACTCTTACTGTCATCTAAAAGGCTGCGCTTTCCTTCCTTTGTTACTAACTTAGTACCTCTGCCAACTTGTTGCAGCTGAGATCATTAACCAACCTCCAGATTATCGTGGAGGTTTGCTTCTCTTCCCATTTACACCTCTATGATATGAGTTAACGCGAATAAATATAATTCACCATGTGTATGTGTTCTGCATTATTTAAACATTATTGCCTTTTAACCTGTAATCAGAATGGGATCCATATGTATCGGATGATGAGTTTGGGACATCATTTGAGCTGAAGCGTACGGGTTGGGAAGTTGAGAAGTTTGCCTTAGACCTTGCTCGAAGCACAGTTGGACTCGAGTCTTTCACTGGTGCACATCTTTATAACATATGATTTTTCCTTGTGTTTGTATTGTCTTTAGTATACATAAATGGTTCAATTTCAATCTCTGCAGGAGAGAATCATCTATTCTCTTGCTCTGGTACTATTATTGAATTTCTGAATGGTATTTGTTCTGTGGTAACATCTACAAGTTTAATTAGATGTATGGACAAAGACGAGCAAGCTGATGAACTTAAGGTGACTGCATTCTTCTTTTCTTTGCTTTGTGGAATCGTTGTCTTTCTTCAATGGTGTCACTAAACTCTGCTATGTGATATTGGTCTCCAGATTAATGTATGGTTACCGAGTGGTGAAAAACGTGAGGGTTTTATTTCAAATGTGGATCTGTACTACAACATTTGTCTGGTTACAGTTCACTGTACTTCTAACCTGCCAAAGAAAAGCTTCAATGACGACACTGGATTTTTTGATTTATATGGCAACCATTCAAAAGATGTTGTAGCTTTAGGCCGTAGTTGTGAACCTTGGAGCTTGAAGGTGGCTTCGGGAAAGCTAATTCCAAGAAGACACCGATTCGATTGTGAAGAACTTCTTGTTTCTTCGTGCAAGATTACAAAGGTAGGTAATATGTATATACTTATTTTGCACATGTTTGATCCACTAATTTTGTTATTTTCATTTAAAAACTGTTTAATGGTGATTTGCTGCTTTCAGCCCCTTGTGTGAACACTGTTTCTTAGAGCTGTAGTTGCTAAATTTGTCATCGAATACAATGATTTTCTATGTGTGAATGGCTCTTGCTAAATTTGTCATAGAATACTTCCATATCATTTTATCTTAAATAGTTTCCACTAACATATGATTAGATACAATGCTCAAATATATGTGTAACAGACTATATTGATGCTTAAAACTACAGGTGAAAAAGAACAAAGGTACTTATGACCAATATTACACCATTATGATTGATGAGATCTATAACTTAACTGTGCATGTTGATGTTTGTCAACTCTTGAAGAGATACAGTTGGATTACTCTGCTATGACTTAAACAAAACATGCAACCCAATTGTGCATGTTAATTTTTTCTGCTGGTCAGGAGAGATACATTTGCAACACAGAAGTTCTGCTTAGATGGTGAAGCCATGGAACTAAACATTTTTTTTTTCAGCATGTACCCAAGATTTAAATATCTTCTCCAACAGCAACTTTGTTTCTCACAAATGATCAATTAATTGCTGTATTTTTTGCAGATAGGTGTTGGTGGTCCTTTGATGGATTTTAATGGAAATATCGTTGGAATGAACTTCTATGACAAGAAAGAAACACCTTTCCTTCCAAGTTTCATTGTGTTGAAGTGTTTACAGCACTTCAAAGAATTTGGGTATGTATTTCGGTCATATAGGTTTGAGTCATATATCAAATAGCTCGATTTGTATTTCTTCTGTTTTGTAAAGGAAATAGCATGATAGATTTGCATGTTTTAATCTACTAAAGTCATAGTTGTACCGTGTCAAAAAAAAAAGTCATAGTAGTGACAATATGCCCAAAACACAGATACATTATTTAGGTCGGCTTCTATAATTATTTGTAATATTGAAGTAAGAGATTGAACTGTTCTTGCATTTTTAGTTTAAGGTCCAAGTTTTTATAGACATGATTTACTAGTAAATATACTCTTCATCTTAAAAAAAGGTTCTGAGCTACATAACTAAGCAAGCAAAGCAATTAAGCTTGGTATGTCTAATTGTAGACTTTGGAAAGAAATTTCAGCATTTATGTTTAATTTTGTACTACTTTTTATTGGAACAAGCCAGTATGTCAATTAAATCTGTAGTGTATTTGATGTGCTTCTTGACTAATTATTTACATCATTTTTTTTAACATCCAGTCATTACTATACCAATCAAGTCACACTGTTAGTTCGTGGTAATATTGGGACAACTTAGTAAAACATGTGGTTTGCTTACCACTTTTAGAATAATGGATAAAATGCTGTCTGGTTATATAGGAAGGTTGTACGGCCATTGCATGGATTAAGGGTTGGAAATCTTCACAAAGAGCCTCTCGCTTCACTTGAGAAGATATGTCATGAGTTCCCTAAGGTTTGTGGTGTGATTGTGGAGAAGGTATGCATCCTTTTCTTATCATACAAATTTGTCACATTGATGTTAGTGAAATTGGAATTTTAATGGTCTATTCTTATCATACTAACTTGTCACATTGATGTTAGTGAATTTGGAAATTTCATAGTTTATTGTCATCTATTCAATCTTTTGTGGCCATAGAATTTTGGCTTAGGGATAAACCAAACGTCAAATAACTGTTTCATACCAAAAATTTGTTATCTGTAGAAATTTCCACTAACACCACATCAAAATTTGGTTAGGCATGAAAACAGACATACTATGGGCTGGTTTGGTATGCTAGCCTAACAAAATTTGGTAGCGCTAGAATTGCTCATTTTCGTAGCAAACCAAAAGCACACATACCTTAAACAAAATTTAGGATTGTTCCTTGCGACCTTGTGTAAATTTGGTGCTCTATTATTAGTAGCAAACCAAACAATGGCAGACAACAGTAAAATCTGGTAACAAATCAAATTTGGCAATGCAAATTTTGGCCAAAAAAAAGTAAGGTTGATTTTGGCATCAAATCAAGCATGCCTTATATGTTGTCTTTTTAATATGAGACCGAATTGGTCTTTGTCTTTTGATCTTATTATCAGCTAATTGAATCACATTTATCTGTTTTTATGGTCAGCTGTGGTGAATCAGTTGCTTTCTTTTGTGCGTTTATACTGTAGGTAGAACCTTCAGCAGAACATTCTGAGATAAAAGTTGGGGACATCATCACCCATCTTGATGGTATAGCTTTTTCCAATGCTGCAGAGGTATATTTCTTTTTCTTAACCTTAATTTTTTGTGGGAACAAAGAATTAATAAAGCATATTGTGCATGCTATTTGTCTTACTTTATTTTTTATTTGCCTCTTTGGTTTCCTTTTTCCTGCTGAGGGCATATGTAGCACACTTTTGACGACCATAAATACAATGGATACAAAGTAGAGTCCTTTATGTCTGACTGTCGAGAAACATAATAAAGTATGAAAGTCATGCCCATGATTCCAAAGATTTTCCTGTCATATACTGAAAAACAACTAAGTGGTTTGAGAATTCAAATAAAAAAAATATAGGAAAAAGCTACCCAAGGTAATAATCATCCGTATAACCGTTTCCATCAAGTTACCACCAGGAACTGGTAATCTAAACAGGATGAAATCCTAGGTGGTTTTCTAGATCTTATATGAACATAATGTTATACGATGATATTTTATTTGTTGTACAGTTCGGTGGCATACTGCTCGATAGGTGTGTCACACAGATGCTAGAAGAACAGAACTTGTCAGAGGACTGCAACCAGATGATAAGCCTCAAGGTTTTGTTGAGTTCATTAAGTTCTTCTGTAATGATTTTCATTGACATTCTAATTGTAGTTTTGCATCTTGAATATTGGATCCAGTTTTCTGTGAAAACAAGAGGTGGCATATCTGAAGCCACAACAAGAACAATCAACACTGACAAGTTTACTCCAAGTGGACTCAACAGGTAATTTGGTAGAAATTACAAACAGCATTGACATAGTTTTGATTCTAGAGAGATAAACAGCATAACTATTTATTCATGTGATGTATTGAATTTGTTATACTGCAGGTGGCCACTTCCCAGGCCGATTATTGTTCGGCAATATGCTCGTGGAGTTCTTTTCTCCGAAGATTGGTACAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029696