BGIOSGA029700

From RiceWiki
Revision as of 09:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029700| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029700, complete gene.| tag = OS09G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029700

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029700, complete gene.

LocusTag

OS09G0434100

Ensembl Transcript ID

BGIOSGA029700-TA

Ensembl Protein ID

BGIOSGA029700-PA

Length

5350

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14469809..14475158

Sequence Coding Region

14474997..14475158,14474718..14474909,14474401..14474454,14473982..14474070,14473654..14473906
,14473500..14473556,14472785..14472816,14472292..14472427,14472043..14472213
,14471142..14471732,14470917..14471054,14470718..14470816,14470211..14470311
,14470023..14470113,14469809..14469943

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14469809..14475158 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14469809..14475158 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCAAATCCAGAGCTTCTCGCGGCAGAACTGCGTGCTCCTCGCGGTGCTGTGTGGGAAGCACGCTGAGAAGCGTGCCCAGGCGAGGTCGGGGCCGGAGGCGAAGCGGCTGCGGCCGTCGTACCCGTTCCCGGAGCTCAGCTCGTCGGGGAGATTGGAGGTGCACACGCTGTTCAACCCGACACCAGAGCAGTTCCTCGAGGCGCAGCGCGTGGTTCAGCCCAACTTCTTGTACATCCAGGGGCAACAGCTTGAGGATGAGAAGGAGATTGGCTCGCTCGTCTGGGGGGACAATGACGTATCTGATCCGCAGGCGTTTAGTTGTCTCATCAGCCCGCCATTTCCGACCATAGTTTATCTGGAGGTTCCAATTGGTGAAAAACTTGCTCAAGCAGTTCATTCAAAGGGGATTCCATACGTAATATACTGGAGAAATTCATTTTCATCATATGCAGCATCCCATTTTCGCCATGCATTAATGTCAGTGGTTCAAAGTTCGGTGAGCCATACTTGGGATGCTTTTCAGCTTGCTCATGCATCCTTTCGATTATACTGTGTAAGAAACAACCATGTACAAAGTGTTAAGCTTGGGCCTCGTCTACTAGGGGATGCTCCAAAGATAAATATAACCCCTCCTGAGAATGAGATGGTTGAGGAGGAAGGTTCTTCAGATGTGTTTCCAGCTATAAAAATTTATGATGATGACATCAACATGAAATTTCTTCTTTGTGGAGTTCCTAGCACACCGGATCCTTGTTTGTTAGGTTCATTAGAAGATGGCCTGAATGCACTTCTGAATATTGAAATTCGGGGGTGCAAACTTCAGAATCGAATCAGTGCTTCTCCACCACCACTTCATGCTGCATCCTTACCACGTGGAATGGTTACAATGCGTTGCGACATCACTACGTGCAGTTCTTCTCATGTGTCACTTCTTGTTTCTGGTAGCGCACAAACTTGTTTTGATGACCAGCTTTTGGAAAGCCACATCAAGGATGAGATCATTGAGAAGAGCCAACTAGTCCATGCTCTGCCAAATAATGATGATAAGTTATCATCAATTGTGCCTTTCACTTCAATGTCCACAGCTTGTGGGGCTTCTACCTTTGAAGTTTGGATGACCCTTCCTAAGTGGGCAGCACAGGTTCTGAAGCATTTAGCGCCAGACATCTCATACAGGAGCTTAGTGGCACTTGGAATTGGTTGTATAAATGGCACGCCTGTTGCTTCATTTGATAGGCGAGATGCAGACCGCCTTCTTTTCTTTTGTACAAATCAACACAAAGATTTGGCTATTGAAAATGGCCCATACTTTCATCTGCCAAGATGGTCAGCATCTCTTACCAAGGAAAGAGTGAAGGTGGGTCTGGAATCGAAACCAAAATTGTTAGGTGCGAATGGAATTCCTGAGGACAAGAAACGTCTGATCGAAGGGCCTTCCTCATCTTCCAAGGCAAAATTGAAGCCTGCAACTATGAGGCCCATTCCTCACTCTAGAAAGCAACAAATGCATCCTTTTATGGGTTTCCTGGAAGCTACTGTTCATGAAACTAGTCAGGTTAAGCCAAACTTGCCAGCTGCTCCCCCAGTGAAGCATAATTCGGTACCTGCTGCTCCAACAACACATAGAAAATCAACTTCAGGGCCATCTCATGCTCAGTCAATCATTCAACTGAACCCACTGCCTCTGAAGAAACATGGATGTGATCGGTTGCCTATTCAGATGTGCTCTGAGGAGGACTTCTTGAAGGATGTCATGCAGTTTTTAATTCAGAGGGGTCATAATCGACTCGTACCTCATGGAGGACTAGCTGAATTTCCTGAGGCCGTCCTTAATGCGAAGCGCCTTGACCTATATAACTTGTACAAAGAGGTGGTGTCTAGGGGTGGCTTTTATGTAGGCAATGGTATAAACTGGAAGGGTCAAGTCTTCTCGAAGATGCGTAACCATACTGTGACAAATAGAATGACCGGTGTTGGAAACACACTGAAAAGACATTACGAAACATATTTACTGGAATATGAGCTAGCTCATGATGATGTAGACGGGGAATGCTGTTTGCTTTGCCACAGTAGCGCTCCTGGAGATTGGGTGAACTGTGGTTTGTGTGGTGAATGGGCACATTTTGGTTGTGACAGACGACAAGGCCTAGGCACTTTCAAGGATTATGCAAAGACAGATGGGCTGGAATACATCTGCCCTCACTGTAGTCTAGCAAACTATAAGAAGAAACCTCCTCCCCCCCAAAAGGTAGCTAATGGCTTTGCGAATACAGTGTCTGTATCACGAAATGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MSQIQSFSRQNCVLLAVLCGKHAEKRAQARSGPEAKRLRPSYPFPELSSSGRLEVHTLFNPTPEQFLEAQRVVQPNFLYIQGQQLEDEKEIGSLVWGDNDVSDPQAFSCLISPPFPTIVYLEVPIGEKLAQAVHSKGIPYVIYWRNSFSSYAASHFRHALMSVVQSSVSHTWDAFQLAHASFRLYCVRNNHVQSVKLGPRLLGDAPKINITPPENEMVEEEGSSDVFPAIKIYDDDINMKFLLCGVPSTPDPCLLGSLEDGLNALLNIEIRGCKLQNRISASPPPLHAASLPRGMVTMRCDITTCSSSHVSLLVSGSAQTCFDDQLLESHIKDEIIEKSQLVHALPNNDDKLSSIVPFTSMSTACGASTFEVWMTLPKWAAQVLKHLAPDISYRSLVALGIGCINGTPVASFDRRDADRLLFFCTNQHKDLAIENGPYFHLPRWSASLTKERVKVGLESKPKLLGANGIPEDKKRLIEGPSSSSKAKLKPATMRPIPHSRKQQMHPFMGFLEATVHETSQVKPNLPAAPPVKHNSVPAAPTTHRKSTSGPSHAQSIIQLNPLPLKKHGCDRLPIQMCSEEDFLKDVMQFLIQRGHNRLVPHGGLAEFPEAVLNAKRLDLYNLYKEVVSRGGFYVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAPGDWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLANYKKKPPPPQKVANGFANTVSVSRNV</aaseq>

Gene Sequence

<dnaseqindica>1..162#250..441#705..758#1089..1177#1253..1505#1603..1659#2343..2374#2732..2867#2946..3116#3427..4017#4105..4242#4343..4441#4848..4948#5046..5136#5216..5350#ATGTCGCAAATCCAGAGCTTCTCGCGGCAGAACTGCGTGCTCCTCGCGGTGCTGTGTGGGAAGCACGCTGAGAAGCGTGCCCAGGCGAGGTCGGGGCCGGAGGCGAAGCGGCTGCGGCCGTCGTACCCGTTCCCGGAGCTCAGCTCGTCGGGGAGATTGGAGGTGAGCTAGCATTCTCGGTTGGTGTTGTGGGGGGTGGTGATTTGTTTTGTTGTGCGAGCTGAAAACGAGGGAGATTTTCGAGTGCAGGTGCACACGCTGTTCAACCCGACACCAGAGCAGTTCCTCGAGGCGCAGCGCGTGGTTCAGCCCAACTTCTTGTACATCCAGGGGCAACAGCTTGAGGATGAGAAGGAGATTGGCTCGCTCGTCTGGGGGGACAATGACGTATCTGATCCGCAGGCGTTTAGTTGTCTCATCAGCCCGCCATTTCCGACCATAGTAAGCACAAACCTTTTGTCGAGCGTATGCAATATTTGTACTCTTTAGTTGAAAGAGCAGTAGAGCAACCTTTCCTTTGTCTACTATTAGCTGTTAATGGAAAACCAAAAAAGAAGGCCTCACAACTGCATCATTTCCTAGTTACATGATGGTCTCTGATATGTTCTGGGCACCACATTGTAGTGCCATACCATGGTATGTGAGAATTTGAAAACTTCCTCTGTCCGGGTGGTGCTAACCCTGCTTAACGGTTGTCAATACAGGTTTATCTGGAGGTTCCAATTGGTGAAAAACTTGCTCAAGCAGTTCATTCAAAGGTAGAAGTCTTCCATTTTCCTTTTTCAATATTCCATCTTGTTAATCAACCAAACCTTATAACATCGTTTTGAGACTGTAGTTCGTTCAGAAGTACCAAACGTTTTCCTTTTTTAGTCTGTCTCATTTAGATCATATCTTAACCCTACGACATAGTAGTAGTACAGTGCTAGTAGTTTTTCAACAAATGTCTAGACTCTGTAGGACGAAATTTTTGCTCTATATATTCTTTTATCTATAAACAAGCACTGAAATGTTGAACAACCAAGTATGCAGTACTATTTTACACATGACACTATTTGGAATTTAGCAGTGGTGATGTTTCATTTCAGGGGATTCCATACGTAATATACTGGAGAAATTCATTTTCATCATATGCAGCATCCCATTTTCGCCATGCATTAATGTCAGTGGTTCAAAGGTACCAGCATCCTTTTCCCTCTCTACCATCAACATCATACGGCAATAACAACTAATAATTTTCTTGTATATGTAGTTCGGTGAGCCATACTTGGGATGCTTTTCAGCTTGCTCATGCATCCTTTCGATTATACTGTGTAAGAAACAACCATGTACAAAGTGTTAAGCTTGGGCCTCGTCTACTAGGGGATGCTCCAAAGATAAATATAACCCCTCCTGAGAATGAGATGGTTGAGGAGGAAGGTTCTTCAGATGTGTTTCCAGCTATAAAAATTTATGATGATGACATCAACATGAAATTTCTTCTTTGTGGAGTTCCTAGCACACCGGTAAGCTTTGGTATTTTATATCCAAATTTCCTTACATCTTATTTCCTCTATTGTATGAATTGGTTTAATGGTGTTGTTAACCTCTTCTCTTCTGCAGGATCCTTGTTTGTTAGGTTCATTAGAAGATGGCCTGAATGCACTTCTGAATATTGAAGTATGGAATAAAGCATTGCAGCTCTACTGTACATTGATTATTTTTTATGGACCATGGAGTAAATTTTACACTATTTCCTGAAGAAAAGATGGAGTATAATGATTCTATGAGCAACCTTTGTTTTAGATACCTTAACTCAAGTTTGAAGAAACTAGGATCTCAGTATGTTAGATACTATTGAAACTGTTCTGTTTTCTTAACATTACAACATTTTGTTTTCTTGTTCAATATTTAGAAAAGGGATGTATTTTGCGTGTTAATTGTTCTGATTAAGGAAAGAGAGGGAGGGAGCGGAAATGTTTTGATGTACTGATGTGGCTCACAACAGCACTATGCATGAAACCACCCTAAATAACACCACACAAATAAAATCTAGATAGACATCTTAGTTTCAGTCTACAAGATGCTAGCAATAAAATGGTGGTTCAATTTTTTACTTGGCACCACCAAATCTCAGACTACGTTGTACACATGCTGGTTCTGAAAATCTGAAGTTAGCAGTCCATCCTTTTCTTGTATTATTTCTTGGTCGAAGGATGCAAACACATAGACTAGCATAGTGATATTTGATGCATCAGGATTTCTTTAGTTATTATCCACCAAGCTTTTATGCAAGTTCTTTCTTCTGTTTGTGTGTTGTTTTTGCAACTTATTGCTCTAACGGTTGATCTTGTTTTTGGCAGATTCGGGGGTGCAAACTTCAGAATCGAATCAGGTACGTTGAATTGTTGTCTGTTCTAGCTGTTTACATACCCGTACCTTTCTGTAGCATACTACCATGTCCATGACTCCTTTAGTTTTGTGCCATCTGTCAAGTTTGATTGTCATGCATAATGCTGTCAAGTTTCTTTTAGGGGTGGACAAACTGTTTCAGAAAATGTGTACTAGTGATCCTTTTTTCCTTTATGTTAGAGCTACTAATAAACTGTAGCTTATACTGTATACAATTTGCCTTATGCATGTTGGAGTTGTCCCAATATTGATTTTCCATCATACTTAAAATACCACTTAACAAATTGTTGTCTCTTCTGCTGCTGAGTATAGTTGATAAGACTTCTTTCATATGTGGCAGTGCTTCTCCACCACCACTTCATGCTGCATCCTTACCACGTGGAATGGTTACAATGCGTTGCGACATCACTACGTGCAGTTCTTCTCATGTGTCACTTCTTGTTTCTGGTAGCGCACAAACTTGTTTTGATGACCAGGTATGAATTTCTGCGAACCTGGATATATAATTCCTGATCTTACATGTACAAAATTATATGGCATCTACCTTTCTGCAGCTTTTGGAAAGCCACATCAAGGATGAGATCATTGAGAAGAGCCAACTAGTCCATGCTCTGCCAAATAATGATGATAAGTTATCATCAATTGTGCCTTTCACTTCAATGTCCACAGCTTGTGGGGCTTCTACCTTTGAAGTTTGGATGACCCTTCCTAAGTGGGCAGCACAGGTTGGATAACTGTATTGAACACACAAGATATGCTGTGATTAGAAGTGCAGGGTGTGCTTATTTGCTCATATTTTTATTCATTACTTGGCTTCTCTTTATCTTTTTTTTTTCCGATGCACCGACTGAAAGTTCATAATGTTGTGTAATTCTATTGTAAAAGGCTCTTCTCATGCTTTTGCTTTTGATCTCCAAGAACAGTGATTAGTTATGAAAGCAACAAAAGTCTTCAATCTCATTATCTAATCCTCACATGTAAAACATTATTTGTTAATCTTTGACTGACCATCAATATTTTTATCTGAATAATTAGGTTCTGAAGCATTTAGCGCCAGACATCTCATACAGGAGCTTAGTGGCACTTGGAATTGGTTGTATAAATGGCACGCCTGTTGCTTCATTTGATAGGCGAGATGCAGACCGCCTTCTTTTCTTTTGTACAAATCAACACAAAGATTTGGCTATTGAAAATGGCCCATACTTTCATCTGCCAAGATGGTCAGCATCTCTTACCAAGGAAAGAGTGAAGGTGGGTCTGGAATCGAAACCAAAATTGTTAGGTGCGAATGGAATTCCTGAGGACAAGAAACGTCTGATCGAAGGGCCTTCCTCATCTTCCAAGGCAAAATTGAAGCCTGCAACTATGAGGCCCATTCCTCACTCTAGAAAGCAACAAATGCATCCTTTTATGGGTTTCCTGGAAGCTACTGTTCATGAAACTAGTCAGGTTAAGCCAAACTTGCCAGCTGCTCCCCCAGTGAAGCATAATTCGGTACCTGCTGCTCCAACAACACATAGAAAATCAACTTCAGGGCCATCTCATGCTCAGTCAATCATTCAACTGAACCCACTGCCTCTGAAGAAACATGGATGTGATCGGTTGCCTATTCAGATGTGCTCTGAGGTATGCTTCTTGGGTCTTACATGAGGATGAAGTGCTTCTATACAAGTACATTATTGTGCTAAAATAATGTGTTTAACCTTTTTCTAGGAGGACTTCTTGAAGGATGTCATGCAGTTTTTAATTCAGAGGGGTCATAATCGACTCGTACCTCATGGAGGACTAGCTGAATTTCCTGAGGCCGTCCTTAATGCGAAGCGCCTTGACCTATATAACTTGTACAAAGAGGTAATGCTAAAATTAGCACATTCTGGTTTATGCATAGCAAGGTGATCAGAAGAAGACATTTTCTTTGGCTCGTTTCCTGACGAAGTGTTTGTTTTTTCAGGTGGTGTCTAGGGGTGGCTTTTATGTAGGCAATGGTATAAACTGGAAGGGTCAAGTCTTCTCGAAGATGCGTAACCATACTGTGACAAATAGAATGACCGTATGTATCCACTATTTACTACTGTGACAAATAGAATGCGTAACCTTGAAGGCATTTTCTTATTGGATCTTAACCTGTGCCACTTTTAGCATGCTATAGTTTTGCTGTTATCTTAGTGCCACTAACATATGTCTTTATGCCATTTTGTTCACACTACTTTCACGTATTAAATTTATCATTTCCTTTGTTGGTGAGTCTGGTAAAAGCTACTAACTAATTGATGGACTACTCAGCTTCAGCATCATTGTCTTTCATCTATGTTGAAATATATATACGGAGTAGTAGTTCATTTTGATGTAAATTCATCATAAAGTGCCACCTTATTTATCTCTGCTACTACCTTCAACAAATTCTGTTAAGTGAAATGTTAAATGTTAACTGTACACATTTGTCCTAAAATGTTTAGGGTGTTGGAAACACACTGAAAAGACATTACGAAACATATTTACTGGAATATGAGCTAGCTCATGATGATGTAGACGGGGAATGCTGTTTGCTTTGCCACAGGTTTGAGGACATCCCTTTCTATGCCTCCTTTGGTTCCCCAATTTGCGATTATGGTTTGTCATAATCGAATCTAACACCATCTCCTGTGTAATTCCAGTAGCGCTCCTGGAGATTGGGTGAACTGTGGTTTGTGTGGTGAATGGGCACATTTTGGTTGTGACAGACGACAAGGCCTAGGCACTTTCAAGGTTAGAAAAAAAAAAACTTTTAGTTCAGTCCTTTTCTATTGGTCATAGCTTGATCTTATATGAGTCACCTTCTTTACAGGATTATGCAAAGACAGATGGGCTGGAATACATCTGCCCTCACTGTAGTCTAGCAAACTATAAGAAGAAACCTCCTCCCCCCCAAAAGGTAGCTAATGGCTTTGCGAATACAGTGTCTGTATCACGAAATGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029700