BGIOSGA029719

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Revision as of 09:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029719| Description = Glutamate receptor| Definition = Oryza sativa Indica Group BGIOSGA029719, complete gene.| tag = P0689B09.15| tid = B...")
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Gene Name

BGIOSGA029719

Description

Glutamate receptor

Definition

Oryza sativa Indica Group BGIOSGA029719, complete gene.

LocusTag

P0689B09.15

Ensembl Transcript ID

BGIOSGA029719-TA

Ensembl Protein ID

BGIOSGA029719-PA

Length

5292

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14124060..14129351

Sequence Coding Region

14129087..14129351,14127008..14128344,14125739..14126042,14125134..14125540,14124060..14124548

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14124060..14129351 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14124060..14129351 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATGGAGGGAGCAGCTGGAAGGGCTGCAATCTTCTTCCTGTTCCTCAGTCTGACTGTTGCTCAAAATATCACTGGGAGTGGAGAAGATACACTGAATGTTGGAGTGATTCTCCACCTGAAGTCGTTGGTGGGCAAAATGGCACGTACCAGCATTTTGATGGCTGTGGAAGATTTCTATAAAGCCCACAGGAACTTTAAGACAAAGCTGGTTCTCCACATTAGGGATTCCAATGGAGATGATATCCAAGCTGCATCAGAAGCAATTGACCTGCTGGAAAATTACAACGTGCGAGCTATTGTTGGCCCACAAAAATCTTCAGAGGCTACATTTGTGTCAGATCTTGGGAACAAGAGCCAAGTCCCAGTTATCTCCTTCACTGCAACAAACCCCACTCTATCATCTATCAATGTGCCATATTTTTTGCGTGGGACATTAAGTGATGTTGCTCAAGTGAATACACTTGCTGCTCTCGTTAAGGCATATGGCTGGAGGGAAGTGGTGCCCATCTATGAGGATACGGACTATGGTAGAGGAATCATACCATACCTGGCTGATGCCCTCCAGGAATTCGGAGCATCTATGCCTTATCGTAGTGCAATATCTGAATCAGCAAATACTGACCAAATTGAGCGAGAACTCTACAAGCTAATGACAATGCAGACTAGAGTCTATGTTGTTCATATGTCAACAAACATTGGATCAATTCTCTTCAAAAAGGCCAAGGACTTAGGAATGATGAGTGAAGACTATGCATGGATTTTGACAGATGGCATTTCAAATATTGCTAATTCGCTAAGCCCTTCAATTCTTGACGAAATGAGTGGTGCAATCGGTGTCAGGTTCTATGTGCCTGCATCAAAGGAACTTGATGACTTCACTACAAGATGGAATAAGAGGTTTAAAGAAGACAACCCAAATGATCCACCATCACAACTAAGTATTTTCGGGCTTTGGGGTTATGATACTATTTGGGCATTAGCACAAGCAGCAGAAAAAGTAAGAATGGCTGATGCCATATTTCAAAAGCAGAAAGATACAAAGAACACAACATGTTTGGGAACTCTGAGAATTTCTGCAATTGGTCCGAAACTCCTAGATTCAATCTTACATAGTAAGTTCAGAGGTCTAAGTGGTGAATTTGACCTTAGAAACAGGCAGCTGGAGTTTTCCACCTTCCAGATAATTCATGTGGTTGGAAGTCAGTTAAAAGAAATAGGCTTTTGGACAGCAAAACATGGAATCTTCAGGCAATTGAACAAAAATAAATCAAAAACAACAAACATGAACTCTGTGCCTGATCTTAATCCAGTAGTGTGGCCAGGAGAAGTACATACAGTGCCCAAAGGATGGCAAATTCCTACTAATGGAAAGAAACTCCGTATAGGTGTACGGACAAATGCGTATCCTGAGTTTATGAAGGTGGAAAGTAATCCTGTAACCAATGAAATAACCGCCTCTGGGTATGCAATTGATGTATTTGAAGAGGCGTTGAAGAGACTTCCATATGCAATACCTTATGAATATGTATCATTTGATAATGGACAAGGAATAAACTCTGGGAGTTATAATGATTTTGTCTACCAAGTTTATCTAGGGGTATATGATGCAGCCATTGGGGATATAACCATCAGGTACAATCGAACTTCATATGTTGACTTCACACTACCATATACTGAATCTGGGGTGGCAATGATTGTGCCAGTCAAGGACGACAGGAATAAGAATACATGGGTTTTCTTGAAGCCATTAACTACTGACCTGTGGTTTGGGAGCATCGCCTTCTTCATCTACACAGCAATTGTAATATGGTTGTTGGAGCGACGAAGCAATAATGCTGAACTGACTGGCTCATTTCTCCGCCAGCTTGGCATAGCAATATATTTCTCGTTCTTTGCAGATAGGGAAAGGGTGGACAGCATTTTGTCTAGACTGGTTGTCATTGTATGGGTCTTTGTGCTTCTCGTGATTACATCAAGTTATACAGCCAATCTATCATCAATGCTAACTGTGCAACAGCTTCAGCCCACAGTAACTGATGTTCATGAGCTCCTTAAAAATGGAGAATACGTAGGGTATCCAAATGGTTCTTATGTGGCCGATCTATTAAGAGGACTTGGTTTTGATAGAACAAAATTGAGGGCATATAATGATTTAGATGGCTTTGCCGATGCACTCGCCAAAGGGAGCCAAAATGGTGGTATTTCTGCTGTCATAGATGAAGTTCCATACATAAAAATTTTTCTTGCAAAGCACTGCAAAGGGTACACAATGATAGGACCAATTTACAAGTCTGAAGGTTTTGGCTTTGCATTTCCCAAAAGATCCCCACTGGTTTACGACTTCTCAAGGGCAATCCTCAGCATAACAGAGGGAGATTCTATAATTAATATAGAAAAGAAATGGATTGGGGACCAACATGCCTGTCAGAATGATGGCACGATCATAAGCTCAAGCAGTCTAAACTTTAACAGCTTTTCAGGACTTTTTCTAGTCACAGGAGTTGCATCAACCTCAGCCCTTTTAATAGCCCTGGTGATGTTTCTCTACAAGAATAAGCACAGGATAAGGAACAGCATACGACGTGACCAGACTCAGAAAGGATATGAAGCAGAGCGAATAAATGAACAAAATCAAGAAATGACAATACACTCCAACCAGGTTCACAACCTGCAACTGACAGTGCCAGATGATTCAGATGAATATCGCTGTCAACAAGACGGGGAAATATCCATAGAGCAAAGCCCAGCTTCAGAGGTCCAAACAAGTCCGTATTTTGCATCTCATGCACAACAATAA</cdnaseq>

Protein Sequence

<aaseq>MGMEGAAGRAAIFFLFLSLTVAQNITGSGEDTLNVGVILHLKSLVGKMARTSILMAVEDFYKAHRNFKTKLVLHIRDSNGDDIQAASEAIDLLENYNVRAIVGPQKSSEATFVSDLGNKSQVPVISFTATNPTLSSINVPYFLRGTLSDVAQVNTLAALVKAYGWREVVPIYEDTDYGRGIIPYLADALQEFGASMPYRSAISESANTDQIERELYKLMTMQTRVYVVHMSTNIGSILFKKAKDLGMMSEDYAWILTDGISNIANSLSPSILDEMSGAIGVRFYVPASKELDDFTTRWNKRFKEDNPNDPPSQLSIFGLWGYDTIWALAQAAEKVRMADAIFQKQKDTKNTTCLGTLRISAIGPKLLDSILHSKFRGLSGEFDLRNRQLEFSTFQIIHVVGSQLKEIGFWTAKHGIFRQLNKNKSKTTNMNSVPDLNPVVWPGEVHTVPKGWQIPTNGKKLRIGVRTNAYPEFMKVESNPVTNEITASGYAIDVFEEALKRLPYAIPYEYVSFDNGQGINSGSYNDFVYQVYLGVYDAAIGDITIRYNRTSYVDFTLPYTESGVAMIVPVKDDRNKNTWVFLKPLTTDLWFGSIAFFIYTAIVIWLLERRSNNAELTGSFLRQLGIAIYFSFFADRERVDSILSRLVVIVWVFVLLVITSSYTANLSSMLTVQQLQPTVTDVHELLKNGEYVGYPNGSYVADLLRGLGFDRTKLRAYNDLDGFADALAKGSQNGGISAVIDEVPYIKIFLAKHCKGYTMIGPIYKSEGFGFAFPKRSPLVYDFSRAILSITEGDSIINIEKKWIGDQHACQNDGTIISSSSLNFNSFSGLFLVTGVASTSALLIALVMFLYKNKHRIRNSIRRDQTQKGYEAERINEQNQEMTIHSNQVHNLQLTVPDDSDEYRCQQDGEISIEQSPASEVQTSPYFASHAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..265#1008..2344#3310..3613#3812..4218#4804..5292#ATGGGGATGGAGGGAGCAGCTGGAAGGGCTGCAATCTTCTTCCTGTTCCTCAGTCTGACTGTTGCTCAAAATATCACTGGGAGTGGAGAAGATACACTGAATGTTGGAGTGATTCTCCACCTGAAGTCGTTGGTGGGCAAAATGGCACGTACCAGCATTTTGATGGCTGTGGAAGATTTCTATAAAGCCCACAGGAACTTTAAGACAAAGCTGGTTCTCCACATTAGGGATTCCAATGGAGATGATATCCAAGCTGCATCAGAAGGTACATTTCACAATCTGTAAATTTTAGCTAAGATTGTCAAATTTTGAGTCAATACTGCATCATAATGATGCGAGATACGATAAAGAAGTTGCTTCCTATGTCCCAAAATATAGCTACTGCTAGTACTTTGTTACGGAATACTCTTTGATCGTAGGGAACTTCAACAACTTGAAATTCTTTAGATTAAAACTTTATGGAGGAAACACAGAAAAAAAAAGCACTGAAACGATAAGCTTTTATCATCTATATAATTCTTTATTTCACACTTCTCTTTTCTACTGCTGCTGCAAATCTTCAAAACAACATGTGCATATACAACTTCTCTTTTATAAATATCATAAATTTAAGCAAAAATAAAAGGCTGAATTTCATGATAACTCCATGGATCTGTATGCAGGTAAAAGTGAGGGCCTCCCCACTTTTAAGTTTATGCAACTGTAATTTACAAATGAATCCTTCTATTTTGAGTTCTCTTATTAGCAACTCCTTCAATTCTGGAGAAACAAAGAAAGTTCCATACCAAATATAGTTAAGTCATATAGAGGGTGCTCCCTGTTTTGCTCTGCTTTGCTCAATGCCTGAATACACCACTATAATAAGAATAGCCAATTATATTCTAAGGAAGTTACAACATAACTAGTTCTATATGCATAACACTTCTAGTTGCATTAAGATTCTTAGCTGCAATTAATATGAACACAGATATTCTTCAAATTAATTGTTTTTCTATTAAATTATAAAGCAATTGACCTGCTGGAAAATTACAACGTGCGAGCTATTGTTGGCCCACAAAAATCTTCAGAGGCTACATTTGTGTCAGATCTTGGGAACAAGAGCCAAGTCCCAGTTATCTCCTTCACTGCAACAAACCCCACTCTATCATCTATCAATGTGCCATATTTTTTGCGTGGGACATTAAGTGATGTTGCTCAAGTGAATACACTTGCTGCTCTCGTTAAGGCATATGGCTGGAGGGAAGTGGTGCCCATCTATGAGGATACGGACTATGGTAGAGGAATCATACCATACCTGGCTGATGCCCTCCAGGAATTCGGAGCATCTATGCCTTATCGTAGTGCAATATCTGAATCAGCAAATACTGACCAAATTGAGCGAGAACTCTACAAGCTAATGACAATGCAGACTAGAGTCTATGTTGTTCATATGTCAACAAACATTGGATCAATTCTCTTCAAAAAGGCCAAGGACTTAGGAATGATGAGTGAAGACTATGCATGGATTTTGACAGATGGCATTTCAAATATTGCTAATTCGCTAAGCCCTTCAATTCTTGACGAAATGAGTGGTGCAATCGGTGTCAGGTTCTATGTGCCTGCATCAAAGGAACTTGATGACTTCACTACAAGATGGAATAAGAGGTTTAAAGAAGACAACCCAAATGATCCACCATCACAACTAAGTATTTTCGGGCTTTGGGGTTATGATACTATTTGGGCATTAGCACAAGCAGCAGAAAAAGTAAGAATGGCTGATGCCATATTTCAAAAGCAGAAAGATACAAAGAACACAACATGTTTGGGAACTCTGAGAATTTCTGCAATTGGTCCGAAACTCCTAGATTCAATCTTACATAGTAAGTTCAGAGGTCTAAGTGGTGAATTTGACCTTAGAAACAGGCAGCTGGAGTTTTCCACCTTCCAGATAATTCATGTGGTTGGAAGTCAGTTAAAAGAAATAGGCTTTTGGACAGCAAAACATGGAATCTTCAGGCAATTGAACAAAAATAAATCAAAAACAACAAACATGAACTCTGTGCCTGATCTTAATCCAGTAGTGTGGCCAGGAGAAGTACATACAGTGCCCAAAGGATGGCAAATTCCTACTAATGGAAAGAAACTCCGTATAGGTGTACGGACAAATGCGTATCCTGAGTTTATGAAGGTGGAAAGTAATCCTGTAACCAATGAAATAACCGCCTCTGGGTATGCAATTGATGTATTTGAAGAGGCGTTGAAGAGACTTCCATATGCAATACCTTATGAATATGTATCATTTGATAATGGACAAGGAATAAACTCTGGGAGTTATAATGATTTTGTCTACCAAGTTTATCTAGGGGTAAGAAATTTTTATTCTCAATTTATCAAATTTATGCCACAGAAATCAGTATGCTCACTTGAAATTTTAATAAAGCAAATTTAATTATTCTCTGACTTTTCTTTTTGCAAAACTGTATTCACCTACCCTTATTGGAACAATTCAGGTGATTTTTTATGTTGTTCAGTTTGGATATATTTATCATTTGTTTTCTTACACAACATTTTCCACCATATTGGTAGCAAGCATTGGCGCAGTCTCGTGTATACAAATTTGAACTATTTTTTTAATTATATGTCAGTCAAAATTATCCTAACATAATAGTGTGAAAGTAGTTTTGATGAAAAATACACCCTCCTTTCCATGTTATAAGTCATTTTAGTTTTGTCCTAAGTCAAACCTCTCAAACTTTGACTGAGTTTACAAAATAATAATAATAATAATACACCAACACTTACAACATCAATTTAGTTTCATTAAATCCACCATGAAATATGTATTGATAGTGTATTTAGTTTTTATTGTAGATGCCGGTGCATTTTTCTATAAACTCGGTCGAAGTTAGAGAAGTTTGACTTTGGACAAAAGTAAAATGACTTACAATGTGGAACAAAGGGAGTAGTAGCGTTCCCATTTGATAAATCCTTTTGTGTATATCAGTGGTCAGAGTTTCAAAACTTGACAATACATGTTCTGAAATGAATTTTAATAGTAGATGGGTATATAATAAAGGAAAAAGTCTATTTAATCCCCTGAAGTATGTATGTAAAATAGATTGCAGTACTTTTCCTTTTCAGATTGAACCTTTTTTATGCTTTCTACTATGGTACATCTTGGTATCTCCTCAAGGATGATAAGAAGTTCCATTCAGATTAGATCGATTGGCATGATGGAACTATACCCATGTTTTCTGCCATTTTCCACAAATTATCATACATTTCAAGAGTAACTGAAATAACAATTTTTTTTTAAAAAAAACCTTGCAGGTATATGATGCAGCCATTGGGGATATAACCATCAGGTACAATCGAACTTCATATGTTGACTTCACACTACCATATACTGAATCTGGGGTGGCAATGATTGTGCCAGTCAAGGACGACAGGAATAAGAATACATGGGTTTTCTTGAAGCCATTAACTACTGACCTGTGGTTTGGGAGCATCGCCTTCTTCATCTACACAGCAATTGTAATATGGTTGTTGGAGCGACGAAGCAATAATGCTGAACTGACTGGCTCATTTCTCCGCCAGCTTGGCATAGCAATATATTTCTCGTTCTTTGCAGATAGTGAGTGACTATACTTGTTTTCTTATCTACATACAGAATACTGCGTTTGTCAAATTCAGTGAGAAAGAGCTGACAAAAAAGCAATTTATTTTACAATACAGTCTTTATCAAACAAAGGGATACAGGCATAATAAGAGTAAATTCAGAGCATCAGTGTTAATTTGAAGTTCTAAAATATGATGGTTCACAATTTTGCAGGGGAAAGGGTGGACAGCATTTTGTCTAGACTGGTTGTCATTGTATGGGTCTTTGTGCTTCTCGTGATTACATCAAGTTATACAGCCAATCTATCATCAATGCTAACTGTGCAACAGCTTCAGCCCACAGTAACTGATGTTCATGAGCTCCTTAAAAATGGAGAATACGTAGGGTATCCAAATGGTTCTTATGTGGCCGATCTATTAAGAGGACTTGGTTTTGATAGAACAAAATTGAGGGCATATAATGATTTAGATGGCTTTGCCGATGCACTCGCCAAAGGGAGCCAAAATGGTGGTATTTCTGCTGTCATAGATGAAGTTCCATACATAAAAATTTTTCTTGCAAAGCACTGCAAAGGGTACACAATGATAGGACCAATTTACAAGTCTGAAGGTTTTGGCTTTGTAAGTTAACTTGATAGATATTCTGTCCACATCACATATCTTTGAAGTTTGAAAATCCTAGTAAATACATAATTGAGATTGGCCCATACTTATGAAAACATATATAAAACATTTGGAAACAGAGGCACACATAATAAAATCCAAGATGATAACAAACCTGTGGTCTCTAGACAAGATGTGTGTTATTTAATGCCAGTTGAATTTAAAACATGCATTTAACATGGTAAATAACCCCACTAGATACCTCCGTCGTTTTAGGATGTGATAATCTCATAGTCTATAACACTGCTCTGGGCAATTTTCTGGTTTTCCGTTGAATCCTTTTTTTCTTAATTGATAGTGCCCCTACTTATGTGCTACTTAGCTGATGGATAAAACCTCAAACCATAGCCCGCAGGCATGACTTTGCAAAATCTAACTGCAACTATCTACCTTGTAATTTATTTACCTTAAATATATTTTTCATCAATATTATGGAGAATCTTAGAATGTTCGCCCTTAGAAATCTATCACATTAGGCCTAAAGTTAATTCTGCATTACTTATCGGTTTGTAAGTAACTGAATTAGTTATATTTCTTGTGTAGGCATTTCCCAAAAGATCCCCACTGGTTTACGACTTCTCAAGGGCAATCCTCAGCATAACAGAGGGAGATTCTATAATTAATATAGAAAAGAAATGGATTGGGGACCAACATGCCTGTCAGAATGATGGCACGATCATAAGCTCAAGCAGTCTAAACTTTAACAGCTTTTCAGGACTTTTTCTAGTCACAGGAGTTGCATCAACCTCAGCCCTTTTAATAGCCCTGGTGATGTTTCTCTACAAGAATAAGCACAGGATAAGGAACAGCATACGACGTGACCAGACTCAGAAAGGATATGAAGCAGAGCGAATAAATGAACAAAATCAAGAAATGACAATACACTCCAACCAGGTTCACAACCTGCAACTGACAGTGCCAGATGATTCAGATGAATATCGCTGTCAACAAGACGGGGAAATATCCATAGAGCAAAGCCCAGCTTCAGAGGTCCAAACAAGTCCGTATTTTGCATCTCATGCACAACAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029719