BGIOSGA029770

From RiceWiki
Revision as of 09:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029770| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029770, complete gene.| tag = P0643D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029770

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029770, complete gene.

LocusTag

P0643D11.18

Ensembl Transcript ID

BGIOSGA029770-TA

Ensembl Protein ID

BGIOSGA029770-PA

Length

2844

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13212490..13215333

Sequence Coding Region

13215172..13215333,13213454..13214089,13212939..13213037,13212490..13212840

Genome Context

<gbrowseImage1> name=IndicaChromosome09:13212490..13215333 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:13212490..13215333 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACGGCGAGCACGTCCGGCGAGTGGCTGAAGGGCGCGCTGCAGGAGCTGCGGGAGCGGATGGGTGGCGCGCTGGAGCTCGACGCGGACCTCATCTCGGGCCTCGTCTCCTTCTGCGAGCTCGCGCCTCCGCCCGACGCCGCTGACTACCTCGCGAATATTATTGGAGTAGAAGCTGCTCAGGACCTTATTCAGGAGTACTTGCAGAGGAGGGGTTACATTGATCCATTGAAGGGCAATGAAAACCTACAATCATCAAATCTTCAGCCTTATGTGAAGCCTTCTGCTGAAGCTGGGCCTACCCAAACCAAGAAGCAGACACGCACACAAAAAGATGCAGCAGCATCTTCTTCTGGCCAGAGTTCCAAGAATCAACCAGAGACTACTGAACCCCGAGTTGCCTCCAAGAGAGGTTCAAAGAAGAAAGCAGTAAAGGCCATCTCCCTTGCTGAGGCAGCGAAGGGTTCTATTGTCTTCAAGCAGGGGAAACCTTGTTCATGCCAAGCACGCCAGCACAACCTTGTCAGCAACTGCTTATCATGTGGCAAAATTGTGTGTGAACAAGAGGGTGAGGGACCATGCAGTTTCTGTGGTGCACTTGTTCTAATGGAAGGAAGCACATATGCTGGTTTAAGTGATGTTGGAATTCCTCTTTCGGAAGCAGAAGCTGAAGCTGAAGCATATGCAAAGAGGCTTGTTGACTATGACAGAAACTCTGCAGCAAGGACTAAAGTTTATGATGATCAAAGTGACTACTTTGAAATGGAAGGAAATAGTTGGCTTTCTTCAAAGGAAAAGTCAGACCTAAAGAAGCAGCACGGGGAAGCTCAGGAAGCAGCTGAAAAGGATAAAGGGAAAGTGGTCGTCACATTTGATTTGGTGGGCCGCAAGGTAATTTTGAACAAGGATGGAGCCACCGTGTTGGAATCCGAGCACCGGATCTTGGGACCACCTGAAGAGAAGGATCAGATCCACCGCATACAAGCCAACCCCACAATCAGAGAGCAGCCCGTGTTCATCGAAACAGGGCCAGTGAAGCCAAAAACTGACAGAGCTCGACAGAGCAAGAGACTCGCCAAGAATGGCCTGTGCCTGGAGGTAACTGGGAGGCTGCAGCACGATGACAAGGACCCCCAGAGCTTCCTGGGTGGCAAGACGAAGAAGGGTGATCATCTGGCGTACAGTTCTTTCGGCCAACCCCGTGAAGGGGACGACTTCGACTGCTCCCAAGATTTTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MAATASTSGEWLKGALQELRERMGGALELDADLISGLVSFCELAPPPDAADYLANIIGVEAAQDLIQEYLQRRGYIDPLKGNENLQSSNLQPYVKPSAEAGPTQTKKQTRTQKDAAASSSGQSSKNQPETTEPRVASKRGSKKKAVKAISLAEAAKGSIVFKQGKPCSCQARQHNLVSNCLSCGKIVCEQEGEGPCSFCGALVLMEGSTYAGLSDVGIPLSEAEAEAEAYAKRLVDYDRNSAARTKVYDDQSDYFEMEGNSWLSSKEKSDLKKQHGEAQEAAEKDKGKVVVTFDLVGRKVILNKDGATVLESEHRILGPPEEKDQIHRIQANPTIREQPVFIETGPVKPKTDRARQSKRLAKNGLCLEVTGRLQHDDKDPQSFLGGKTKKGDHLAYSSFGQPREGDDFDCSQDFD</aaseq>

Gene Sequence

<dnaseqindica>1..162#1245..1880#2297..2395#2494..2844#ATGGCGGCGACGGCGAGCACGTCCGGCGAGTGGCTGAAGGGCGCGCTGCAGGAGCTGCGGGAGCGGATGGGTGGCGCGCTGGAGCTCGACGCGGACCTCATCTCGGGCCTCGTCTCCTTCTGCGAGCTCGCGCCTCCGCCCGACGCCGCTGACTACCTCGCGGTCCGTACCCATACTATCCATCATCCCCCCTACGATGATGCGTAGCTATGCAGGGGTTACTCTATTTAGGTTCTGATCGGAGATGGTTGTGCGATTGTTAGTTTGTTTGGTGTGTCGCGGGTGGCCTGATCTGTGCGTGCGCCTTTGTCGGGTTAGGGTTTGTGAGATTTGATTTAGCGATTTCTAGGGTTAATTTTGAAAGTCTGATCGTCGGTGTGTCGCGATTTTTGGTGCGAAGTTTGATGCGTTGTGCTGCTTCCCTCTTTGGTTTTGGGATTTCTGCGAGTTATTATTGCAAAGGGAGGATAACATGAATACTTAAGCGGGGTTAGAAAAACAATGTATGGCTCATGGATTTGTTAGAGAATAGAGAAGGGGGATTTGCAATTATGATACTATTAGAATATGATGATACTATTATGAATTATACCGTGATGAATGAAACTCTATAACCTGATGCGTCACTTTAAGTTTAAGCACGATGAGTAGTGCATTAGAACAGTCTTTTACCTAAGAGGTGTATCTGCAATCTCGGAGCAGCATGGTGCTTGAATTGTTGAGTTAGCTGTGTTTCTGTTCAGTTGTTAGTTTGTATCCATGTCTATTTATGCGGCTGCAACTTTTCATCAAAGACATAATTGCAGAACTTGTGTGCAATGATACCTTTTTTTTTTCCTAGCAAACATGTCACTTTGAATTGAAATTTGAAACTCTAGGCTTGATCACGAATTTACATACCCCTGATGTGCATCTGCAATGAAGTTGAAAGGACTATGACCAGGAATTTACATATCCCTGATACACATCTGCAATAAAGTTGAAAGGACTATCTTGTGTGTTCAGTCCAAAAATAAGATGTTCCTATCTATTCCTCCTAGCTTTCTGTTCTCAACTGGACATTTGGTGTTCGCGAGGATTTTTAGTTCTATTTTCTTTATTTGTTTCATATTGCTCATCTTCGAGTGACACTGCTTGCCATTAGGTAAATATTATGCATGAATGCATCTGAAATTACTGTTGCTTAGTCCTTTGTCCTTTGTCTTTATTCTTCATCATTGATCATGGTCAGTGTAATGGTGCAGAATATTATTGGAGTAGAAGCTGCTCAGGACCTTATTCAGGAGTACTTGCAGAGGAGGGGTTACATTGATCCATTGAAGGGCAATGAAAACCTACAATCATCAAATCTTCAGCCTTATGTGAAGCCTTCTGCTGAAGCTGGGCCTACCCAAACCAAGAAGCAGACACGCACACAAAAAGATGCAGCAGCATCTTCTTCTGGCCAGAGTTCCAAGAATCAACCAGAGACTACTGAACCCCGAGTTGCCTCCAAGAGAGGTTCAAAGAAGAAAGCAGTAAAGGCCATCTCCCTTGCTGAGGCAGCGAAGGGTTCTATTGTCTTCAAGCAGGGGAAACCTTGTTCATGCCAAGCACGCCAGCACAACCTTGTCAGCAACTGCTTATCATGTGGCAAAATTGTGTGTGAACAAGAGGGTGAGGGACCATGCAGTTTCTGTGGTGCACTTGTTCTAATGGAAGGAAGCACATATGCTGGTTTAAGTGATGTTGGAATTCCTCTTTCGGAAGCAGAAGCTGAAGCTGAAGCATATGCAAAGAGGCTTGTTGACTATGACAGAAACTCTGCAGCAAGGACTAAAGTTTATGATGATCAAAGTGACTACTTTGAAATGGAAGGAAATAGTTGGCTTTCTTCAAAGGTAAATTTTATATTTGCATTCCTATCCTAATGACTCATTTAAACACCTTTTTACTGATTCATTGTGCTAAACAGCCTTATAGAATGTTCCTGTTGTTTATTTATATGTGCACACTTCACCCAATCCTGCCTGCAAATTGTTTTTTCAATCAGAATTGCTGGTTGCCTTTTTGGAGGACACTAATGAACATATACTACAAACCTTGGAGAAAACAGCGGCACTCTTAATTACATCTTACGCTTGAAATTTCTTGCACAATTGGCATTTGATATATCATCATATTTATATGATAAGAACATATAACTTGACGGGATCAGACAGCAATTTACTGTGCAACTATTTGAGATACTAGCAAATTTGTCCAACCAAACCATTTGGAACAATGTTAAGTAAGTTCTCAATCTTTCTTGCTTCAGGAAAAGTCAGACCTAAAGAAGCAGCACGGGGAAGCTCAGGAAGCAGCTGAAAAGGATAAAGGGAAAGTGGTCGTCACATTTGATTTGGTGGGCCGCAAGGTAATACAATGACGTTCCTGTTGCACAGCATCTAATTTGCTTAAAGCTCTAGGCAAAACATTTGGAAGAGGACGTAATTTTGCAACTGTTTCTGACAGGTAATTTTGAACAAGGATGGAGCCACCGTGTTGGAATCCGAGCACCGGATCTTGGGACCACCTGAAGAGAAGGATCAGATCCACCGCATACAAGCCAACCCCACAATCAGAGAGCAGCCCGTGTTCATCGAAACAGGGCCAGTGAAGCCAAAAACTGACAGAGCTCGACAGAGCAAGAGACTCGCCAAGAATGGCCTGTGCCTGGAGGTAACTGGGAGGCTGCAGCACGATGACAAGGACCCCCAGAGCTTCCTGGGTGGCAAGACGAAGAAGGGTGATCATCTGGCGTACAGTTCTTTCGGCCAACCCCGTGAAGGGGACGACTTCGACTGCTCCCAAGATTTTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029770