BGIOSGA029784

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Revision as of 09:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029784| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029784, complete gene.| tag = OJ1261_...")
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Gene Name

BGIOSGA029784

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029784, complete gene.

LocusTag

OJ1261_A08.50

Ensembl Transcript ID

BGIOSGA029784-TA

Ensembl Protein ID

BGIOSGA029784-PA

Length

5243

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12910367..12915609

Sequence Coding Region

12915461..12915609,12913769..12913924,12913634..12913700,12913472..12913558,12913238..12913359
,12912765..12912841,12910367..12911721

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12910367..12915609 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12910367..12915609 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCTCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTTGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGCTCTATTGACGATCACCAGAGACCACCTAATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCACGAAACGAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATGTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTGCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCACAGCGATGCTAAAGTGTTGAGAGGCAGCTCCTCAAAATGCGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGA</cdnaseq>

Protein Sequence

<aaseq>MERVEDPDLEDPNPDVGELFSHYDGLYFRGALAGSGFSVQWSSPPSRMAGSFGSCTFGKPDNTITLSETVLKYRSSIDMKNALLHQMIHAILFVKHHRKDCRGHGPIFRAWMTAINTCSIDDHQRPPNGYNITTRHDFSPDKSTRSLSGFLWKCEYCGNTLVRATNIGAPSDACCIENVDNCSTCGNMLCHWHNHKMNCGGTYTKMGTSTSAEVQNNVQGTKRCPTDMKMAKSQRTIRKPESPDSDGLQEKATVTKRKAEGELLALVAGSNVKLTGSNSSKKGVKRHRPEDTQDTNAMLSTPLKNLKLGLDLVSSGKHRVSSIVGSNNTKSSRGSASRKQRKRHSPENVQKSSVLPALSQKKLKLKEDLVVSGKNEPLSLVNCSNGKSAGSNSSKKVSKQHELEGVQKSCVQPASPPRKPRQDLVASVKTEISCLASHSDAKVLRGSSSKCAGNQHEPADIQKSIALPSASESKLKRQNEISSSTKAGMQDKPRGTQKTIDLPASPQTKLKQSVLQKQKRQCGTRKSANEQFAVISAWLNYYESEGSSGSTEPLVNKRTERRRIARNRITCTRSRKQNARGNASIKSQPSEDDSSQAKAAAPCLEIVVSTPSEQVVNQSPGCQSQSPSPYLAIVPFDAAHDMVPLQSADPPGLTDDPTITSGIIDISDDD</aaseq>

Gene Sequence

<dnaseqindica>1..149#1686..1841#1910..1976#2052..2138#2251..2372#2769..2845#3889..5243#ATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCTCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGGTAGGGTCCCTTGCTCAGCTCACTGGCCCTCTCAATCTCTTGCTGAGGGTTTCTTGGAGGAGCTGCATTCTTTTCTGGTCTTTTTTTCTTCTTTTTTAATATATCCAGAAAATTTGCAGTTCATGGGAGGAGTTAGTAGCATCTCGGTGTGATGCTGTGGGAGAAATCTTTGTAGCACACTTGGGGTGTTTTGCTTTCTCTGTGATTCTCTGCACTTGGTGCTGCAGATGCTGCTGCTGCTTTGATTTTTTTGTTCGAATCCCTAGCAAGAGACGGATTGATCATCTCTTCTTTTTCCGGGCGATTTCAGAGGGAGGGAGGGTTTGGTATTCTTGGTTTGTTAGTTCTCCATCCTTCAATCGACATGCTTCAGGGTGTTGGTGATCTTTCACGAAAGGTTTCGTCTTTTTAGAAAAGAAAACGCGAATATTAGGGAAGTAGCCAATATCAAATACTAATTAGAAGGGGTCCTCCTCCTCCTCACTCACGGCGGCGAACCCCCATGGAAGAAGGGAAGTGAGGACGAATGCGAGGGGAGCCAAGAACGGGGAGGAGGATCAACGAGAAGGTGGCGGTGAGGAAGCGAAGAAAAGTGGAGGAGGAGGAAAAAAAAATCGATTTTTCTTAATTTTTTTTTTGGGGGAAGTAGAGGTTTTAATATCAAATACTAATACCCAGGTCATCTATCCCACTACCTTGTGGAGCTACCGGAAGACCCTGGGTGTTTCTAAATTTCGTCTTTTTAGCATTTGGTACTTGAAATGACATAAATGGCGCCGCTTTTGTGCACTTCTTGCTGAGAAGAGCTTCTTGTCTACAAGTAGATCATGCATATTGTAGTTTGCATCGATATAGATTCTTTTTTTTTAGATTGGCACTTTGGGGGGTTAGTACTCAACGGAAACCAGTAATCGCCGGTAGAAAAAAAATGTTTTGGGATGAAAGAGAAGTACATAATCTGTGACCAAGTTCATTCATAACTGTCTCTTGTTAGTGTGCGGGTTTGCTTAATGAGATTTGTGCATGATTTCTAGTAGTACCTACTTTTGGATCACTTAGACGGATAGTAAAGACTAAAAACCTTTAAAAATTAAATCATTAGCAGTTCATTATACTCGGTGAAGTAGGCTGCATTCATTGGGTAGACAATAAGAAGTTTGGTGATGCTTCTAGCATTCTGCTTAATCTGATGGTTGGCCGGGTTGGGTAATGGGTTATGCATGTACAGTACAGAATAGGTTGGGGAGATCATCAGCCAGTGACGTGGATGAAACAGCATGTATCTAAAAGTTTGTGTCAGATAGCATTTCCCCATGATTGATGGCTTCAGTTAATTAAATCCTCCTATCTTCTTGAGAATACAGAACATGCTTCACTATCACATCAGATAAACTTTAGCAAGAGAGGAAAAAAAATGTTGATTTTGGGATTAAAGATGCTTGTTAGTATATAACTATTTTGTTCAATAAATAGCTGCCCTCTGTAAAGATTTATAGGTACATCTTGGGGGAATAACTAGTTTGTTTGTCTATGCAGTTCTTTTGGATCGTGTACCTTTGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGTAAATGTTTGCTTGTGTTAGCTAATAAATCTTGTTACTCTCTGCTTAATTTCAGTGAATTCATGCAGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGCTCTATTGACGATCACCAGGTCAGTCTTTTCTGTAAGATAAGCTATAGTTTGCTGCGCTTCATTGATGATTTCTGAATTCCTTTTTTTCCTCAGAGACCACCTAATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGGTAATTCTGAACTTCTGTCACCTCCTTTCATTTTTTTCTCCCTTTTTGGTGCTAACTTTCTTTTTAACCTTTCAATTATCATAATCTGTTGTGTTCAATTACAACCTTTCAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAAGTAAGACTCAATAGTTTTAGAATATAGAATAGTACCAAAACAATGCACAGACAAAAGTATGAGCTCAATCTATTTGAGTCTTGTTTGAAAAATATATGTGCACTGTTCATTCTTCGTTTTGTTCTCTCTTAAGAAATCACAAGTGAAAAGCAGACCAATAAAACTGGGGAAACTGGATGCATATTTGATTTTGGAAATTTCAACTCAAAACTGATCACTAAATGCACATACCTGATGCGTGTTATTGTGAATATATCAAAATCATCTATGTTTGAGCATTCTAAATATAACAAATCATCTATGCTTGAGCATTCTAAATAACTTTAATTTTCAGCAAATGTTTGCAGCAGTTGATTGCAAAGATCTGTTATTGACTCAATATGCTATTTTCTGCAGCCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTAATGTTCAAATTTACATGGTATCTCCTTCTGTTTATCAGCAGTGAACTAACCGTTGAAGAGTATGGAAGCCAAGATCAGCTCATGTGCTTCATATATTTCTCTCTTTTCTACCCCATTCGTTTCATATTTTTTTTGAAAGGACCCATTCGTTTTATATTATAAGTCGTTTTGAGTTTGACCAAGTTTATAAAAAATATATAGTAGCTTTTCTAATACAAAACAAACATTGTATCAAAATATATTCAATGCTAAATTTAATAAAACTAATTTGGTGTTTTATATATTGCTAATTTTTTCTATAATTTTGGTCAAACCTAAAAAACTTTGATCAAGAAAAAAGTCAAACGACTTATAATATGAAACGGAGGGAGTAATAGTTTATCCACCCAAACCAGTTACGCTCAATTCAACTACAAAATTATGTGTTTTGGAACAAAAATCAGATAGTCCTGTTTATATTGAAAGCAACAGCATTTATACAGTGATACAGAGGATACCAGTGTCCAAAGTACTACCAGAATAGAAATAAGCAAAATGACATGTAGGTTCGCAGTTTTCTATTACACTTTATTTTCCCAATCCACTCCACTTGTCTTGACTCTTGAGCTGAAACTTTGTTGGTTAAAAATCTTGGCATCAAGAAGCTTGATCTTCATTTCAAGTCTGCCTGCATCATTTGATCACTCAAACAATCGCCGATTATGTAGCAAGTAGCAATAGAAGGCTTCAATAAAGCCACCCACGGTGATGGAAATAACTAGTAGCGAAGTTGTGCAACAATAATTATTTCTACATGAGGAACTCGGGTTTGGCCCTTTCCCTGCACAACATAGTAGATCATAATAATGCCTTGCCACAGTTGAATTGATTATTTTAGGCTTGTCATTCTGTGAATTGTGGTAATCCCACCATTTATGTAATGTGGCATTCCCCAATTAGAATGTAGACTTTAAAATGATATCAAAATATCAGTTTTGTTATACCTATCTCTTTTGTTCTTATCATTAAAGTACATGTTACCAACCTTATAGTTTCTCCAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCACGAAACGAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATGTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTGCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCACAGCGATGCTAAAGTGTTGAGAGGCAGCTCCTCAAAATGCGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029784