Os09g0103200

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Revision as of 07:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0103200| Description = Conserved hypothetical protein| Version = NM_001069088.1 GI:115477915 GeneID:4346370| Length = 4754 bp| Definition ...")
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Gene Name

Os09g0103200

Description

Conserved hypothetical protein

Version

NM_001069088.1 GI:115477915 GeneID:4346370

Length

4754 bp

Definition

Oryza sativa Japonica Group Os09g0103200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:369009..373762

Sequence Coding Region

370494..370497,370893..370980,371087..371161,371558..371591,371659..373132
,373374..373390

Expression

GEO Profiles:Os09g0103200

Genome Context

<gbrowseImage1> name=NC_008402:369009..373762 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:369009..373762 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtattctgagactgatttctctttcaaggatgccaacaaactgtgctctcttattcggaagcagcaagcccttgccaaaaagaaaaggaaatggctgcggtctctgattccaagggaagacggtctcatcaaacctatcaaacgacccaagtttctaaaagatgtgtacttggctgaatcatatgtaaggagtgatgaggtttcttgtgagaaagtcatagcccatgttgaaaaatgttatggtttccaaagcgatggctacagccaccacattgttcaggatggcctccagctttttaagttgcaaaaaggcaaggatggctcactcagtccacaaggtcttgcagacatgcaactcataataaataagttaagcaatgaagcacttcattcagtggctaacatcgccacccacaatagggttagttttgagaagaccaggccagcgatgaaaaagatcatagaagaccacctaccacaatacttggcaaacttgcatgatgaaaatgacatgtctcagctgtcgcacattttaacaaatccattcagttaccgatctaattccttaaacattacaacacctatttcaccgaaaatgctatcatccatcgaccaggcattaaatgtactcagtacactgactatacaagctcttgttgcaatgaaaaggaagcttgatgaagtatctttcaccccaaaatttagttttgtacctcgtataagcagaaaggcgcatatggttactgtgattaggaaagagtgcaataagatgatttcaagggttggggaaagtggtgacctgccaaagaatttggcaaaagcactgtcagtggtgaatctgtataggaagcaagagttgaaatgcatggacatctcacaggcagagttctttccattctcaaaaaaagcaattttcttgcaaaatgatgtcctgaatgctatttggtcaattcaaaagttgaagaaaggggatcttaaattgctgcgtgccatactatgtcaaggttcaaacgatgagatgctgctaaagactactgtgagaaggtatttgatagattgtttgtttgaatgtgatgagggtgatttaccagatgaggcactgagagccattgctttgtgcaatcagatgccgctgcgtcaaaaaattgatttcacagaacaaaggaagggtgcagagttagaagctgtactgaatgtaagcagtagtcttagagctctagtatatcattgtacaggaggccaaactgatgatcagttaatgaactgtgagagtgaatgccacagcgatgaacaagtgatgagcttaggttgtgatgactacagttgtgataatgatttcgtgctcacagagggttacaaaaattttggtcatcagcagcataaaatagatgaagcttgttcgagtagcatggtcaaccctgtcagtgtgagtggacatttctcgagtggagctggtagtaatatgaagaaacctactttgcatgaggttgttggtgccaatgaagtggaaataagaagaagctccatgggcctttccgagatttgtgatgatgctgcaattttggcccacaagcttctagggaaaattctggacaacacgttgcttgcagaaaacaaggtcaatggacttgccggatactctcttgatggttctacttcgcatggtcctcaagctgcatggacaaagtga</cdnaseq>

Protein Sequence

<aaseq>MYSETDFSFKDANKLCSLIRKQQALAKKKRKWLRSLIPREDGLI KPIKRPKFLKDVYLAESYVRSDEVSCEKVIAHVEKCYGFQSDGYSHHIVQDGLQLFKL QKGKDGSLSPQGLADMQLIINKLSNEALHSVANIATHNRVSFEKTRPAMKKIIEDHLP QYLANLHDENDMSQLSHILTNPFSYRSNSLNITTPISPKMLSSIDQALNVLSTLTIQA LVAMKRKLDEVSFTPKFSFVPRISRKAHMVTVIRKECNKMISRVGESGDLPKNLAKAL SVVNLYRKQELKCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILC QGSNDEMLLKTTVRRYLIDCLFECDEGDLPDEALRAIALCNQMPLRQKIDFTEQRKGA ELEAVLNVSSSLRALVYHCTGGQTDDQLMNCESECHSDEQVMSLGCDDYSCDNDFVLT EGYKNFGHQQHKIDEACSSSMVNPVSVSGHFSSGAGSNMKKPTLHEVVGANEVEIRRS SMGLSEICDDAAILAHKLLGKILDNTLLAENKVNGLAGYSLDGSTSHGPQAAWTK</aaseq>

Gene Sequence

<dnaseqindica>1486..1489#1885..1972#2079..2153#2550..2583#2651..4124#4366..4382#agcggcaacacaaaccaaaccctagcgtgggaagcggcggcgaccgggcgacggcaagcggcggcgacgtgagcagggttggccaccaacggcggagcgacgcgcgagtgctgcgggctgcggcgagcggaaggcggcgcaccacgcgcgggctgcggcggcaggccggcgagtgtgactgggattgggctgttgggcgagctcggctgacgtaagtgaattgttcatttgttctagtattattgagttatccaaatttcacactgaggatttcattttggtaagtataacttgtacttgtgcaatggcttagtgtatatataccaggatttagcgaacttgtgcaatggctttgatgcccatttttttggtatttaagcacgtgcaaacttttaattacgaatgtgagcacataatttttggatttttgtttctaagcaatatgcctacgtgaccatgttgatccggttgacctgatgttgatcaaaacaaatgggttgtttgtttaactaaatgtccaagagattaatgtgattttcgctgctttgttactagcagtaacgtgcaggaatcatcagccttgataactctcttcattgccagccaatagcaatagtgcagctgccttactatatttagattacactgaaaaatgtatatgctacaatggtttgtaaaagctgatcgatatgcaacactgatatgcaaaacaaatgaagattactaattagcacaaattatgattttgatgatccttgcggatgaattagatttgaattgtagaaaaaatgttgcacctactatgttgttctgatttctaaaacaaaagccaacgggccaattggaggtaggctgttggtatatacgtatacgtatgtactcatcaattcagcacccaattagtttgttcacatcagttcaatagaatcagcactcaaagagcatcctgcctacaaatttaaatgtgtgtttgtactgtttggcgtgcttgtatttggacacaccggtgttgcatgtgcttactttgatgcaatgacttaatttatgagaatataagtacagtcggctattaaattaggctcaattttgtgttatatatgctatatatcgtacaaccattagtgcttaatgttataccagccaattatagtttcttttgggtgtaaaaaaaatattttttacccttcacatttcgaatacccaacctctaaatcctgggtcaacccctgcacaatgcgcccgtgctgccttcccttgctctttgcccttcaaccccccattcgcgccttttctagcaggtaccttcattcctctagctcatagtttcattgttaacagctctcattgtatttgaaccataaactatgaaacatttgtcgttaccaattcttaaattactgaatttgtgattgctgattagtgaatgtgccattgtagttgatgaagctcccctaattgaagaaccaccaacagttgccatagtcgatgtgtaagacctgttctacttgaaccatctatattataacatttgcacattttgaacctagcttgttaagttagtcgattattataagatattattgctatatttgtcgccttttttaactaaatttgtacttccatatgggatttacgatgttcggaacttttgttatgtgatgtgaactttgttttgaaatttgatttgaaagttaaaaagtatactcaaatttaccaacgatggtagacatgtatgctatatgcacgcatgcatgcagttcagcaaattgcaaattagcaactactcctaattaactactttgctcaacagcatttatgtaggctggtttctcttttctaataatttgccattttatcttttgtactttactgttgcttttacagattctgagactgatttctctttcaaggatgccaacaaactgtgctctcttattcggaagcagcaagcccttgccaaaaagaaaaggaagtatgtatatttctcttctattactatctaagataaccctgttcttttgtttttatcattcttgatccagattcagtattcttgtgctaatacctttttttggcagatggctgcggtctctgattccaagggaagacggtctcatcaaacctatcaaacgacccaagtttctaaaagatgtgtaagtgcaccatttgcaccattcttggggtttcaaattgtactgaatggaagcttgctatctactaacatgatcatgtcttgtaaacaaatggtctatttgttgctcatttcaaaatattgaattgttttgtaatttcacaccatgggtacttttatgctttatgaacataaatggatgatcaggtggcatttcgagatatgtctttatgtattcatctttgtcatttgatggcttgcaaatcacttcatgtgcagaaaatgatgctaacttataggtcacaccagtttgaaggcagctaacttctttacattgtcttttaatgctattaagtttctattattagtttgtcgtaacaaaacaaaaatcttattattagatttctctgctttgcaggtacttggctgaatcatatgtaaggagtgatgaggtaagtcatcacattgttcttatccagtgattacatccagcacattgtcttacttgaatctctctaggtttcttgtgagaaagtcatagcccatgttgaaaaatgttatggtttccaaagcgatggctacagccaccacattgttcaggatggcctccagctttttaagttgcaaaaaggcaaggatggctcactcagtccacaaggtcttgcagacatgcaactcataataaataagttaagcaatgaagcacttcattcagtggctaacatcgccacccacaatagggttagttttgagaagaccaggccagcgatgaaaaagatcatagaagaccacctaccacaatacttggcaaacttgcatgatgaaaatgacatgtctcagctgtcgcacattttaacaaatccattcagttaccgatctaattccttaaacattacaacacctatttcaccgaaaatgctatcatccatcgaccaggcattaaatgtactcagtacactgactatacaagctcttgttgcaatgaaaaggaagcttgatgaagtatctttcaccccaaaatttagttttgtacctcgtataagcagaaaggcgcatatggttactgtgattaggaaagagtgcaataagatgatttcaagggttggggaaagtggtgacctgccaaagaatttggcaaaagcactgtcagtggtgaatctgtataggaagcaagagttgaaatgcatggacatctcacaggcagagttctttccattctcaaaaaaagcaattttcttgcaaaatgatgtcctgaatgctatttggtcaattcaaaagttgaagaaaggggatcttaaattgctgcgtgccatactatgtcaaggttcaaacgatgagatgctgctaaagactactgtgagaaggtatttgatagattgtttgtttgaatgtgatgagggtgatttaccagatgaggcactgagagccattgctttgtgcaatcagatgccgctgcgtcaaaaaattgatttcacagaacaaaggaagggtgcagagttagaagctgtactgaatgtaagcagtagtcttagagctctagtatatcattgtacaggaggccaaactgatgatcagttaatgaactgtgagagtgaatgccacagcgatgaacaagtgatgagcttaggttgtgatgactacagttgtgataatgatttcgtgctcacagagggttacaaaaattttggtcatcagcagcataaaatagatgaagcttgttcgagtagcatggtcaaccctgtcagtgtgagtggacatttctcgagtggagctggtagtaatatgaagaaacctactttgcatgaggttgttggtgccaatgaagtggaaataagaagaagctccatgggcctttccgagatttgtgatgatgctgcaattttggcccacaagcttctagggaaaattctggacaacacgttgcttgcagaaaacaaggtcaatggacttgccggatactctcttgatggttctacttcgcatggtcctcaaggtacattttggaccaccattgaaccttcattgtttttgttttggtcttgttttgttttagtttgcaatgcccttcaaggttcatatgatatatttgccatagatcctgcagaaaagaaccaaaaagctgacattgtgattaaagctattgagaatgtcttaccgaatctgccaaaaaggtcctttttttccctccaccccttcattgcatataaacacactaatactatatgtttgtgcagctgcatggacaaagtgaggaggatgttgcatgatgataaacaatgagtatggtctgcaaaaataatgtatgggctctatttcttaagttccatattatagttattgactctgtattgcctaatttccgcattccatttgcaaattctttttaggtccttgacctattgtgtttgttgttgcctgccttttgacattctgcacaggcttgtttggtgccaatcagttcactcaaatgagactcaatggtgttgccttttgaagagcagatggtagtctgattgaaatggaactgcttgttcatatatatgtcaccattttcttttggttgaacctgttaatgttacacttatgatacatatactactatccaacatcattataacctcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0103200, RefSeq:Os09g0103200