Os10g0545200

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0545200| Description = Similar to 4,4-dimethyl-sterol C4-methyl-oxidase (Fragment)| Version = NM_001071741.1 GI:115483225 GeneID:4349278| L...")
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Gene Name

Os10g0545200

Description

Similar to 4,4-dimethyl-sterol C4-methyl-oxidase (Fragment)

Version

NM_001071741.1 GI:115483225 GeneID:4349278

Length

2884 bp

Definition

Oryza sativa Japonica Group Os10g0545200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21763733..21766616

Sequence Coding Region

21763854..21764183,21764553..21764875,21765892..21766039,21766134..21766166,21766334..21766405

Expression

GEO Profiles:Os10g0545200

Genome Context

<gbrowseImage1> name=NC_008403:21763733..21766616 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21763733..21766616 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccctacgcgacggcggcggaggcggaggcggcgctggggagggcgatgacggcggcggagtcgctgtggttcaggtactcggcggggatcccggactacgtcctcttctggcacaacatcctcttcctcttcgtcgtcttcacgctcgcgccgctccccgtcgcgctcctcgagctccgcgcgccggccgccgtggggccgttcaagctgcagcccaaggtgcggctctcccgggaggagttcttccgctgctacagggacgtcatgcgcctcttcttcctcgtcatcggcccgctccagctcgtgtcctaccctaccgtcaagatggtgggaatccacacagggctgccactgccgtcgctgggggagatggcggcgcagctgctggtgtacttcctggttgaggactacctcaactactggatccatcggttgctacatggggagtggggctatgagaagatccaccgtgtccaccatgagttcacggcacccattggattcgccgcgccatatgcacactgggctgaggtgctcatcctcggcatcccctcctttgtcgggccagcgcttgcacctggtcacatgatcaccttctggctctggattgtactccgccagatggaggccatagagacacacagcggctttgatttcccgttcaacctgacaaagtatattccattctatggaggcgcagaataccatgattatcatcactatgttggacgccagagtcagagcaatttcgcttctgttttcacgtattgtgattatctatatggaaccgacaaaggttacagataccataaggcgtaccaagcaaagatgaaggctctggggcaaacggaaggcgagaaagcagatagcaatggattgagctacgcgaagttggattaa</cdnaseq>

Protein Sequence

<aaseq>MLPYATAAEAEAALGRAMTAAESLWFRYSAGIPDYVLFWHNILF LFVVFTLAPLPVALLELRAPAAVGPFKLQPKVRLSREEFFRCYRDVMRLFFLVIGPLQ LVSYPTVKMVGIHTGLPLPSLGEMAAQLLVYFLVEDYLNYWIHRLLHGEWGYEKIHRV HHEFTAPIGFAAPYAHWAEVLILGIPSFVGPALAPGHMITFWLWIVLRQMEAIETHSG FDFPFNLTKYIPFYGGAEYHDYHHYVGRQSQSNFASVFTYCDYLYGTDKGYRYHKAYQ AKMKALGQTEGEKADSNGLSYAKLD</aaseq>

Gene Sequence

<dnaseqindica>122..451#821..1143#2160..2307#2402..2434#2602..2673#gtggacgacgacgcgaggccactcgaagcggcattttgcacctaaccccctagagttatcgggaatcgcaaagagggggccatctcgagtggctcgccggcggcggcggaggcggggagagatgctgccctacgcgacggcggcggaggcggaggcggcgctggggagggcgatgacggcggcggagtcgctgtggttcaggtactcggcggggatcccggactacgtcctcttctggcacaacatcctcttcctcttcgtcgtcttcacgctcgcgccgctccccgtcgcgctcctcgagctccgcgcgccggccgccgtggggccgttcaagctgcagcccaaggtgcggctctcccgggaggagttcttccgctgctacagggacgtcatgcgcctcttcttcctcgtcatcggcccgctccagctcgtgtcctaccctaccgtcaaggtgcgtttcctcttctttttttttctgcggctctcgtcgatgaatccgcgcaatgctgtgccgcggggattagattcgaaggaagaacgcgacatttggttactacgcgtatgcggcgcttagaatttggatttgtaagatggtgggtgatccatcagttcgagattgcgagatttgaagggatttgtgatccgggaacccttgtgagatgcaatcacatgatctaaggtcgtcttgatgatattttaatactcttaagtaaaagaagattgttccttttatatcatttactattatttatatgtggtgcattattatagtagttctagagatcaaataaagaagataggtcgtttttgaacattgcagatggtgggaatccacacagggctgccactgccgtcgctgggggagatggcggcgcagctgctggtgtacttcctggttgaggactacctcaactactggatccatcggttgctacatggggagtggggctatgagaagatccaccgtgtccaccatgagttcacggcacccattggattcgccgcgccatatgcacactgggctgaggtgctcatcctcggcatcccctcctttgtcgggccagcgcttgcacctggtcacatgatcaccttctggctctggattgtactccgccagatggaggccatagagacacacagcgggtaaggaaactttgtacttccccccttctttggattgtttggaggatgcataatttatcacgtaatataagtctaacgatgtgcacagcattgtgttgacttggcaagtatttggatttgttgctagtgatggatggatatgttgtggatagatttagtgggtgattgcaaatctagctgcatggcattttgatttgttagtgataaatggatttttggacagagggtttgtttccaattggaagcttggaacataggatacaggtacctatgttgatgcatttggagttattgaacagaaaaggtttacctagaaataggatgcttttatctactatttccagaataatgctagaatagactacagaccatggttcagcattcgctgcagctttttagtagaaagaaatttaagtagcaaatgagtaaccttgttcaattttgcaactacactttcaattcattaaagttgattagactaattaatttgagaaaaaagtgcatttgtgattttaattacaaaattatacaactctaagcaatctggagtgtaatgattgatattagttttttttaagcagcttgtcaaatttaaatagatatgcatatttactagtgtatatgatactatgctagacatggagaactagcaacaatgcaagattactagactgttttgggtctgatccattgtttttctgcaagtgttcactcataaaattgtagtatgtgaccatggatgatatagaagcaattaagttgcttgaactttaacttaaaaggatggaaagccgccaaccccttttctaaaataaataaaaagacatgtatatgctttggtcatatcaatattgtgtcagtgtcaactcataaaacttgagtatcatgaccatactttttgccgtattccccatcactttgctattgcactgaccaaatgatatcgcccatcacattgctgttgcactcgtgtagtgtttacatggcataacaaaattatcttgttatttttgcagctttgatttcccgttcaacctgacaaagtatattccattctatggaggcgcagaataccatgattatcatcactatgttggacgccagagtcagagcaatttcgcttctgttttcacgtattgtgattatctatatggaaccgacaaagtaagtatctgcttttacacaatgcaactgtttaaacccacccacccccaacacacaagaacgacatatttatgttgtgctcttgttttttcagggttacagataccataaggcgtaccaagcaaaggtagttttctttttgcactgttgctatctccggtcattttctatgcttcaattccagagaattttcagtttgtacaattgttatgtgtcaaatgggcaactcagttgacagagtagctgaccttttttttttttcgttctctcttcctgtttccttggatgaaacagatgaaggctctggggcaaacggaaggcgagaaagcagatagcaatggattgagctacgcgaagttggattaaactgtcctatatatagccaaaatctggaatgcctccctggtcattttgttcgttacggcttgtgtagtgttttgattttgtttcgatttctgtagtagtgtcgtgctgctgtgccttttgtttttgtggctgtgacttgtgagcatccatggaacttgttacgctgaccaataacattgtgactcgggtagtctttatgtggtttgcgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0545200, RefSeq:Os10g0545200