BGIOSGA029860

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Revision as of 09:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029860| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029860, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA029860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029860, complete gene.

LocusTag

OSJNBA0041C07.40

Ensembl Transcript ID

BGIOSGA029860-TA

Ensembl Protein ID

BGIOSGA029860-PA

Length

3285

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11202306..11205590

Sequence Coding Region

11202306..11205590

Genome Context

<gbrowseImage1> name=IndicaChromosome09:11202306..11205590 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:11202306..11205590 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGAGATCAATTACTCAATATCCAATCAGATGTTCATAAGTTATGGGAGGAGGGCAAGGTTTTTGAGGCTGAACCTGGGAGTAAGCCACCAGGCCCTGGGGAAAAATTCTTTGGCAATTTTCCATACCCTTACATGAACGGCTTGCTACATTTGGGCCATGCCTTCTCATTGTCCAAGCTTGAGTTTGGTGCTGCATACCATAGACTCCGTGGCTCAAATGTCCTTTTGCCTTTTGCTTTCCATTGTACGGGAATGCCCATCAAGGCCTCAGCAGATAAACTGTCAAGGGAGGCTCAACAATATGGATATCCTCCTGTGTTTCCTGAATTGGACTCAAGTATTGAAGTTGCTGATGATAGCCAGCCTGACCAGGGGGTTTCTGTTGCCCCAGATAAATTTAAGAGCAAGAAATCTAAGGCTGCTTCAAAGGTTGGCTTACAGAAGTTTCAGTGGGAGATCATGAGGGGGTTTGGATTGTCAGATGAAGAAATTGCTAAATTTCGGGACCCTTACCACTGGTTATCTTACTTCCCTCCATTGGCAATGGAGGACCTCAAGGCCTTTGGCCTGGGTTGTGATTGGAGGAGGTCGTTCATAACTACTGACATGAACCCATTCTATGATGCTTTTGTCCGGTGGCAGATGAGAAAGCTGAAGAAAATGGGCAAGGTTGTCAAAGATATGAGGTACACAATCTACTCTCCATTGGATGGCCAACCTTGTGCTGACCATGATCGAGCTTCAGGTGAAGGTGTACAGCCTCAGGAGTATGTGTTAATTAAAATGGAGGTGGTTCCACCTTTCCCACCCAACTTGAAGGCCTTGGAAGGAAGGAAAGTTTATTTGGCAGCAGCTACCTTAAGACCCGAGACGATGTATGGGCAGACAAACTGTTGGGTATTACCTGATGGAAAATATGGTGCTTTTGAGATCAATGACACCGATGTCTTCGTTCTGACATCAAGGGCCGCCCTTAATCTTGCATACCAGGGTCTATCTAAGGTCCCAGAGAAGCCAACTTGCTTAGCTGAGCTATCTGGCAATGATCTGATTGGTTTGCCCTTAAAGTCCCCTCTTTCTTTTCATGACGTTATATACGCACTTCCCATGCTCACTATCTTGACAGACAAAGGCACTGGCATTGTGACTAGTGTGCCAAGTGATTCTCCAGATGATTTCATGGCACTACAAGATTTAGTATCAAAGCCAGCTTTGAGACAAAAGTTTGGAGTCAAAGATGAGTGGGTTCTTCCATTTAAGATTATACCAATAATCAATATTCCTGAATTTGGAGATAAGTCAGCTGAGAAGGTGTGCCTTGATCTCAAGATTAAAAGCCAGAATGACAAGGAGAAACTTGCGGAAGCTAAAAGGATGACATATCTCAAAGGTTTTACTGATGGAACAATGATTGTAGGGGAGTTCAATGGGAGAAAGGTTCAAGAAGCAAAGCCACTGATAAAGAAGCAGCTTTTGGAAGAAGGCACAGCGGTGCTGTATAGCGAGCCTGAGAAGAAAGTCATGTCAAGATCTGGTGATGAGTGTGTTGTTGCTCTCACAGATCAGTGGTACATTACTTATGGTGAGACTGAATGGAAGCAGAAGGCAGTCAAATGTTTGGAGAAGATGAATACATTCTCGGCAGAAACCCGTAATGGTTTTGAACACACATTAGGCTGGCTGAATCAGTGGGCTTGCTCTCGGTCTTTTGGCCTAGGTACTCGCATTCCATGGGATGAGCAGTTCCTCGTGGAATCTCTTTCTGATTCCACCCTCTATATGGCATATTACACAATTGCTCATCTTTTGCAAAATGGTAACATGTATGGTAAGGAAATATTTTCTATTAGACCAGAACAAATGACAGATGAAGTTTGGGACTATGTGTTCTGTGATGGTCTGGCACCTACTACTGACATACCTCCAGCTCTCTTGAGTAAAATGAAGCAAGAATTCGAGTATTGGTATCCCTTTGATATTCGGGTGTCTGGCAAGGATCTTATCCAAAACCATCTGACATTCAGCATTTACAACCATACAGCACTTCTTCCGGAGCATCATTGGCCCCGTGGCTTCCGTTGCAATGGGCATCTTATGCTTAATTCTGAGAAGATGTCCAAGTCCACAGGGAATTTCCGTACTCTTCGGCAGGCCATTGAAGAATTCTCTTCTGATGCCACTAGGTTTGCCCTTGCTGATGCTGGTGATGGTATGGATGATGCCAATTTTGTCTTTGAAACAGCAAATGCTGCTATTTTGAGGCTTACCAAAGAAATTGCATGGATGGAAGAGGTTATAGCTGCTGAATCTTCCCTTAGAACTGGACCTCCCTCTACTTATGCTGACCATGTGTTTGCTAATGAGATTAACATTGCGGTGATCGAAACTGAGAAGAGCTACAATGCCTTCATGTTCAGAGATGCCCTTAAGTTGGGGTTCTATGACTTACAATTGGCTAGAGACGAGTACAGACTTTCTTGTGGAGCAGCAGGCATGAATCGTGATTTGTTGTGGCGGTTTATGGAAGTTCAGACTAGGCTTATCACCCCCATTTGCCCACACTATGCTGAGCATGTGTGGCAAAAGATCCTGAGGAAGGAAGGCTTTGCAATAAAAGCAGGCTGGCCAGTTGCAGGAAGCCCAGATCCTACTCTAAGAATTGCAAACAAATATTTACAGGACTCTATAGTTAAATTCAGGAAGCTGCTCCAGAAGCAAGAATCCGGTTCCAAGAAGCCCAAGAAGGGAGCTGCTGCACCTCCTCCATCTGAGGAAAACAAGCTGACTGTTGGTCTGATCTATGTTAATGAACACTATTATGGATGGAAAGAGCAATGTCTGAGGGTGCTCCAGTCTAAATTTGACAGCCAAGCTCGGTCCTTCGCCCCTGATGAGGAGATTACTGAAGCACTGAAGAATTGCTCCATCGGGCAGGAAACTAATTTCAAACAAGTCCAGAAGCTCTGCATGCCTTTCATCAAGTCGAAAAAGGATGAGGCCAAGAGTGTTGGGCCCCATGCTTTAAATCTGAAGCTTCCATTTGGTGAAATGAATGTTCTCGAGGAGAATTTGGAGTTGATCAAGAGGCAGGTAGGCCTTGACCATGTAGAGGTCTTGTCAGCTTCTGATGAAGCAACTCGTGCTAAGGCTGGTGCTCATGTTTCAATGTTGGACAAGACCCCGCCTTCTCCTGGTGAACCAGTAGCAATCTTCATCAGCAAGCAGGAGTTTGAAGCCCAGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MSSNPDGGRSFARRDQLLNIQSDVHKLWEEGKVFEAEPGSKPPGPGEKFFGNFPYPYMNGLLHLGHAFSLSKLEFGAAYHRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPVFPELDSSIEVADDSQPDQGVSVAPDKFKSKKSKAASKVGLQKFQWEIMRGFGLSDEEIAKFRDPYHWLSYFPPLAMEDLKAFGLGCDWRRSFITTDMNPFYDAFVRWQMRKLKKMGKVVKDMRYTIYSPLDGQPCADHDRASGEGVQPQEYVLIKMEVVPPFPPNLKALEGRKVYLAAATLRPETMYGQTNCWVLPDGKYGAFEINDTDVFVLTSRAALNLAYQGLSKVPEKPTCLAELSGNDLIGLPLKSPLSFHDVIYALPMLTILTDKGTGIVTSVPSDSPDDFMALQDLVSKPALRQKFGVKDEWVLPFKIIPIINIPEFGDKSAEKVCLDLKIKSQNDKEKLAEAKRMTYLKGFTDGTMIVGEFNGRKVQEAKPLIKKQLLEEGTAVLYSEPEKKVMSRSGDECVVALTDQWYITYGETEWKQKAVKCLEKMNTFSAETRNGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVESLSDSTLYMAYYTIAHLLQNGNMYGKEIFSIRPEQMTDEVWDYVFCDGLAPTTDIPPALLSKMKQEFEYWYPFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLRQAIEEFSSDATRFALADAGDGMDDANFVFETANAAILRLTKEIAWMEEVIAAESSLRTGPPSTYADHVFANEINIAVIETEKSYNAFMFRDALKLGFYDLQLARDEYRLSCGAAGMNRDLLWRFMEVQTRLITPICPHYAEHVWQKILRKEGFAIKAGWPVAGSPDPTLRIANKYLQDSIVKFRKLLQKQESGSKKPKKGAAAPPPSEENKLTVGLIYVNEHYYGWKEQCLRVLQSKFDSQARSFAPDEEITEALKNCSIGQETNFKQVQKLCMPFIKSKKDEAKSVGPHALNLKLPFGEMNVLEENLELIKRQVGLDHVEVLSASDEATRAKAGAHVSMLDKTPPSPGEPVAIFISKQEFEAQH</aaseq>

Gene Sequence

<dnaseqindica>1..3285#ATGTCGTCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGAGATCAATTACTCAATATCCAATCAGATGTTCATAAGTTATGGGAGGAGGGCAAGGTTTTTGAGGCTGAACCTGGGAGTAAGCCACCAGGCCCTGGGGAAAAATTCTTTGGCAATTTTCCATACCCTTACATGAACGGCTTGCTACATTTGGGCCATGCCTTCTCATTGTCCAAGCTTGAGTTTGGTGCTGCATACCATAGACTCCGTGGCTCAAATGTCCTTTTGCCTTTTGCTTTCCATTGTACGGGAATGCCCATCAAGGCCTCAGCAGATAAACTGTCAAGGGAGGCTCAACAATATGGATATCCTCCTGTGTTTCCTGAATTGGACTCAAGTATTGAAGTTGCTGATGATAGCCAGCCTGACCAGGGGGTTTCTGTTGCCCCAGATAAATTTAAGAGCAAGAAATCTAAGGCTGCTTCAAAGGTTGGCTTACAGAAGTTTCAGTGGGAGATCATGAGGGGGTTTGGATTGTCAGATGAAGAAATTGCTAAATTTCGGGACCCTTACCACTGGTTATCTTACTTCCCTCCATTGGCAATGGAGGACCTCAAGGCCTTTGGCCTGGGTTGTGATTGGAGGAGGTCGTTCATAACTACTGACATGAACCCATTCTATGATGCTTTTGTCCGGTGGCAGATGAGAAAGCTGAAGAAAATGGGCAAGGTTGTCAAAGATATGAGGTACACAATCTACTCTCCATTGGATGGCCAACCTTGTGCTGACCATGATCGAGCTTCAGGTGAAGGTGTACAGCCTCAGGAGTATGTGTTAATTAAAATGGAGGTGGTTCCACCTTTCCCACCCAACTTGAAGGCCTTGGAAGGAAGGAAAGTTTATTTGGCAGCAGCTACCTTAAGACCCGAGACGATGTATGGGCAGACAAACTGTTGGGTATTACCTGATGGAAAATATGGTGCTTTTGAGATCAATGACACCGATGTCTTCGTTCTGACATCAAGGGCCGCCCTTAATCTTGCATACCAGGGTCTATCTAAGGTCCCAGAGAAGCCAACTTGCTTAGCTGAGCTATCTGGCAATGATCTGATTGGTTTGCCCTTAAAGTCCCCTCTTTCTTTTCATGACGTTATATACGCACTTCCCATGCTCACTATCTTGACAGACAAAGGCACTGGCATTGTGACTAGTGTGCCAAGTGATTCTCCAGATGATTTCATGGCACTACAAGATTTAGTATCAAAGCCAGCTTTGAGACAAAAGTTTGGAGTCAAAGATGAGTGGGTTCTTCCATTTAAGATTATACCAATAATCAATATTCCTGAATTTGGAGATAAGTCAGCTGAGAAGGTGTGCCTTGATCTCAAGATTAAAAGCCAGAATGACAAGGAGAAACTTGCGGAAGCTAAAAGGATGACATATCTCAAAGGTTTTACTGATGGAACAATGATTGTAGGGGAGTTCAATGGGAGAAAGGTTCAAGAAGCAAAGCCACTGATAAAGAAGCAGCTTTTGGAAGAAGGCACAGCGGTGCTGTATAGCGAGCCTGAGAAGAAAGTCATGTCAAGATCTGGTGATGAGTGTGTTGTTGCTCTCACAGATCAGTGGTACATTACTTATGGTGAGACTGAATGGAAGCAGAAGGCAGTCAAATGTTTGGAGAAGATGAATACATTCTCGGCAGAAACCCGTAATGGTTTTGAACACACATTAGGCTGGCTGAATCAGTGGGCTTGCTCTCGGTCTTTTGGCCTAGGTACTCGCATTCCATGGGATGAGCAGTTCCTCGTGGAATCTCTTTCTGATTCCACCCTCTATATGGCATATTACACAATTGCTCATCTTTTGCAAAATGGTAACATGTATGGTAAGGAAATATTTTCTATTAGACCAGAACAAATGACAGATGAAGTTTGGGACTATGTGTTCTGTGATGGTCTGGCACCTACTACTGACATACCTCCAGCTCTCTTGAGTAAAATGAAGCAAGAATTCGAGTATTGGTATCCCTTTGATATTCGGGTGTCTGGCAAGGATCTTATCCAAAACCATCTGACATTCAGCATTTACAACCATACAGCACTTCTTCCGGAGCATCATTGGCCCCGTGGCTTCCGTTGCAATGGGCATCTTATGCTTAATTCTGAGAAGATGTCCAAGTCCACAGGGAATTTCCGTACTCTTCGGCAGGCCATTGAAGAATTCTCTTCTGATGCCACTAGGTTTGCCCTTGCTGATGCTGGTGATGGTATGGATGATGCCAATTTTGTCTTTGAAACAGCAAATGCTGCTATTTTGAGGCTTACCAAAGAAATTGCATGGATGGAAGAGGTTATAGCTGCTGAATCTTCCCTTAGAACTGGACCTCCCTCTACTTATGCTGACCATGTGTTTGCTAATGAGATTAACATTGCGGTGATCGAAACTGAGAAGAGCTACAATGCCTTCATGTTCAGAGATGCCCTTAAGTTGGGGTTCTATGACTTACAATTGGCTAGAGACGAGTACAGACTTTCTTGTGGAGCAGCAGGCATGAATCGTGATTTGTTGTGGCGGTTTATGGAAGTTCAGACTAGGCTTATCACCCCCATTTGCCCACACTATGCTGAGCATGTGTGGCAAAAGATCCTGAGGAAGGAAGGCTTTGCAATAAAAGCAGGCTGGCCAGTTGCAGGAAGCCCAGATCCTACTCTAAGAATTGCAAACAAATATTTACAGGACTCTATAGTTAAATTCAGGAAGCTGCTCCAGAAGCAAGAATCCGGTTCCAAGAAGCCCAAGAAGGGAGCTGCTGCACCTCCTCCATCTGAGGAAAACAAGCTGACTGTTGGTCTGATCTATGTTAATGAACACTATTATGGATGGAAAGAGCAATGTCTGAGGGTGCTCCAGTCTAAATTTGACAGCCAAGCTCGGTCCTTCGCCCCTGATGAGGAGATTACTGAAGCACTGAAGAATTGCTCCATCGGGCAGGAAACTAATTTCAAACAAGTCCAGAAGCTCTGCATGCCTTTCATCAAGTCGAAAAAGGATGAGGCCAAGAGTGTTGGGCCCCATGCTTTAAATCTGAAGCTTCCATTTGGTGAAATGAATGTTCTCGAGGAGAATTTGGAGTTGATCAAGAGGCAGGTAGGCCTTGACCATGTAGAGGTCTTGTCAGCTTCTGATGAAGCAACTCGTGCTAAGGCTGGTGCTCATGTTTCAATGTTGGACAAGACCCCGCCTTCTCCTGGTGAACCAGTAGCAATCTTCATCAGCAAGCAGGAGTTTGAAGCCCAGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029860