BGIOSGA029917

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Revision as of 09:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029917| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029917, complete gene.| tag = OsI_310...")
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Gene Name

BGIOSGA029917

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029917, complete gene.

LocusTag

OsI_31028

Ensembl Transcript ID

BGIOSGA029917-TA

Ensembl Protein ID

BGIOSGA029917-PA

Length

7723

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9872312..9880034

Sequence Coding Region

9879904..9880034,9879735..9879765),complement(9879476..9879579,9875496..9875566),complement(9872312..9872937

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9872312..9880034 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9872312..9880034 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTGGATACAATGAACTCTTCATCTGCCTCATCTCCAGTGAGGATATGAAGGGAGTCCCATTGCCAATGTCCATCAAGCAAACTGATATTGAGTTCACCTCCGCAACAACAATCATCTCAGCGATATACTTGTGGCCAGAGGTTGCAGGAGATAAGGTAGCTGGAGCCACTGGAAAGCCCACAATCGATGCTTATAAATCCTTCATCTACAAGGGGAGGGAGTCAGCTGAGCCATTTGCACTCCACATGTTAATTCGCAGATTTATCGAGCTAGCCAAAAGGTTTACTGCACTGATCTGTGCAGGGCAAGAAACACAACAGTTAATGACTGGGTTCGTGAGCATCGACTGCGGGCTAAGTGGCCGTCCCTACGTGGACGAGATCACCAACATTTCCTACGTCTCCGACGACGCGTACATAGCAACCGGAGAGAAGCACGAGATTTCATCGGAATACAGAAACCTGGCGTTGTACAGGTCGGGCCTTAGCCTGAGGAGCTTCCCTTCCGGCGGCCGCAACTGCTACGCCGTCGCCGCCGCCGCCGCGAGAGGCCGCAGCAAGTACCTCGTCAGGGCGTGGTTCATGCACGGCGACTACGACGGCGGCGGGGGGAGCCTCGCGAGCACGCCGGTGAGGTTCGACCTCTACATCGGCCTGGCCTTCTGGTTCGAGATGACCGTCTCCGACGCCGCGACGACGTACGCGTTCGAGGCGATCACCGTCGCCGCCGCCGGTGGCTCGTCGTCGTCGCTGTCGGTGTGCCTGGTGGACACCGGACACGGGACTCCGTTCGTGTCGTCGCTGGAGGTGAGGCCGATGAGCAGCGACATGTACCCGGACGCGGTGGCGAACCAGTCGCTCGGCCTCTTCACGCGCGGGAACATGGGCGCAAGCTACTTCCTCAGGTCCGTCGATCATGATCTGTTCGTTTCTAATTCGTATTATTCTGGACAATGA</cdnaseq>

Protein Sequence

<aaseq>MAAGYNELFICLISSEDMKGVPLPMSIKQTDIEFTSATTIISAIYLWPEVAGDKVAGATGKPTIDAYKSFIYKGRESAEPFALHMLIRRFIELAKRFTALICAGQETQQLMTGFVSIDCGLSGRPYVDEITNISYVSDDAYIATGEKHEISSEYRNLALYRSGLSLRSFPSGGRNCYAVAAAAARGRSKYLVRAWFMHGDYDGGGGSLASTPVRFDLYIGLAFWFEMTVSDAATTYAFEAITVAAAGGSSSSLSVCLVDTGHGTPFVSSLEVRPMSSDMYPDAVANQSLGLFTRGNMGASYFLRSVDHDLFVSNSYYSGQ</aaseq>

Gene Sequence

<dnaseqindica>1..131#270..300#456..559#4469..4539#7098..7723#ATGGCTGCTGGATACAATGAACTCTTCATCTGCCTCATCTCCAGTGAGGATATGAAGGGAGTCCCATTGCCAATGTCCATCAAGCAAACTGATATTGAGTTCACCTCCGCAACAACAATCATCTCAGCGATGTAAGTCTTGGTTGTGTTATTAACACTGATCCGTTCCCAGAAATGAAGCCCCATATAGACATCGAAAACCAGTGGCGAGCTGACAAGATCATTTCCCTTGCCATCGTAGTTCCCATGCATGAACATTGCTCTTACCAGATACTTGTGGCCAGAGGTTGCAGGAGATAAGGTGTAGCAGTTTCGACCTCCAGTGGGGAAACTTCTGAGGTTCAGGCCTGTCTTGAATAATTCCTGTCCATTGTATTCTGCAGAGATGTTGTGGTTCTCTCCTGTGTATATATACCCATCATCTGATGTATAATTGAGACCTGTTTTCTCATCCAGGTAGCTGGAGCCACTGGAAAGCCCACAATCGATGCTTATAAATCCTTCATCTACAAGGGGAGGGAGTCAGCTGAGCCATTTGCACTCCACATGTTAATTCGCAGGTTAGCCAATAGAATTATAATTACAGTCATGGAAGAATAATCCTTCCCATAAAACGTATTGGCACCAAAAATATGAAAATTTATCAGGTACCACTTGGCAAACTGAAAATGATACGGTAGGTTTGTTTGAGTCTGAAAATGGTTCCACTGCTATGAGATGTATATTGTAGTTGGAATAATTCTGTGCTTTGCAGGGGCTTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCCTCTATAAAAATATGCAAAGGTCAAATTCAATCTACACATGATAAAAGCTAAAATAACAACTAAGACTACGAAAGAGTGCCGTTACATTTGTAGCTGTATTTATTATTTTTGTTCCATGAGTAAATAGAAAAATAGTTATTTGGAGATGTCTAGCCGAATAATCCATGTTTCCTAACTTTTACAAAAAACTTTTTATAACTATTTTTCTATTTATACTGTATGTAAGAAACCAGTGCACATGCCCCTGAAAAGCTTAAAATTCATCTCTAAAGAAGCTACTCCTATATACTCCCTCTGTTCTATATAATACGTCGTTTTAACCTCTCTAGCTATCTCTTATCTAGATTTACTAACATCTATATAAAGTTCAGACACATAATACAAGTCGTTTTATTAACATCTCTATCTATTATCTAGATTCGCTAACTTTATATGAATTCTATATTACATGTCATTTTAACCTCTCTATGCATGAATCAATTTGAAAAACAAAACGTCTATAATGTGGAATAGTTAGACAAAAACATTGGACGCACCTAATGAAGCTGTCTGTGAGTGCACAAGTAGAGGCAGTAGACCAGTGACAAGCGTGAACAAGTAAGATGGCAGGCTGCTTGACCACATGCTCTCCAGGTTTCTTGCTGATTTCCCCAGGGATGTATCACTGAAGAGAGCGGTAGAACCTGCATCCTTGATCGCATATATATAGAGACACCTATGCCCAAATGACACGCTTGCGAGGCTATAGCTAGAGAGTGCTGTTGTTTTTCCAGCAGTTGACACGTACGATCGCGAGGCTACAGGGGTCAAGTCGCCGCAAAAGCGATAGGTCTACCGTCTACCTATGATTCAAACCAACACCTGGAGTCAGTGGAAATTGGGAAAAAAAAATACTGCCTCCCTCTTTTAATATAAGTGATTTTAACATTTTACTTGCACTATTAAACCATTTATCTTATTAAAAAAATTGAAATTATTATTTATTTTATTTGTGACTTACTTTATTACCTAAAGTACTTTTAGCATAACTTTTCGTTTTTTATATTTGCACAACTTTTTAAATAAGACGAGTGGCTAAACAGTGCAAGCAAAATATCAAAATCCCTTATATTAGAGGACGGAGAGAGTGTATGAGTTGGAGTACTAAAGAGACCAACACATGGAGTCAATAGAAATTAGGAAAAAAATATGTTAGAGTATTAGGAAGAAACTTAGTAGCATCTATTATTGCTAGATACTACCTCTTTTTTTAATATATGATGTCGTTGACTTTTTGATAAACATTTTACCATTCGTATTATTCAAATTTTTTTGTGAAAATATAGAAATTTTAAGTCATGCTTAAAAGAATAGTTGATGATAAATTAAATCACAATAAAATAAATAATAATTACATAAATTTTTAAACAAAACGAATGATCAAATGTATCTTGAAAAGTTAATGGCGTCATATATTAGAAAACAGAACGAGTAATAAAATAGTGAGAAAACATGAGTTGGAAGGGATTCGAACTTAGGCCAATGTGTTCGCATGCTCCTGGCAGCTCCCTGCTAGCGGAGCTCGGAATTGTTCTCATAACATACGACTCCCTAATAATTTCCCTAAGATTATTTCTAGCCGGAGACTTCTGGTATTTCTCTATATGGTGAAGCATTGTTCTCAAAACCAACCTTTATGGTGAGGCCACATCACCCACTAGAGATAATCTTGTCTAGAATAATTATATCATAAGTTTTGATTACCTTTTTAGTTTTGTAATTTATAGTATAATAAGGCTTAAAATTATTAGTGTGAATGTAAGAAACTTATAGGATAAAGGAAATTGACTGTAAAAGTAATTTTCAGCTCCCAATACCAGTGGAGTCAAGCGTCAAGACGACCGTGGGCAGGCCTTAATTACACTTACCCGTCCATGCGCCAAGAGAATAGTTTTACAACGATAGCATCCACAATTCAACAAATCCTAGCGGATTACTTTCTTTTGCAGCCACAAGGGCAACATACTCATTAATTACGCAATGACTGATAATCTAGCCGACTAATTAACGGAAGAAAATTGATAGATTGTGCAAGATTTTTTTCTCGCTTAGCTAATACATAATTCAATTCGCTGGTTCGTACGTATGTGACCGAGGCATAGTCGTGGTCTCGTGGATATGGACGCGGCTTGCTTGCAATATGTTTCTGTTCAGTTAGGCAGGCCATCCCTGTAATCCATTAATTGGTTTCGATCGATTGATTGAATGGAAACCAAGACTGACCTGCTGGGGGAGGATCGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTGTGCGACTTCGGTCGAGTTCCAACTCCGGCACTGCTCCCCCCGCTTGCTACCCACTTCCTGGATCGACCACGCTCACGTACGAGCTCCGACCGCGCCATCGCAGGCGCCGCCCTTTGAGATTTGAGCAGCCACCGCCGTAATACGATCCGCACGACGGTCGAGCGTTCTTGAGGTAAATGTTTGGGTACTGAATGTTCTTTGTGGGCATGTACTTGTTCCTTGGAACGCAGGATTATTCATCCTGGCTGATTCCTTCCAGGTTGTTTGTTCCTGGCGTTGGATCTGCTTGCCAGTTTGTGCAGATCTGTTGTCACGCAAGAACGCGCAGGATGTTAGTTCCTCATTTCAGAAGCTGGAATCATGGTAATGAGCTACTACTTTGCTTGCTGATTTAATTCTAAATTGTTCTCTTAACACATCACCCAACAAAGCAAAACCTTGGTACTCGGTCTCGGTATATAGTTTATGATCTCCGATGTGCGACGACTTTGGCTATAACTATATTTTACTAAGATAAGTTTGTAAAATCTAGTCTGAGATTATGAAATTACTTCAAGAAAAATCTGCACATACCATCTTTATGTATCAAATTAAATATTTAAAATTTGTTGATAGTCAACATTTCAGAACTTTGATTGGATCTTGTCCAGAATGTCATATATTAGCACAGGATAGGAACTCATCGAGTCATTGATACATTCCTCAAGTTCTCAACTCGTCAAGTAGCAATGTAATTGTAACTCCAGAGGGCAGACACACAACTCCATGCTTATTACAATAGTTAATACACTCAATAAGAAGGTTTAACTCTGTGACATACTTAACCACTTGAGCGTGCTCTTTCTTCTTTCTGATGGCATCGAGTTGAACGACAAGCCAAGATTGGCACCCTTTTGGCTAATATCGCTGATACTCACGTTACGGGCTTCTTCCAATGCCAAGGCATCCTTTAGTTGTGCAACCACCGTACTTATTGTTGGCCTTTCATCAGATGCTTCCTTTGTGCACAACAGCGCTAGTTCCTCCGGCCGCCGGCGAGGCGGCGGCGACCCAACTGCCTCTTTCCTCGCCTGAGGTCTCCCATGGCTCCGTTCCAGCCATCACTTGCCCGGCGGTAAGTTCTCACGGCCTTTACCTCGTCCATCTGTGCGTTTCGTATATGCAGTTTCTTGGTTTCATTCTTAGTATTTTTCCTCAGTATGTTCGTCTTCTGTTGGTGGCACTTTTATCAAAGAAAAATAAATTGTTTTGTTGTTCTTGCAGATTTATCGAGCTAGCCAAAAGGTTTACTGCACTGATCTGTGCAGGGCAAGAAACACAACAGTTAATGACTGGTAATCAATTTTTAGCTGCATCTAAAGCATCGGCAACAAGGCTGAATTTTGAGAAATTTATATATCAACATTTGGGTAGAAAAACTCAGCAGATATGTAATAAGAGTAATTCCCGTGTACCAAAGATAACTTCAACAACGCTGGACAGGACTGTACGCAACCTATGCTTATTGAGTTACTGTGTGAAGCATCTACAAAATTACTTATCTGCATGACTTCATCACAATTCACAAACACTTGACCACACTCATGCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTGGCAATTCACGAAGGAGTAATCGCATCCATTCCAGTAAATCCAGCGTCAGCAATTTCAGGCTTTGCTTTTGCCTGTATGTCATATTTAGATCTTTTCCTCTGCTCTTGTTCAAATATTTCTCTTCTACATTTTGATTTCTATATTAAATAGGATTCTCTCAATGGAAGTACTGTATAATAAATTTTACCATTACCTGCAGAATTTTCCAGAAAGAACGCTATTGTGCGGAACTGTGGATCTAGTCGACCAGATGTTTATCCAGAAGCAACCGGCAAACTAAAAAACAAGCAGCAGGTATTTAGTTATCCGCACCTCCCTATATATTGGACCTATGTGCATAAGATAACTTCTATTTAAGTGCTGCAAATCATTATTTAGAATTTTCAAGGAACATGCTTATTCATTTAGTTCGAAATGTTCCTCTATTACACTTGCGCATAACCCAACTAAGATGAATTCTCATTTGTCCAAAATCTTCACAATCATAAGACACAGAACACAGCATATGTAGTAGGATACATGCAACGAAAAGCAAGCAGTATATCATATATGCAACCCAACAGAATAGTTGGAGAACATGACTTCAAAATAGGTTGGCTAGTCTTTAATCATCTAGCCAATGGTGCCCAGTTGGCTGATGAATCTGGCTTAATGCTGCCTGGCCATTATCGCTGTAGCCATCGATATGGCGAGCTTCTTCCAATGCCAAGGCATCTTTCAGCTGCTCCACCACTTCTGTCATTGTTGGCCTATCATCAGACACCTCCTTTGTGCACAGCAGTGCTATGTCCGTGACCTTCCAGACCGAACCCATGTCGTATGCATCTTCAAGACGCGGATCAACGATAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTAGTACTGATTGTAACACTAACCAGGACTAAAGATATCTTTAGCCCTGGTAGGTGTTACTAATCGGTACTAAAAATACATCTTTAGTAATGGTTAGTAAGACCAACTCGGAATAAAGATCCTTCATCTTTAGTCTCGATTGGTTAGTGTTACCAATCGGTACTAAATATGTATTTTTAAGTACTGATTGATAATACCAACGAGGAGTAAAAATATTTCTAGGGACTTGGACTTTTAAAACTGGAACTGGAACTAAAGCATTTTTAGTACCGGTTCTTAATATAACCAATATATTTGTGTTTTTGGGTACCACGACGAAAGATCAGTTCTCCAGTAGTGATCGGATCGCTAGAAAAAAAAAATTTCTTGCACGTCACGTATAAGATCTCGGTCTAGCCAACGATATCATAGTTGCATAAAGTTTTATATAAGTTATATATCGTAGTTATAGTTACAATGCAATTATACTTTAATTATATTATATATAATTATATTTTAAAGTTTTTTTAGAAAAAAACTTACGACAGTTTTTTATACTTCCATCTAGAAATTAAAACTTGTTGAGAATTGGATACAGTGTCAGACCTTTGACAAAGTATCAAAAACTAAAATCAACAGCTCGATTTTAAAACTCTACGGCCACAATGCACTGAGATATATCGATGAAAAAATACCAACGATATGGTGATGAAATGATGGGTGCAGGACTCCATCCATCAAGATTCCGTCTGGGTGCCATGGCAAATATTATACACATGTTGTTGCACAATAATCAATAGGAATTTAGTGAGTTTACCGCTTGTCTTCATCTCTTTAAGAATTTAGGAGTAGAAAATCTGGCAACGGTAATATTGTGTAGTTATCTTTATTAGTGACTCGTTGACTAAATGACTAATTATTCACAGATGTGTATTTGTGTGTGCGGGTTGTTTGTTGAATAAGAAAAATACTGCAATGAGTATATAATAAAAGGCATAGTAACGCACACAGAGTTACCATACAACTTTCAAACCGTTCCTCTCTGTAAATAATTTATAGGTTGGCGCGAAACCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGCAAAGATCGAAGATAAAAAGCAAGATGGTGTTTTTTTTTTCTTATTTTAATATATCATACATCAAGTCAAGAGAGTTGGTCTAACACCTTTTCTATGTGTATCATTTGAAAGGATTTTTCCTGAAAAATATGGCATAGAATGGAACCAATATTCTCGGTTAACATCTCTTATCACTGACAGGGTTCGTGAGCATCGACTGCGGGCTAAGTGGCCGTCCCTACGTGGACGAGATCACCAACATTTCCTACGTCTCCGACGACGCGTACATAGCAACCGGAGAGAAGCACGAGATTTCATCGGAATACAGAAACCTGGCGTTGTACAGGTCGGGCCTTAGCCTGAGGAGCTTCCCTTCCGGCGGCCGCAACTGCTACGCCGTCGCCGCCGCCGCCGCGAGAGGCCGCAGCAAGTACCTCGTCAGGGCGTGGTTCATGCACGGCGACTACGACGGCGGCGGGGGGAGCCTCGCGAGCACGCCGGTGAGGTTCGACCTCTACATCGGCCTGGCCTTCTGGTTCGAGATGACCGTCTCCGACGCCGCGACGACGTACGCGTTCGAGGCGATCACCGTCGCCGCCGCCGGTGGCTCGTCGTCGTCGCTGTCGGTGTGCCTGGTGGACACCGGACACGGGACTCCGTTCGTGTCGTCGCTGGAGGTGAGGCCGATGAGCAGCGACATGTACCCGGACGCGGTGGCGAACCAGTCGCTCGGCCTCTTCACGCGCGGGAACATGGGCGCAAGCTACTTCCTCAGGTCCGTCGATCATGATCTGTTCGTTTCTAATTCGTATTATTCTGGACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029917