BGIOSGA029924

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Revision as of 09:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029924| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029924, complete gene.| tag = OsI_310...")
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Gene Name

BGIOSGA029924

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029924, complete gene.

LocusTag

OsI_31016

Ensembl Transcript ID

BGIOSGA029924-TA

Ensembl Protein ID

BGIOSGA029924-PA

Length

5453

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9678280..9683732

Sequence Coding Region

9683125..9683732,9682023..9682498),complement(9681793..9681928,9681628..9681699),complement(9681160..9681234
,9680898..9681010),complement(9680493..9680746,9680219..9680345),complement(9678787..9678979
,9678280..9678673

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9678280..9683732 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9678280..9683732 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCATTTTTCATTCCTCCATCCGTTTGCGCATTAGGTTTCCTAAGCATCGATTGCGGTTTGGAAGGAGACGACAGCTACCCGGATGACCAGACCGGCATTACTTATGTCCCTGATGGTCCATATGTCGACTCTGGGGAGAACCACAGGGTAACCACCGTGTACAGGAACTACTGGGGCCAGGACTACCGTACTCTCAAGACGCTCAGGAGCTTCCCTTCCGCTTCTGGTAAGCGGAACTGCTACAGCCTCCCTACCGACGTCGGGGACAAGTACCTTGTCAGGCTGGAATTCTTATATGGCAACTACGACAGCATGGACAGCTCTTTGCTTAAATTCAACTTATCTCTTGGGGTGAACCACTGGAACACCGTGAATTTGGACACCACCGACGACCAAGATGGTTATAACTTTTATGAGGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGTGTGCCTCATCAACATTGGCCAAGGCATACCATTTGTGTCCACAGTAGAGCTGAGGCTGCTCGGCACTTTGCCCTACCCGGCTATCATCGGCAATCAGTCACTCTCCCTCTATGTCAGAAGGAGCATAGGATCGAGCGCTGACGACGATATGAGGTATCCTGATGATCAGTATGATCGGTACTGGATCATGGGAGAAACAACAGGAGCTGCCGACATGTCCAACATTTCCACCCCGACGATCATCCCGCCGAGCGTCCCTTTTGCAGTGCCCTCGCCTATACTCCAGAAGGCAGTTGTGCCAGCTGACAACTCAATGAAACTAGTTTTCCACTCAGACCAATTAGATGCACAGCTCCGTGACCACCTTGTGATCCTACACTTCGCCGACTTCCAGAATAACAAGTCCCGGGAATTCACTGTTTCAATTGACAGTGGTGTACAGAGCGGCCCATTCAGTCCACCATACCTGAAAGTTTTGTCCATCACCACAGATTGGTCCAGCGATACCGAAGGCAAGTATAACTTCACACTCACGGCCACATCAACGTCTTCCCTGCCCCCGATCCTCAATGCTTACGAGGTCTACGGTCGCATCATCCATGACAATCCAATGACATTCTCCCAAGATTTTGATGCGATCATGGCTATTAAATATGAGTATGGAATAAGGAAGAACTGGATGGGTGATCTGTGTTTCCCACCTGAATTTGCTTGGGATGGTGTTGAATGTAGCAGTGACGGAAAAACTATGAGGATAATATCTCTCGATCTCTCCAACAGCGAACTGCACGGGTTAATATCCAATAATTTCACATTGCTTACTGCCCTCAAGTATTTAAACCTGTCATGCAATCAACTGAATGGAGCAATTCCAGACTCCCTCCGTAGAAAGAATGGATCAATGGTTCTAAGTTATGAGTCTGGTGGAGATATGTGCAAAAAACCAGTAAGTCCGTCGTCAAGAAACAGAGCAGCTGCCTTAGCTGTTTCAGTAGTGGTTCCAATGCTGGCAGTGGCCATACTTGATGATCCTCCCACGGTACTAGAACTCACGGGTGCTCCAGGACATAAGACAAATCATTGGGACCGTCTACAAAAACCTGAAAATCGTCGATTCACATTTGAGGAGCTACAGAAGTTCACTGATAACTTCAAACGTTTAATTGGGCATGGAGGCTTTGGGCATGTGTATTATGGTTCTCTAGAAGACAGTACTGAGGTTGCAGTCAAGATGCGATCTGAATCATCATTGCATGGGCTTGATGAGTTCTTAGCTGAGGTTCAGAGCTTGACCACGGTGCATCATAGAAATCTTGTCTCTTTGTTTGGTTACTGCTGGGACGACGATCACTTAGCGCTTGTCTATGAGTACATGTCTAGTGGCAATCTTTGTGATTATCTGAGAGGCCTGGATTATCTACACAAGGGTTGCAACTTGCCAATAATTCATGGGGATGTGAAGACAAATAACATTCTCTTGGGTCGAAATCTAAAAGCCAAAATAGCAGATTTTGGGCTTTCTAAAACCTATCATAGCGACTCTCAAACTCACATATCAGCTAGTATTGCAGCTGGATCTATGGGTTATATTGACCCTGAGTACTACACCACCGGCAGGCTCACTGAGAGCAGTGATGTCTATAGCTTCGGTGTTGTTTTACTGGAGGTAACTACCGGTGAACCTCCCATAATACCTGGAAATGGACACGTTGTTCAGCGTGTGAAGCAGAAGATTGTCACAGGTAACATCAGCTCTATTGTTGATACACGTCTTGGAGGTTCCTATAATGTTAGCTCCATGTGGAAGGTTCTAGATGCTGCCATGATGTGCACCACAAATATTGCTGCTGAAAGGCCAACAATGGCTACAGTGGTTATGCAACTGAAGGAAAGTCTAGAATTAGAGGAAGCTCATGGTGAAAGGGGTGATATGGAAAACCAAGCAAGGGATAACACATATTTGATGTCCACATTTGGTCCATCGGCAAGATAA</cdnaseq>

Protein Sequence

<aaseq>MPFFIPPSVCALGFLSIDCGLEGDDSYPDDQTGITYVPDGPYVDSGENHRVTTVYRNYWGQDYRTLKTLRSFPSASGKRNCYSLPTDVGDKYLVRLEFLYGNYDSMDSSLLKFNLSLGVNHWNTVNLDTTDDQDGYNFYEAVFVAWASWAPVCLINIGQGIPFVSTVELRLLGTLPYPAIIGNQSLSLYVRRSIGSSADDDMRYPDDQYDRYWIMGETTGAADMSNISTPTIIPPSVPFAVPSPILQKAVVPADNSMKLVFHSDQLDAQLRDHLVILHFADFQNNKSREFTVSIDSGVQSGPFSPPYLKVLSITTDWSSDTEGKYNFTLTATSTSSLPPILNAYEVYGRIIHDNPMTFSQDFDAIMAIKYEYGIRKNWMGDLCFPPEFAWDGVECSSDGKTMRIISLDLSNSELHGLISNNFTLLTALKYLNLSCNQLNGAIPDSLRRKNGSMVLSYESGGDMCKKPVSPSSRNRAAALAVSVVVPMLAVAILDDPPTVLELTGAPGHKTNHWDRLQKPENRRFTFEELQKFTDNFKRLIGHGGFGHVYYGSLEDSTEVAVKMRSESSLHGLDEFLAEVQSLTTVHHRNLVSLFGYCWDDDHLALVYEYMSSGNLCDYLRGLDYLHKGCNLPIIHGDVKTNNILLGRNLKAKIADFGLSKTYHSDSQTHISASIAAGSMGYIDPEYYTTGRLTESSDVYSFGVVLLEVTTGEPPIIPGNGHVVQRVKQKIVTGNISSIVDTRLGGSYNVSSMWKVLDAAMMCTTNIAAERPTMATVVMQLKESLELEEAHGERGDMENQARDNTYLMSTFGPSAR</aaseq>

Gene Sequence

<dnaseqindica>1..608#1235..1710#1805..1940#2034..2105#2499..2573#2723..2835#2987..3240#3388..3514#4754..4946#5060..5453#ATGCCATTTTTCATTCCTCCATCCGTTTGCGCATTAGGTTTCCTAAGCATCGATTGCGGTTTGGAAGGAGACGACAGCTACCCGGATGACCAGACCGGCATTACTTATGTCCCTGATGGTCCATATGTCGACTCTGGGGAGAACCACAGGGTAACCACCGTGTACAGGAACTACTGGGGCCAGGACTACCGTACTCTCAAGACGCTCAGGAGCTTCCCTTCCGCTTCTGGTAAGCGGAACTGCTACAGCCTCCCTACCGACGTCGGGGACAAGTACCTTGTCAGGCTGGAATTCTTATATGGCAACTACGACAGCATGGACAGCTCTTTGCTTAAATTCAACTTATCTCTTGGGGTGAACCACTGGAACACCGTGAATTTGGACACCACCGACGACCAAGATGGTTATAACTTTTATGAGGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGTGTGCCTCATCAACATTGGCCAAGGCATACCATTTGTGTCCACAGTAGAGCTGAGGCTGCTCGGCACTTTGCCCTACCCGGCTATCATCGGCAATCAGTCACTCTCCCTCTATGTCAGAAGGAGCATAGGATCGAGCGCTGACGACGATATGAGGTACAAATGTTCTTTCCATGGTTGTAGCATAAAGAGCATATTAGTGGCGCATATGCGGACCTATACAACAATGGTAGTTTTCCTTACTCGTAATTTTCTAAACCAACCTAAATTTTTCTCACTCCTAATTTTGCTAGTATTCATCATAGTCAACTTGTTTTAAAATTGTCTAATGAGAAAAACTATATATATGTTTTTTTTTCTTACAAAGTCTTACAAAAGGTGATGTGGCCCACCATAATTGAATCTTGATGTTCTATACTCTCAACTAAATAAATCATTAAATTATTGCCAATTTGGTGAAAAATTTGAAATCTGATTTGAGGTTGCATTTAATTAGGCTCAAGGAGAATTATAGATCTTTAGTGCAATCATGGATTGATCAATTGTAACTGTTTTAGAGCGTAGTTCTTTTCTGCCCTTTGTTTCTTAGTATATACACTCTTTTCCATTTATATAAAATTTATATACCGTGGAGGCCTTCCCCACTGTTTCTTGGTAAAAAAAAATTAAAGCATTAAATCAAACGGGTGAGAACTTTGTTTGGAAGAGTTCTATAAGAATTTTTCTTAAGTACATATATATAGCACTGCTCTTGTGTAATCCTTGTACATTCGGGATCATAGGTATCCTGATGATCAGTATGATCGGTACTGGATCATGGGAGAAACAACAGGAGCTGCCGACATGTCCAACATTTCCACCCCGACGATCATCCCGCCGAGCGTCCCTTTTGCAGTGCCCTCGCCTATACTCCAGAAGGCAGTTGTGCCAGCTGACAACTCAATGAAACTAGTTTTCCACTCAGACCAATTAGATGCACAGCTCCGTGACCACCTTGTGATCCTACACTTCGCCGACTTCCAGAATAACAAGTCCCGGGAATTCACTGTTTCAATTGACAGTGGTGTACAGAGCGGCCCATTCAGTCCACCATACCTGAAAGTTTTGTCCATCACCACAGATTGGTCCAGCGATACCGAAGGCAAGTATAACTTCACACTCACGGCCACATCAACGTCTTCCCTGCCCCCGATCCTCAATGCTTACGAGGTCTACGGTCGCATCATCCATGACAATCCAATGACATTCTCCCAAGATTGTAAGCTCTCTATCTTTGTCTAGCAACGTACACTAAATAACACTGTCAACTATCTCTCTTGAATTTCTTAATTATATTTCTATTCATATGTTAGTTGATGCGATCATGGCTATTAAATATGAGTATGGAATAAGGAAGAACTGGATGGGTGATCTGTGTTTCCCACCTGAATTTGCTTGGGATGGTGTTGAATGTAGCAGTGACGGAAAAACTATGAGGATAATATCTCTGTAAGTATTATTGTGAAAATATACATTCACTACCATCATTTTATACATTGGGTACCATTTCTTGACATTTGATTACTTAAAACTATAATGCAGCGATCTCTCCAACAGCGAACTGCACGGGTTAATATCCAATAATTTCACATTGCTTACTGCCCTCAAGTATTTGTAAGTATATTTTCCACTGCCTTAGATTTGCCACATCTGAAATTCTCAGTTGGCATGAGTGGGGATCATTATCTGCTAGTGTTAAATATGACTGAAAAACACCAACTATAAATGGTGACTGGATGCAGTTTTACGGTCGTAAAATGGTATAAAACGAAAACATGCTTGTTATATTTTACTGCAGCTTTATCACTTAATAATATCATCCTTTGTGGCAAAAACGTAGCTTTGAAATATACCTGACAATAATTAAAGAGGTTTGGTACTTAATATACCTAGTACTCTACCATGCTTTTACCCTTGTCTAAATCTTTTAGTGGATAGGTTTGTTTTCACATTGTTATCAAGCTAGGGACATTGCTTAATACCTAAACTGCATATCGCTCTGTACAGAAACCTGTCATGCAATCAACTGAATGGAGCAATTCCAGACTCCCTCCGTAGAAAGAATGGATCAATGGTTCTAAGGTTTGGCTATTTTTATATTGATGTTAGATTTACTAATTAGCATTATCCGGATTGTGGAATGTTACTCTTTATCTAAAATTTAGGGACGTTAACACCAAACAATTTCTTTTAACCAATTTAAAATTTTAAACTTTGGACTGCAATTTCAGTTATGAGTCTGGTGGAGATATGTGCAAAAAACCAGTAAGTCCGTCGTCAAGAAACAGAGCAGCTGCCTTAGCTGTTTCAGTAGTGGTTCCAATGCTGGCAGTGGCCATACTTGGTCTGGCATATTTATTCTGGAGAGCCAAAAGAAAGCACAATAGTGCGTACCCTCTGCTATTGTAATCTTGAAAAAATATTGTTGCATGGTTTACCAACTGCATTTAGTATTTGCTAATATATATCTGTTCTTTCTGCACCTGTTTCTACAGATGATCCTCCCACGGTACTAGAACTCACGGGTGCTCCAGGACATAAGACAAATCATTGGGACCGTCTACAAAAACCTGAAAATCGTCGATTCACATTTGAGGAGCTACAGAAGTTCACTGATAACTTCAAACGTTTAATTGGGCATGGAGGCTTTGGGCATGTGTATTATGGTTCTCTAGAAGACAGTACTGAGGTTGCAGTCAAGATGCGATCTGAATCATCATTGCATGGGCTTGATGAGTTCTTAGCTGAGGTACCAACGACAGATACTATTAAGTTTAGCACAGTTATAATCTATAGGTTCCATATATGGTATACACATTTGAATATAAACAGTCTCATCCACTGTGAGATTTCATATACACTGAGATTTAATCTTTTGTTTTATCCCTTTACATAGGTTCAGAGCTTGACCACGGTGCATCATAGAAATCTTGTCTCTTTGTTTGGTTACTGCTGGGACGACGATCACTTAGCGCTTGTCTATGAGTACATGTCTAGTGGCAATCTTTGTGATTATCTGAGAGGTTCGTCCATTACAAACTTTAACCATTGAATGTTGGGAAGTTTTTGGGAGGATACTGGGCACACGTGATGACCTACACATAGTGCAAACCAACTAGTTGGCTATTCATCTTTCCTTCTTAGAACTATACACTGCCAAAGCAGCTCGTGTTGATTCTACGTGATTCTAGGCTAATGACTCACTTATGTTAAACGACAGTTTGCGGAAATACTACTATTATAAGTACTACTTGCCTGGAGAGACGACCATAGTTTAGATTGTTTTAAATAAAAAAGAGACTCATGGTTCATAGCAAGCCCTCATAACCAATTCACCCTAACACTATGTCTAGTGACTCATGTTTCTAGTGGTGACATGCTATTACTCTCTACTAAGGACCTTCATGGCCATAAAGATACCATAAAGGATTAAGTGTTGTTTTATATTGGTACCAAATTCTGCCCTATCAATCCTTTGGTTGTTTAGACAGTAGTTCGATTACTTTGGATTCAGACGAACTATTGGCAATCTGACACTATTTTGGTAACTTTCCAGGTACGAATCCAATTCAACACTGAATTGGTAGTACACTAAGCATGATTGTTGCAAATTTACCCTACCAATAGTTTTAGTACTTAGGGTAGAAAACAAAACCTATCCTTAATTCTGTCTCTTTTGATGAAGTATCTTGATCTTGTATTTTGTAACCTTTTGTCGTAATTTTAATTGAAGGAAAATTTGTCATAGTTATTCTTGTTTCATTCTCAACACAACACAATCACAATCACAACACAACACAACACAATCATAATAAATAACTGTTTTGCAATATATTGAACCTGAAAGGCCATCTTGACTGATTTTGAAGACATGCTACTATGTGATATAGAAACTATTTAGTTGAAACATACTTCTCCTTGCTAGTGCTTGAAAACAAAGTAATGCCAAGTCATGATTTGCATCTCTCTAAGAAATCATCAGATTGGTTATTATGTTTTGTTAAAAAGGGATAAATACTATATGAGTATAGAAAAATGTTGTACAACAACATTAATTGTGGTATGAAGTTATTCGTAGAGTTCTCTTCTAATTGTATGTGTGCATGTATGAATGTAAAACCAGTATGACCGAAACGTTTAATTGGGCAACACGTGTAAAAATTGCGTTAGAAGCTGCACAAGGTATGCTACTATAGGAATACAGACAAAATTAAAAAATTATATTGTAATCCTTCTTCTTAGTATGGTTTTCTTATGTGTAGGCCTGGATTATCTACACAAGGGTTGCAACTTGCCAATAATTCATGGGGATGTGAAGACAAATAACATTCTCTTGGGTCGAAATCTAAAAGCCAAAATAGCAGATTTTGGGCTTTCTAAAACCTATCATAGCGACTCTCAAACTCACATATCAGCTAGTATTGCAGCTGGATCTATGGGTTATATTGACCCTGAGTATGAGTCTCTATGTGCACACTATTACTTTTGTGCTATCTATTCATATATATGATTGTTTTATAATATTCAACTTATTCACTCTTTGCAATCATTATGTTGGCCATTTGTAGGTACTACACCACCGGCAGGCTCACTGAGAGCAGTGATGTCTATAGCTTCGGTGTTGTTTTACTGGAGGTAACTACCGGTGAACCTCCCATAATACCTGGAAATGGACACGTTGTTCAGCGTGTGAAGCAGAAGATTGTCACAGGTAACATCAGCTCTATTGTTGATACACGTCTTGGAGGTTCCTATAATGTTAGCTCCATGTGGAAGGTTCTAGATGCTGCCATGATGTGCACCACAAATATTGCTGCTGAAAGGCCAACAATGGCTACAGTGGTTATGCAACTGAAGGAAAGTCTAGAATTAGAGGAAGCTCATGGTGAAAGGGGTGATATGGAAAACCAAGCAAGGGATAACACATATTTGATGTCCACATTTGGTCCATCGGCAAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029924

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA029924&oldid=29128"