BGIOSGA029939

From RiceWiki
Revision as of 09:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029939| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029939, complete gene.| tag = P0512H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029939

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029939, complete gene.

LocusTag

P0512H04.9-1

Ensembl Transcript ID

BGIOSGA029939-TA

Ensembl Protein ID

BGIOSGA029939-PA

Length

5630

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9360711..9366340

Sequence Coding Region

9365807..9366340,9363229..9364092),complement(9362460..9362903,9361728..9361917),complement(9360711..9361636

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9360711..9366340 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9360711..9366340 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCGCCTCTTCCGCGAGTCCCGCCGCGACTCCTCCTCCTCCAACGGCTCCTCCGCCGCCGCCGCCGCCACGGCCTCCACCGGCGGCCTCCCCTCCCCGTTCCCCGACCTCGGCGTCCCCCTCTCCGCCGCCGACCTCCGCGAGGCCGCCTACGAGGTGCTCGTCGCCTCGTCCCGCACCACGGGAGGGAAGCCGCTCACCTACATCCCCCAGGCGGCGGCATCGGCGGGTGGTGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTCTCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGCGGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAGCCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGAGCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCTCCTCCGCATCGCCGCGAGTCAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAACTCTTAAAGAAGACCTGGGGTATTCTGGGAATTAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTCCGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAAGGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTCAATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAACATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAGGATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACATTGGTGACCTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCCAGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATTGCAGTTGAAGATTCTGTGGATAGTGATGATGGAGGCAAGTCATTAATCAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATTGATGAAAGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCACCCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGCAGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MSRLFRESRRDSSSSNGSSAAAAATASTGGLPSPFPDLGVPLSAADLREAAYEVLVASSRTTGGKPLTYIPQAAASAGGGGGPASPASASSLSSANASSSPSLQRSLTSAAASKMKKALGLRSSASSKGGSPGSGGGGKSVPPRRPATVGELMRVQMRVSEPADARIRRGLLRIAASQLGRRAESMVLPLEFLQQFKASDIPDPQEYEAWQSRNLKLLEAGLLVHPLVPLNKSDVSAQRLRQIIRGAYDRPLETGKNSESMQVLRSAVMSLAGRSDDGTSDGCHWADGFPLNLHLYQMLVEACFDNDDGTVVDEIDEVMELLKKTWGILGINQMLHNLCFAWALFNHFVMSGQVDIELLSAAENQLAEVAKDAKTTKDPNYSKVLSSTLSSIMGWTEKRLLAYHETFNTSNIESMQGIVSIGVSAARVLVEDISHEYRRRRKEETDVARSRIETYIRSSLRTAFAQRMEEADSKRSSRNPTPVLSILAKDIGDLAIKEKNLYSPILKTWHPLASGVAVATLHSCFGNELKQFIAGLTELTPDTVQVLKAADKLEKDLVNIAVEDSVDSDDGGKSLIREMPPYEAENAIANLVKVWIKERIDRLKGWVDRTLKQETWNPAANRENIAPSCVEMLRMVGETLDAFFQLPIPMHPVLLPDLMFGLDRSLQLFVSKAKSGCGTRNSFMPQLPPLTRCEVGSNILFKKKEKPQNPQYRGSQNGTTNGADPLALPQLCVRLNTLQFVRGELENLEKKIKTGLRNVESAQADVTDGLDIKFELCQTACQEGIQQLCETTAYKVTFYDLGHVLWDILYIGDIASSRIEILLRELDPILETISGMVHNKVRNRAITALMKATFDGFLLVLLAGGPLRAFTRQDSQIIEDDFKALKDLFLADGDGLPEELVDKASSQVKNVLPLLRTDSESLIDRFKRMMAESNRSGAKNRLPLPPTTGHWSPNEPNTVLRVLCYRYDETATKFLKKTYNLPKKI</aaseq>

Gene Sequence

<dnaseqindica>1..534#2249..3112#3438..3881#4424..4613#4705..5630#ATGTCTCGCCTCTTCCGCGAGTCCCGCCGCGACTCCTCCTCCTCCAACGGCTCCTCCGCCGCCGCCGCCGCCACGGCCTCCACCGGCGGCCTCCCCTCCCCGTTCCCCGACCTCGGCGTCCCCCTCTCCGCCGCCGACCTCCGCGAGGCCGCCTACGAGGTGCTCGTCGCCTCGTCCCGCACCACGGGAGGGAAGCCGCTCACCTACATCCCCCAGGCGGCGGCATCGGCGGGTGGTGGTGGTGGGCCGGCGTCCCCGGCCTCCGCCTCGTCTCTCTCCTCCGCGAACGCCTCCTCCTCCCCGTCGCTCCAGCGCTCGCTCACCTCCGCCGCGGCGAGCAAGATGAAGAAGGCGCTCGGGCTGAGGTCGTCGGCGTCGTCCAAGGGTGGGAGCCCCGGGAGCGGCGGCGGCGGGAAGTCGGTGCCGCCGCGGCGGCCGGCGACCGTCGGGGAGCTGATGCGCGTGCAGATGCGGGTCTCGGAGCCCGCCGACGCCAGGATCCGGAGGGGCCTCCTCCGCATCGCCGCGAGTCAGGTAAATGAAAGGATCTCGAGCTCTCTTGGCTTCGGGTGGTTTTGGTTGTTAGCGCGTTCGTTCCCAGCGGGATTTCGGGTGAAAAATGTAGCTTCAAGTTTTTCTCATCTGATCATCGCCATTGTGGTAGATCTGGGTTGGGTTTCGTGGGAGGGTTCGCGAGAGTTTCAAATTTCGCTAAAAATACCCTCGTTTCTCGTATTTCTGTTTTTGTTTCCGCGTATTTTTAGTTAGAATGGGAAAATGCATTAACTTGAAGTATATCTCCTTTTTTTTTCTCGGGAGGGGAATAAAAAATGAACTCTCTCTCTCCTTTTTTTTTACCCGTAGATCTTGTAATTTGTTGGTGCCAGCCGGAGTATATCCAGTTATTTTCTGTGATTTGTTTATCATATAGCCTCGGAAGTTGGAACTTAGTCAATATACGTTTTCTCAAGATAATTTTTATGTGCGCCTTTTATTATTATTACTATGACTGTTTCAATACCATGATTCTTAGCTTGATCTGCGGTTTTGCTTCAGTAGTAGGATACTCGGATGCATTGTACAAAGCAAAGCTATACATACCAACTCTTCTCGATAGAGTCACATCCAAATGGTTGTTGCTAGCATATCTTATAATGTCAACAAGGACAATAATTTAGTGTTTTGTTCGAATGCATGGATTTTATATCAATTTCACCGTAGATTAATTCATTTCACACATGATTTTTCCTGTGTCTGAAATGGGTTCGTAATGTTATCATCGGACTGTTTTTGATAAGTACAAAGTGACGGAAATGTTTTTTGCTATTTTACTTATGCATGCTTATAAGTTTGTAGATTGGATGTGTCTCCACAAAAGGACAATTAGCCATTTATTCTTGTCATGCTCACTACAAAACAAAGACATCTTTATTTTACCGCAGTTTTGAGGAATGGAAACAGTATATGGCAATGTACTGCAGTCATCCATGAGCAATGTACTAGAGGCATCCATGTACTAGAGGCAGTATTGAAGAAGATAGTTCTACAAAGTGTCGTAAAATTTGTGATTTTAGTGCTGAGTGCAGCGTACTGAGTGTGGGAGGAGGGAGGAGCGAGGGTATCTACTGGATTATCTTAATTGCTGGATTATCTTAATTGCAGAAGCTACTCTGTCATAACCAAAACATCCTAAATCTACACCCTGAGTGTTGAGCTTCCTGCCTTGACCTTCATGCTCTAAGTTGTCTTATATGCATTCTGAAAATGGTTGATTCATTGCACATCTCCACTTCAGTAGGTTTCTTAGTTAAACTGTGCTGAATGATGATATTTAGATCTTTATTGCCAAGTCTTCTCCCCAAAAGAGCAAATTTGCAGGCTTTAGATGACCATTGTAAGTTTGGCAGTTTAGCTTTAGCTGCCTGATTATTTTTTTTATTGTATATGTTTTATGTTTTTATATACCCTCCTATGACATGGTCTGTTTGATAGATGTGTTAACAGATCAACAACATTGGACAGTTTAAACTTTAAACAAACACATAGCTAAGTATTGACATGTTGCTGAATGTGTGTTTGTGTTTTCTGGACTTTTAGCATGTTTGATGTCAACAAGCCAAACATGATCTTATTGTATATATCATATCAAAGATACTCTAATCTGCTCTATTATTGTTCGGGACTTAACGCCTGTTCCTGTAATTGTTGGTACCAAGTTTGAACTCCATTTTTCTTTTTCTTGAAACAGCTTGGCAGGCGTGCTGAATCTATGGTCTTGCCCTTAGAATTCCTACAGCAGTTCAAGGCATCAGATATCCCTGATCCTCAAGAGTACGAGGCATGGCAGAGTAGGAACTTGAAGCTTCTTGAGGCTGGTTTGCTTGTTCACCCACTTGTTCCATTGAACAAATCAGATGTTTCTGCACAACGACTGCGGCAAATTATACGTGGAGCATACGATAGACCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGTCCTACGTAGTGCTGTCATGTCCCTTGCTGGTAGGTCTGATGATGGGACTTCTGACGGATGCCACTGGGCTGATGGTTTCCCCTTGAATCTCCATCTATACCAGATGTTGGTAGAAGCTTGCTTTGATAATGATGATGGCACTGTTGTTGATGAGATTGATGAGGTGATGGAACTCTTAAAGAAGACCTGGGGTATTCTGGGAATTAACCAGATGCTTCACAACCTTTGCTTTGCTTGGGCATTGTTCAACCATTTTGTTATGTCCGGGCAAGTAGATATTGAGTTGCTCTCTGCTGCGGAGAATCAGTTGGCCGAAGTTGCAAAGGATGCCAAAACCACAAAAGATCCAAATTACAGCAAAGTGTTGAGTTCAACTTTAAGCTCAATAATGGGTTGGACAGAGAAAAGACTTCTGGCTTACCATGAGACCTTCAATACAAGTAACATTGAGTCCATGCAAGGTATTGTGTCAATTGGAGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGTCGGAGGAGGAAAGAAGAGACTGACGTAGCTCGCAGCAGGATAGAGACCTACATAAGGTCTTCACTCCGTACAGCTTTTGCTCAAGTAAGTCCCTATTATTTCTCACTCTGATTCATATTGATTAAATGTTATATTCCATACTTTGGTATGCTGAGATGCCTTGTTTAGATTATTGCAATATCTTTACTTTTAATGGCTAATGCGCTTTGGGGAAGAAAAGCTAGAAAGTAGATTCCTGGTAATCAACCACAAGAAACTGTTTTGTTCAAACTCAAGCCATCCTATTAGTAATTTTGTTTCTTTTGAACCATATAATTTGAACTTTTTAAATCTTGCTAGCTGATCCTTTCATGTACGTCTTTTCTATAGTGCAGTAGCACAGTAATGTGACACAGCTTTCACTTTGCAGAGAATGGAAGAAGCAGATTCCAAGCGGTCATCAAGAAACCCTACCCCTGTTCTGTCTATCCTTGCAAAGGACATTGGTGACCTAGCAATTAAGGAGAAAAATTTGTACAGCCCAATTTTAAAGACATGGCATCCCCTTGCTTCAGGCGTTGCTGTTGCCACCCTTCATTCTTGCTTTGGAAATGAGCTGAAACAGTTCATAGCTGGACTTACAGAGCTGACCCCAGATACGGTTCAAGTGCTTAAGGCTGCTGATAAATTAGAGAAGGATCTTGTTAATATTGCAGTTGAAGATTCTGTGGATAGTGATGATGGAGGCAAGTCATTAATCAGAGAGATGCCACCATATGAAGCTGAAAATGCAATTGCTAACCTGGTGAAAGTTTGGATTAAAGAAAGGATAGACAGGCTCAAGGGATGGGTTGATCGGACTTTGAAACAAGAGGTGCTTTTACTTTATTTCACAGTACATATTTTTTTCTTTTGGTATAAACAGAAACTATCTTAATTTAGTAACTGATGATGCATGTTGTTGTGATTTTTATTACGATAAGACTAAATTACTCTGTGCATGTAGATGCATAACATTTGTAAACATTATCTGCTATTTTTCCTGAACCGTCCATATCCATGTGTCATTGATGACTGCAATCTCCAATCTGGGCTCTGATATATGTTCATTCTCTCATCTTATCCCAACTATGGCTGCCAAAATTGCCGCATTTGTTTGATTTGCAGTCAAAATTTTGACATCACACCAGTTTTTCAGAATGGAAAAAAAATTATAGCTAGTTGAGTCACATCCAGATGCATGCTATGTGTAAACCAAATGTTAGATTGGCTCAGTCAACTTGTGAGATGTAATTGTCCTGAATATTCTTCTTGAATGATGAGTCCAACTTGTTCTTGACATATTGTGTTTGAATTAACTTAGCTTGATTTTCCTGTTCTAAAATTCCACTAAGTCTGTCAATGTCTTTCATGCAGACTTGGAATCCAGCTGCCAACAGAGAGAATATTGCTCCCTCTTGTGTGGAGATGCTTCGGATGGTTGGTGAAACATTAGATGCATTTTTCCAATTGCCCATTCCAATGCATCCAGTTCTTCTTCCTGACCTGATGTTTGGACTTGATAGAAGCCTACAGCTTTTTGTGTCTAAAGCAAAATCTGGCTGTGGTAAGTACTGAGCTCATGGCACATTTTTCTATAACATGGTGTTCAGATGCAGGGTACAAATGTTCATATTTTAAACATGCATTAATTACAGGAACAAGGAATTCTTTTATGCCCCAACTACCTCCGTTGACACGATGCGAGGTAGGATCGAATATATTGTTCAAGAAAAAGGAAAAGCCACAGAATCCACAGTACCGAGGATCACAAAATGGAACAACCAATGGCGCTGATCCCTTAGCCCTTCCTCAACTCTGTGTACGCTTGAATACGCTTCAATTCGTGCGAGGTGAACTCGAGAACTTAGAGAAGAAGATAAAAACAGGCTTGCGGAATGTCGAGTCAGCTCAGGCAGATGTTACCGATGGATTGGACATCAAATTTGAGCTTTGTCAGACAGCCTGTCAAGAGGGCATTCAGCAGTTATGTGAGACAACTGCATATAAGGTGACATTCTATGATTTGGGGCACGTTCTCTGGGATATCCTTTATATTGGTGACATTGCATCAAGTAGGATCGAGATATTGTTGAGAGAACTCGACCCTATACTAGAGACCATATCTGGTATGGTGCATAACAAAGTGCGGAACCGTGCTATAACCGCATTGATGAAAGCCACTTTTGATGGGTTCTTGCTGGTGCTTCTTGCTGGTGGGCCTTTGCGTGCTTTCACCCGTCAAGACTCCCAGATAATAGAGGATGACTTCAAGGCCCTTAAAGACCTGTTTTTAGCAGATGGTGATGGTTTGCCAGAGGAATTGGTCGATAAGGCATCCTCCCAGGTCAAGAATGTCCTACCCCTCCTACGAACAGACTCCGAGAGCCTTATTGACCGATTCAAACGCATGATGGCTGAGTCTAATCGATCTGGAGCCAAGAATAGGTTACCATTGCCACCAACAACAGGGCACTGGAGCCCGAATGAACCCAACACAGTCCTGCGAGTTCTGTGCTACCGTTATGATGAGACGGCTACCAAGTTCCTAAAGAAAACCTATAATCTTCCCAAGAAGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029939