BGIOSGA029961

From RiceWiki
Revision as of 09:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029961, complete gene.| tag = OsI_309...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029961, complete gene.

LocusTag

OsI_30933

Ensembl Transcript ID

BGIOSGA029961-TA

Ensembl Protein ID

BGIOSGA029961-PA

Length

6935

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8774749..8781683

Sequence Coding Region

8781337..8781683,8777491..8777611),complement(8775744..8775797,8774749..8775042

Genome Context

<gbrowseImage1> name=IndicaChromosome09:8774749..8781683 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:8774749..8781683 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGGCGGCGGCGAGACCTACGGGTACGGCGGCGGACGGCGGGAGGGCGGCTGGGCGTGGTTGGCGGCGGCGGCGGCGGCGGCGGACGGCGTGTTCTCGCGGTCGTCGTCGTCGGCGAGGGAGGACGACGAGGAGGACCTGCGGTGGGCGGCGCTGGAGAAGCTGCCGACCTACGACCGAGCACGGACGGCGCTGCTGGCCTTGCTGCCGGACGGCGAGCTGCGGGAGGTGAACGTGCGGCGGCTCGCCGCCGACGAGCAGCGCGCGCTGCTGGAGCGCGTCGCGGGCGTCGCTGACGACCACGCGGGCTTCCTCTGCATGTTCAAGGAACGTTTGGATCGGGTTGGAATCAAGCTTCCGACTATTGAAGTGCGGTATGAGAACTTAAATGTGGAAGCAGAGTCATATGTTGGCAGCAGAGGTCTTCCCACCATTTTCAATACCTATGCTAACATATTCGAGGCTGCTACAACAGGAGAGCATAAAGCCGAGGTGGTCACAAATCACATACTAAAGGTTACATCAAGGAAAGATCAGAAACAATACTGGACACATGGTGATTCTACATACCGATATATTTCTGCTGCAGAGATTGCTGAGGCATTTCAGTCTTTTCATGTCGGTCAAGCAGTAAGAACTGAGTTGGTAGTCCCATTTGGCAAGGGCAAGAGCCATCCTGCTGCGCTGAGAACATCAAAGTATGGTGTTAGCATGAAAGAACTACTTCAAGCTAACATTGACAGGGAAATATTACTCATGAAAAGAAACTCATTCCTCTATATATTCCAGGCAATTAGGGTGATTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MDGGGGETYGYGGGRREGGWAWLAAAAAAADGVFSRSSSSAREDDEEDLRWAALEKLPTYDRARTALLALLPDGELREVNVRRLAADEQRALLERVAGVADDHAGFLCMFKERLDRVGIKLPTIEVRYENLNVEAESYVGSRGLPTIFNTYANIFEAATTGEHKAEVVTNHILKVTSRKDQKQYWTHGDSTYRYISAAEIAEAFQSFHVGQAVRTELVVPFGKGKSHPAALRTSKYGVSMKELLQANIDREILLMKRNSFLYIFQAIRVIL</aaseq>

Gene Sequence

<dnaseqindica>1..347#4073..4193#5887..5940#6642..6935#ATGGACGGCGGCGGCGGCGAGACCTACGGGTACGGCGGCGGACGGCGGGAGGGCGGCTGGGCGTGGTTGGCGGCGGCGGCGGCGGCGGCGGACGGCGTGTTCTCGCGGTCGTCGTCGTCGGCGAGGGAGGACGACGAGGAGGACCTGCGGTGGGCGGCGCTGGAGAAGCTGCCGACCTACGACCGAGCACGGACGGCGCTGCTGGCCTTGCTGCCGGACGGCGAGCTGCGGGAGGTGAACGTGCGGCGGCTCGCCGCCGACGAGCAGCGCGCGCTGCTGGAGCGCGTCGCGGGCGTCGCTGACGACCACGCGGGCTTCCTCTGCATGTTCAAGGAACGTTTGGATCGGTAAGGCCAAATTAATCGATTAGTACCACCAACCGCGGTACTATAAAGATTATAAAGTCACGTAACGCTTTTTTAATTGGGACTATAAATGAATTTTTATATGTTCTACTTTTTAATCGGGACTATAAATGAATATTTTATGTTCTGCCTTCAATTCAAATCGAAATTAATGTGATTTTTACATGACCCATAAAGATCACTTCTCTGGTAGCAATCATTTTTATACTAGGACGGGTAATCAGTCAGAGGAGTGCTCAAGCGTGTAGCCGAGCTCTATCGTGCGCGGTTTCTCTGCTATTTTTTGCGATTACGTACACGACGTTGAACACACCCCACACACACCAACACGTACCGTTTCCCCGTAAATTATATGCGCTCAAGGACTATATGTAGTTTTGAAAATTTAAATTTGGTGGTATATTTTTGAAATTGTGTTGCAGGTTGCACCGTACTTGTACTTTTAGGAATTAAACAGTACCAAAAGTGATGATCCATAGCACGGAATTTTTTTAAAATAAACTTATGAGTGTATCTTGTAAGTTAATTCAATGATTAATTTTCATGTAGTCAGTTCATATGCTTCTATATTTATTTGGTCATCTCCACAGGTGCAGTATATTTTGGATAGAAAAAAAGTTAAAGTAAATTCCACTTTATGCCACCTTGTATTACCGTTTGTTTTGCTTTGGATTATCCTTTAACCAATGTTATTACTTTGGATTAGTCCCAACTATTTTATCTATCTACATTAGATTTATTGTGTGTCAAATAAATGGTCTACATTCCCCAAAAAAAAAAGAAATAGTCTACATACAGTTGTGGAAGTTTATTGACAAGTAAAAACCAACGTATTGGAGATTGTTCATATGCTTGAGAAGAGAGTCGGGATGGTCCAATGTGAACCAAAGGCAACATTATCCGGTCCAAAGTGAAAACATTGATGAAAGGCAATTTAAAGCAAAACATCGGTAATAAGAGGTGACCCAAAGTGAAATTTACTTTATAAAAAACATATCCTTTTGTGTTCCTATATTTTTTTAAAATCAATAATTAAGACCAAGATGATCCATGTTAAATTAATTTTGAAACTTTTATTTCCAATCCTCAATTGGAAAATGTTTCCTATTGTTTTCTTGATAATGGAATATAACATCCCGGCCTTTCTTCAAAAAGAGCTACAACCAATTATTACAAAGTAGCATCCTAGAAAAGAGTGTAGTTCAGATAAAAAGAACACGCCAAACAAAAACAAAGGAAACCAAGCCAAAATAAGGAGAACACATTTATTGAAGTCTACTTGTGAACCTCCACCTATGATTGGCAAATAGTTGAATAACCATCGACTCCAACTTGCGGCACGTAACTTTTAGGAACTCCCCGTCATCCTCACATCTTTATAGTTGTACCCAAAACCGGAGCCAGTGCGTTGCCCTGAAATTACTTGCATATAGGAAATAGATGGTGATTTGTCAAAAACCATATCATTTCTACTCAACCATATAACCAAACAAATGGCAGAAGCTCCAACAAGTATCAGTTTACTTTTTTTCTTGTCAACCCCTAAAAGCCATCCATAAAAAATATGAGATATATTAGTTGGAAGGTTAAAACCAAAAGAAAACTGAACTGCTCTTCATATGAACTTTGCATAATGACAATCCATAAACAGATGTTGAATAGAGTCATTTTTCATACAAAAGCAACACCTTAAGCTACCATTCCAATTCCGTCTTGCCAAATTATCCTTGGTTAACACAACCCCCTTAAGCAAGTACCACATAAAGATCTTAATCTTAAGCGGCATCTTAAGTTTCCAAATATAGTTGTTCTTCTCAACATAACCATTGTTAATTAAAGCTAGATACATTGACCTTACTGAGAACCTACCATTCTGATGATAATTTCATCTAAAACAGTCAGAAGAAAGATTCAATTGAATATGTACAATAGAAGCACACAATTCATGCCAGTATATAAGATTCTTACCAACTAAAGCTCTTCTAAAAGAAACATTAAGCGGAACAGATCCCATAACAGTGGCAATAGAGGATGATTTCCTTCGGACTATAGCATATAAAGATGGATATTTATCCTTCAAAGCCAAGTTACCTAGCCATTTATCTTACCAAAATCTTATTTGTTCCCCATCATTCACGATACAAGAACCCATATCTAAAAAAGTACTTTTGACTTTCATAAGCCTTGACCAAAAATAAGAATCACCTTGTTTCTTGTCAACTTAGGTTATAGATTTATTATAAAGATACTTCCTCTTCAATAAGTCCTGCCAAACCCCTCCCTCATTTATTTGCTTGTACAACCACTTACTCAAAAGACATTTATTTTGTAATTCCAAATTATGAATTCCAAGGCCTCCTTGATCCTTAGGTTGGCAAATGATATCCCATCTAGTGAGTCTGTACTTTTTCTTATGATTATCCCCTTGCCGAAAGAAGCATGATCTATAATAATCAATTTTTTGGAGAACCCCTTTCGGTATCTCAAAGAAAGATATCATAAACATAGCTAAACTCGAAAGTACAGAATTAATCAAGACCAACCTTCCCCCGACAGATAAATGTTTACCTTTCCAACTACTAAGCTTTTTCTCAATTCTTTCTTCAATTACTTTCCAATCTTTATTAGAAAGTTTCCTAAAATACATTGGAATTCCTAAATACTTAACAGGAAAAGAACCTAACTTACAACCAAAGATATTGGAATATTGATCATAACACTCCTTTGCCTGACCAAAATAAAATAATTCACTTTTTTGAAAATTTATTTTTAAGTCAGATAGCTTTTCAAAAATAGATAAAATCAATTTCAAATTCTTTGCCTGTTGCAAATTATGTTCCAAAAAGATAATGGTATCATCTGTATATTGCAATATAGACAAACCATCATCCACTAGGTGAGGAATAATCCCTTTTAAGAGACCCACCTCTTTAGCTCTCTTAATTAACAGAGCAAGCATATAAGCTACTATGTTAAAAAGGATTGGTGATAAAGGATCTCCTGCCTAAGACCTTTATATGTTTGAAAATTGTTACCAATTTGATTATTTACTTTTATACCAACATGACCACCTTAAATAAAAGAAGCTATCCACTCACAACATTTAGGAGAGAAGCCCTTCATCCTCAACATCCTCAACGTCTGTTGTACAAAGGACCATTTTACTTTATCATAAGCTTTTTCAAAATCAATCTTAAAGATTACACTGCTTTTATCTTTATGATGTAATTCATGCATAGTCTCATGTAAAATAACCACTCCTTCCATAATATTCCTACCTAGAATAAAAGCCGTTTGAGTGGGACTAATAACTTTTTGAGCAACCCCCATTATTCTATTCGTTGCAACATTGGTAAAAATCTTAAAACTAACATTTAGTAAACATATGGGTCTATACTGTTGAATCTTAATGGCATCAACACACTTAGGTAACAGAATTATTGTGCCAAAATTAAGAGAAAACAAAGGTAGAGTACCCTTATGGAAATAATTAGAAAGCTCCAACAGATCATTTTTAATAACATTTCAAAAAACTTGGTAAAACTCCGCCGGGAAACCATCCGGACATGGTGCTTTATTATGCTCCATATGGAAAATAGCCTCCTTAATCTCCTTTTCAGAGAAAGGTTGCGTTAAAGCTTCATTCTCCAACTGAGAAAGGTTTCTTATCAATTCTCCTTTTCAGAGAAATGTTTTCTTTTGTGCAGGGTTGGAATCAAGCTTCCGACTATTGAAGTGCGGTATGAGAACTTAAATGTGGAAGCAGAGTCATATGTTGGCAGCAGAGGTCTTCCCACCATTTTCAATACCTATGCTAACATATTCGAGGTATCTGCATCTACTTTGAGAAAATAACTATGTTAATAATTAAAACACCTGTCCATCTATATGTCGGAGGTCCAAATTATAACAATTTATTTAGATTAAAACGAGCTCCACGCCGAATACAACATGATAGTCTTTAATTCCTAATTAACAATTAATAATTTCGAGCATATAGAAAGCAAATGCATGCATCTATTTGTTGGAGTGAATTATAATGGTTTGCATGAAAACGAAGACTTCATTAGCAGATAAATTTCGAATTTAGTTGTTATGAAATATTAATCCATCTTAGCGATGATTATTTTTAAATACAGATTTTCTGAATTCACAATTATGACTTTCACGTTCTATATGAATTGATTGCTAGTCATATAAACATCATATATTTTCACATATACAAATTTAAAATCAATATTTCGCAAGTTTGAAAAATGGTTAATGTACGTATATTTAGTCCATTTGTAGACGTTCCAAATTAATTGCTAAAATAAAAAAAAGTGTTTCAAAATTATTATTTATGGGAAACGGACGGTTTAATATTTTTTTAAATAATATGTACACATATATTCGAACAAATAGTTCCAGAAAACAAAAAACTGATCTATATATAAATATGTTTTTATATGTCAGAAAGTAATCTAAAAAACAGAAAACTGGTCTATATTCAATCGAAGTCTTGATATTTTAACAAAACCAAAAAAATATGAGAAATCCAAGAATGCGCCTAAGTTTTTTTTTTTTTTGGAAATTGTGCCAATTTCCTCAAGGAATCCAGAAAGATTTGACTACCTGTAGTTACGAGACTAAGCATGCAGAGGATGGGATTTTCATTTCATTTTATATGATTGCATTAGCATCCTCTATTTTCCATGTGTAGTGACAACACTCACCTCCAAACAGGGCCTGGGGAACGCTCTTCACATAACACGAAAAAAGAAGCAAAAAATATCGATCCTTCACAATGTGAGTGGGATCGTAAAGCCTCACAGGTAAATTCCTAGTAATTGATTGTTTCCAAATAATTTATGTGATATAAGTTAACCTTATCTGTTGTTTTCAGAATGACATTGCTTTTAGGTCCTCCTGGCTCAGGAAAGACATCACTACTGATGGCCTTAGCTGGAACACTCCCATCAACTGTAAAGGTACATCTTTCATGCTTTCCTATGTAGTATGTGGCTCACCTATATATAGGGCTGTTTGAAGTACTGATATGATGAAACACTGCAACTACAAAAGGTATCAGGGACTATAACTTATAATGGTCATACAATGGATGAATTTGTGCCCCAAAGATCAGCAGCTTATGTTAGCCAACATGATTTACATATGGCTGAACTAACGGTTCGTGAGACGGTCAGTTTCTCTGCAAAGTGTCAAGGAGTTGGCCATCACTATGGTAAGATATGGAAATGGCGAGTTTGAGACTCATTAATCATAAATGTCATATCAGATCAAAATATTAACATTTTTGTACAAAATGTTCAGATATGCTAATGGAACTATTGAGAAGAGAAAAGGAAGAAAACATCAAACCAGATCCAGAGATTGATTTATATTTGAAGGTACGATGCAACTCATAAATCGCAACTCACCTCAACCAGAGTTGAGTTATGCTTAGTTGTTTTTAAGCATCTATTGATGTTCTGACATAAGATTTGATGAGGAACATTAATTTCTCATTTTGCATATGCAGGCTGCTACAACAGGAGAGCATAAAGCCGAGGTGGTCACAAATCACATACTAAAGGTGAATGAGCATTATGCACTTGTATTGAAATGTTTTTTAATTTACAATAAATTCATAGTTGAAAATTGCAAGTCATTCCCATGTAATTTGACATGTACGCGCCATAATAATTCTTTACTGTGTTTTTAACCATTGAAGATCTTGGGATTGGATATATGTGCTGACACAATCGTAGGAAATAATATGGTGAGAGGTATATCAGGAGGGCAAAAAAAGCGACTAACTACAGGTAATTTATTATTGGAGTTAATAAATTGGCATATGGTGACAAAAGCTAATCCACCTCCTAATATTGACGCTACAGCGGAGATGCTGGTAACACCAGGACGAGCACTTTTCATGGATGAGATATCAACTGGACTTGATAGCTCGACAACATTCCAGATTGTGAACTCCATCCGACAGACTGTTCACATTCTTGGTGGAACGACAATTATTGCATTGCTACAGCCTGCGCCCGAGACATATGAATTGTTTGATGAAATAATTATCCTCTCAGATGGTCAAGTTGTCTACAATGGCCCTCGTGATCATGTGCTTGAGTTCTTTCAATCGATTGGATTCAAATGCCCTGAGCGAAAAGGTGTCGCTGACTTCTTACAGGAAGTTAGTTTCCTCACTGATTTCCATCATGATAGAATCATAGGATTAAATTTGATCTGAATGCTTAAGTCTGACTTATTATATGTGAAATGTGATAGGTTACATCAAGGAAAGATCAGAAACAATACTGGACACATGGTGATTCTACATACCGATATATTTCTGCTGCAGAGATTGCTGAGGCATTTCAGTCTTTTCATGTCGGTCAAGCAGTAAGAACTGAGTTGGTAGTCCCATTTGGCAAGGGCAAGAGCCATCCTGCTGCGCTGAGAACATCAAAGTATGGTGTTAGCATGAAAGAACTACTTCAAGCTAACATTGACAGGGAAATATTACTCATGAAAAGAAACTCATTCCTCTATATATTCCAGGCAATTAGGGTGATTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029961