Os10g0547200

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0547200| Description = Harpin-induced 1 domain containing protein| Version = NM_001071828.1 GI:115483251 GeneID:4349292| Length = 1081 bp| ...")
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Gene Name

Os10g0547200

Description

Harpin-induced 1 domain containing protein

Version

NM_001071828.1 GI:115483251 GeneID:4349292

Length

1081 bp

Definition

Oryza sativa Japonica Group Os10g0547200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21862185..21863265

Sequence Coding Region

21862506..21863234

Expression

GEO Profiles:Os10g0547200

Genome Context

<gbrowseImage1> name=NC_008403:21862185..21863265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21862185..21863265 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgacgaggaggcgagggatcgcggagggggggcacgccacccgggcggccgtggtccggtgcatcgtcgccgcgatactcgccgccatcgtcgtcgccggcctcgtcgcgctcgtgttctggctcgtcgtccgccccaagcccatcgagtacaccgtcaccagcgccgccgtgcgccacctcaacgtcacgccgcgcgaccgcggcccgggctgcagcgcccccaccgtcaacgccaccttctacctcaacgtcacgccgcgcgaccgccgcccgggctgcagcggccccaccgtcaacgccaccttctacctcgccctcgccatcgacaaccccaaccgccgcgtctccatgcgctacgaagacagcgtcgcgctccgcgtgctctacggcggctccgagctggagctcgccgccggctacgtcgtgccggggttccaccagccccaccgcaacgagacgacgctgccggtgcgcgccgtggcgcgctcggcgccgttcccggtcccggtcacggacctggtcgcctgggagctggagcacgacctcgccgccggcgagctgagcgtggacgttgaggtgaccacgggcgtccggttcatagtcggcggcgtcgcctccaggtactaccaagtcaatgtgacctgctcgccggtgaacatcggcttgtcgccgtcggcggcgcggtccttcaacagcgtgccgtgcgacgtcgagatctcgtga</cdnaseq>

Protein Sequence

<aaseq>MPTRRRGIAEGGHATRAAVVRCIVAAILAAIVVAGLVALVFWLV VRPKPIEYTVTSAAVRHLNVTPRDRGPGCSAPTVNATFYLNVTPRDRRPGCSGPTVNA TFYLALAIDNPNRRVSMRYEDSVALRVLYGGSELELAAGYVVPGFHQPHRNETTLPVR AVARSAPFPVPVTDLVAWELEHDLAAGELSVDVEVTTGVRFIVGGVASRYYQVNVTCS PVNIGLSPSAARSFNSVPCDVEIS</aaseq>

Gene Sequence

<dnaseqindica>32..760#atagcatcgatcgccagttcgccacagcacaatgccgacgaggaggcgagggatcgcggagggggggcacgccacccgggcggccgtggtccggtgcatcgtcgccgcgatactcgccgccatcgtcgtcgccggcctcgtcgcgctcgtgttctggctcgtcgtccgccccaagcccatcgagtacaccgtcaccagcgccgccgtgcgccacctcaacgtcacgccgcgcgaccgcggcccgggctgcagcgcccccaccgtcaacgccaccttctacctcaacgtcacgccgcgcgaccgccgcccgggctgcagcggccccaccgtcaacgccaccttctacctcgccctcgccatcgacaaccccaaccgccgcgtctccatgcgctacgaagacagcgtcgcgctccgcgtgctctacggcggctccgagctggagctcgccgccggctacgtcgtgccggggttccaccagccccaccgcaacgagacgacgctgccggtgcgcgccgtggcgcgctcggcgccgttcccggtcccggtcacggacctggtcgcctgggagctggagcacgacctcgccgccggcgagctgagcgtggacgttgaggtgaccacgggcgtccggttcatagtcggcggcgtcgcctccaggtactaccaagtcaatgtgacctgctcgccggtgaacatcggcttgtcgccgtcggcggcgcggtccttcaacagcgtgccgtgcgacgtcgagatctcgtgaggcaaccaaatgcatgcatgtttccgtgtccgaccaaagtgatcgtttagtttggattggatttgtttatattttacagcacacgatctactatacttttgatacgtactacctccgttccaggttataagactttctaatattatccacattcatatatatgttaatgaatctaggcatatatatgtgggtaatgctaaaaagtcttataatatgaaacggatgaagtatttgcgaggttgtaaatttagctctagttggagtggccttcttttcttcatcatctcttttaggggattatttatttatttattacgcgat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0547200, RefSeq:Os10g0547200