BGIOSGA029980

From RiceWiki
Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029980| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029980, complete gene.| tag = OsI_308...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029980

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029980, complete gene.

LocusTag

OsI_30899

Ensembl Transcript ID

BGIOSGA029980-TA

Ensembl Protein ID

BGIOSGA029980-PA

Length

3168

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8383215..8386382

Sequence Coding Region

8386183..8386382,8383827..8385724),complement(8383215..8383570

Genome Context

<gbrowseImage1> name=IndicaChromosome09:8383215..8386382 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:8383215..8386382 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCTCCACCGGCGGTTGCTCCACCTCGCCGTCGTGTTCGCCGGCCTCCTCCTGCCGGGCGTCCGCGCGGGCACCGGCGGCGCCGCCTCCGGCGACGCGGGCGCGCTCCTCGCCGCCAGGGCCGCGCTCACGGACCCGACCGCCGCGCTCTCGGCATGGCGCGGCGACGACCTCTGCCGCTGGCCGCACGTGGCCATCCCTCCTCTCCGTCGGGAAGCTGACCAACCTCGTCGATCTGGACCTCTCGAGCAACAACCTCACCGGCGAGATACCACCGAGCATCGTGAACTTGAGTTCTTTGGTCCAGATAGAGCTCTTCTCCAACCAGCTCTCCGGCAGGATTCCGGCGGGGTTGGGCGGCCTCAAGAAGCTCCAGCAACTGGACATCTCGATGAACCACATCTCCGGCGAGATACCGGAGGACATGTTCGCCGCGCCGAGCCTGGAGAGCGTGCACATCTATCAGAACAACCTGACCGGGCGGTTGCCGGCGACGCTCGCGGCGGCGGCGAGGCTGACCGAGCTGATATCTCCGCCAACCAGATCGAAGGGCCGTTCCCGCCGGAGTTCGGGAAGAACTGCCCGCTCCAGTCGCTGGACGTCTCGGACAACCGCATGTCCGGCCGGATTCCGGCGACGCTCTGCGCCGGCGGGAAGCTGAGCCAGCTCCTGCTGCTGAACAACATGTTCGACGGCGCCATTCCCGACGAGCTGGGGAAATGCAGGTCGCTGATGAGGGTGAGGCTGCCCTGCAATCGGCTCTCCGGCCCGGTGCCGCCGGAATTCTGGGGATTGCCCCATGTCTACCTGCTCGAGCTCCGTGGCAATGCGTTCTCTGGCAATGTCGGCGCCGCCATTGGCCGTGCCGCGAACCTGTCCAACCTCATCATTGATAACAATCGATTCACCGGTGTTCTTCCTGCTGAATTGGGGAATTTAACCCAGCTGGTGGTGCTGTCGGCTTCGGACAACAGCTTCACCGGGACAGTGCCGCCGTCACTCGCATCTCTTTCGGTGCTTTTCCTGCTTGATTTGAGCAACAATTCCCTTTCTGGAGAGATCCCGCGCAGCATCGGAGAACTGAAGAATTTGACATTGTTGAATCTTTCAGACAACCACCTCAGTGGTAGTATACCTGAAGAGCTTGGGGGTATGGATAAGATGAGCACGCTTGATTTGTCGAACAATGAGCTTTCTGGTCAGGTGCCTGCACAATTGCAGGATCTGAAACTGCTGGGTGTTCTTAACCTGTCCTATAACAAGCTCACTGGGCATCTTCCAATCTTATTCGACACTGATCAATTCCGACCGTGCTTCTTGGGTAATCCTGGCCTGTGCTATGGGCTATGTTCAAGGAATGGTGATCCTGATTCCAACCGGCGTGCCCGAATCCAGATGGCTGTAGCCATCCTCACAGCTGCTGCTGGCATTCTACTCACGAGTGTTGCCTGGTTCATTTACAAGTATAGGAGCTACAATAAGCGCGCCATCGAAGTTGACAGCGAGAATTCAGAGTGGGTACTCACATCCTTCCACAAGGTGGAGTTCAATGAGAGGGACATTGTGAATAGCCTGACTGAGAACAATTTGATTGGCAAGGGTTCATCAGGGATGGTGTACAAGGCTGTTGTCAGGCCTAGGAGTGATACCTTGGCTGTGAAGAAGCTTTGGGCAAGTAGCACGGTGGCGAGCAAGAAGATCGACAGCTTTGAGGCCGAGGTGGAAACATTGAGCAAAGTTAGGCACAAGAACATTGTCAAGCTCTTCTGCTGTCTTACGAACGAGGCATGCCGGTTGCTTGTCTATGAGTTCATGCCTAATGGCAGCCTGGGAGACTTTCTCCACAGTGCCAAAGCTGGCATCTTGGATTGGCCTGCGAGGTACAACATCGCACTCGATGCTGCTGAGGGGCTCAGCTACTTGCACCATGACTTTGTTCCCGCGATCATCCACCGAGATGTGAAGTCAAACAACATTCTGCTTGATGCTGATTTTCGTGCCAAGATAGCAGATTTTGGCGTCGCGAAGTCTATTGGTGATGGGCCGGCCACCATGTCTGTCATTGCTGGTTCTTGTGGATACATTGCTCCTGAGTATGCCTACACTATACGTGTAACTGAGAAGAGCGATGTATATAGCTTTGGTGTGGTCATGCTGGAACTTGTTACTGGAAAGAGTCCCATGTCATCCGATATTGGTGACAAGGACCTGGTGGCATGGGCAGCCACCAATGTGGAGCAGAATGGGGCAGAGTCAGTGCTAGATGAGAAGATTGCTGAACATTTCAAGGATGAGATGTGTAGAGTTCTGAGGATTGCGCTGCTCTGCGTTAAGAACCTCCCAAACAACCGCCCGTCGATGAGGCTTGTGGTGAAGTTCTTGCTTGACATCAAGGGAGAGAACAAACCGAAGGCGATGAAGATTACGGAGGCGCTCCCTGCCACATGA</cdnaseq>

Protein Sequence

<aaseq>MAPLHRRLLHLAVVFAGLLLPGVRAGTGGAASGDAGALLAARAALTDPTAALSAWRGDDLCRWPHVAIPPLRREADQPRRSGPLEQQPHRRDTTEHRELEFFGPDRALLQPALRQDSGGVGRPQEAPATGHLDEPHLRRDTGGHVRRAEPGERAHLSEQPDRAVAGDARGGGEADRADISANQIEGPFPPEFGKNCPLQSLDVSDNRMSGRIPATLCAGGKLSQLLLLNNMFDGAIPDELGKCRSLMRVRLPCNRLSGPVPPEFWGLPHVYLLELRGNAFSGNVGAAIGRAANLSNLIIDNNRFTGVLPAELGNLTQLVVLSASDNSFTGTVPPSLASLSVLFLLDLSNNSLSGEIPRSIGELKNLTLLNLSDNHLSGSIPEELGGMDKMSTLDLSNNELSGQVPAQLQDLKLLGVLNLSYNKLTGHLPILFDTDQFRPCFLGNPGLCYGLCSRNGDPDSNRRARIQMAVAILTAAAGILLTSVAWFIYKYRSYNKRAIEVDSENSEWVLTSFHKVEFNERDIVNSLTENNLIGKGSSGMVYKAVVRPRSDTLAVKKLWASSTVASKKIDSFEAEVETLSKVRHKNIVKLFCCLTNEACRLLVYEFMPNGSLGDFLHSAKAGILDWPARYNIALDAAEGLSYLHHDFVPAIIHRDVKSNNILLDADFRAKIADFGVAKSIGDGPATMSVIAGSCGYIAPEYAYTIRVTEKSDVYSFGVVMLELVTGKSPMSSDIGDKDLVAWAATNVEQNGAESVLDEKIAEHFKDEMCRVLRIALLCVKNLPNNRPSMRLVVKFLLDIKGENKPKAMKITEALPAT</aaseq>

Gene Sequence

<dnaseqindica>1..200#659..2556#2813..3168#ATGGCGCCGCTCCACCGGCGGTTGCTCCACCTCGCCGTCGTGTTCGCCGGCCTCCTCCTGCCGGGCGTCCGCGCGGGCACCGGCGGCGCCGCCTCCGGCGACGCGGGCGCGCTCCTCGCCGCCAGGGCCGCGCTCACGGACCCGACCGCCGCGCTCTCGGCATGGCGCGGCGACGACCTCTGCCGCTGGCCGCACGTGGCGTGCGACGCCGCGCGCCGGGAACGCTGCCGTCTCCGACGGCGTCGTCGCGGGGCTCTACCTCGGCGGTCTGTACCTCGCCGGGGGGTTCCCCGTCGCGCTCTGCTCGCTTGCGGTCGCTGCGGCACCTCGACATGTCGTCGAACGACCTCACGGGCCCGCTTCCCGCCTGCCTCGCGGGGCTCCAGGCGCTCGAGAACGCTCAACCTCGCGTCGAACAACTTCTCCGGACGAGCTCCCGCCGGCCTACGGCGGCGGGTTCCCGTCTCTGCCGGTGCTCATCCTGACTACCGAACCTCGTCTCCGGCGCGTTCCCGGGGTTCCTCGCCAACGTAACCGCGCTCTCAGGAGCTGCTGCTCGCCTACATCTCGTTCTCCCCGTCGCCACTTGCCGGACAACCTCGGCGACCTCACCGCGCTCCGCGTGCTTTTCCTCGCCAACTGCTCCCTCACCGCGTAGCATCCCTCCTCTCCGTCGGGAAGCTGACCAACCTCGTCGATCTGGACCTCTCGAGCAACAACCTCACCGGCGAGATACCACCGAGCATCGTGAACTTGAGTTCTTTGGTCCAGATAGAGCTCTTCTCCAACCAGCTCTCCGGCAGGATTCCGGCGGGGTTGGGCGGCCTCAAGAAGCTCCAGCAACTGGACATCTCGATGAACCACATCTCCGGCGAGATACCGGAGGACATGTTCGCCGCGCCGAGCCTGGAGAGCGTGCACATCTATCAGAACAACCTGACCGGGCGGTTGCCGGCGACGCTCGCGGCGGCGGCGAGGCTGACCGAGCTGATATCTCCGCCAACCAGATCGAAGGGCCGTTCCCGCCGGAGTTCGGGAAGAACTGCCCGCTCCAGTCGCTGGACGTCTCGGACAACCGCATGTCCGGCCGGATTCCGGCGACGCTCTGCGCCGGCGGGAAGCTGAGCCAGCTCCTGCTGCTGAACAACATGTTCGACGGCGCCATTCCCGACGAGCTGGGGAAATGCAGGTCGCTGATGAGGGTGAGGCTGCCCTGCAATCGGCTCTCCGGCCCGGTGCCGCCGGAATTCTGGGGATTGCCCCATGTCTACCTGCTCGAGCTCCGTGGCAATGCGTTCTCTGGCAATGTCGGCGCCGCCATTGGCCGTGCCGCGAACCTGTCCAACCTCATCATTGATAACAATCGATTCACCGGTGTTCTTCCTGCTGAATTGGGGAATTTAACCCAGCTGGTGGTGCTGTCGGCTTCGGACAACAGCTTCACCGGGACAGTGCCGCCGTCACTCGCATCTCTTTCGGTGCTTTTCCTGCTTGATTTGAGCAACAATTCCCTTTCTGGAGAGATCCCGCGCAGCATCGGAGAACTGAAGAATTTGACATTGTTGAATCTTTCAGACAACCACCTCAGTGGTAGTATACCTGAAGAGCTTGGGGGTATGGATAAGATGAGCACGCTTGATTTGTCGAACAATGAGCTTTCTGGTCAGGTGCCTGCACAATTGCAGGATCTGAAACTGCTGGGTGTTCTTAACCTGTCCTATAACAAGCTCACTGGGCATCTTCCAATCTTATTCGACACTGATCAATTCCGACCGTGCTTCTTGGGTAATCCTGGCCTGTGCTATGGGCTATGTTCAAGGAATGGTGATCCTGATTCCAACCGGCGTGCCCGAATCCAGATGGCTGTAGCCATCCTCACAGCTGCTGCTGGCATTCTACTCACGAGTGTTGCCTGGTTCATTTACAAGTATAGGAGCTACAATAAGCGCGCCATCGAAGTTGACAGCGAGAATTCAGAGTGGGTACTCACATCCTTCCACAAGGTGGAGTTCAATGAGAGGGACATTGTGAATAGCCTGACTGAGAACAATTTGATTGGCAAGGGTTCATCAGGGATGGTGTACAAGGCTGTTGTCAGGCCTAGGAGTGATACCTTGGCTGTGAAGAAGCTTTGGGCAAGTAGCACGGTGGCGAGCAAGAAGATCGACAGCTTTGAGGCCGAGGTGGAAACATTGAGCAAAGTTAGGCACAAGAACATTGTCAAGCTCTTCTGCTGTCTTACGAACGAGGCATGCCGGTTGCTTGTCTATGAGTTCATGCCTAATGGCAGCCTGGGAGACTTTCTCCACAGTGCCAAAGCTGGCATCTTGGATTGGCCTGCGAGGTACAACATCGCACTCGATGCTGCTGAGGGGCTCAGCTACTTGCACCATGACTTTGTTCCCGCGATCATCCACCGAGATGTGAAGTCAAACAACATTCTGCTTGATGCTGATTTTCGTGCCAAGATAGCAGATTTTGGCGTCGCGAAGTCTATTGGTGATGGGCCGGCCACCATGTCTGTCATTGCTGGTTCTTGTGGATACATTGCTCCTGGTGAGTTCCTTATGCCTAATTTGTTTCTGAGAAGTGTTCCTAATTTGTTTCTGAGAAGTGTTCCTAATTAGAGTATATATGAATGTAGCTTTTGAGATTGATTTGATGATCAGTTCAGACAGTCTTTTTTGGTCCATATGTTCTGATTAGGATTTCTTTTTGTACTTGTGGGTTGTTGTAATTGGCTAAAAATTGTCATAAGTCACCGTAATTTCTTCCTAGTTTCTTATGTGTGTTTGTCTGTTTTGTATCGCAGAGTATGCCTACACTATACGTGTAACTGAGAAGAGCGATGTATATAGCTTTGGTGTGGTCATGCTGGAACTTGTTACTGGAAAGAGTCCCATGTCATCCGATATTGGTGACAAGGACCTGGTGGCATGGGCAGCCACCAATGTGGAGCAGAATGGGGCAGAGTCAGTGCTAGATGAGAAGATTGCTGAACATTTCAAGGATGAGATGTGTAGAGTTCTGAGGATTGCGCTGCTCTGCGTTAAGAACCTCCCAAACAACCGCCCGTCGATGAGGCTTGTGGTGAAGTTCTTGCTTGACATCAAGGGAGAGAACAAACCGAAGGCGATGAAGATTACGGAGGCGCTCCCTGCCACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029980