Os10g0547500

From RiceWiki
Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0547500| Description = Citrate transporter family protein| Version = NM_001071829.1 GI:115483253 GeneID:4349293| Length = 2539 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0547500

Description

Citrate transporter family protein

Version

NM_001071829.1 GI:115483253 GeneID:4349293

Length

2539 bp

Definition

Oryza sativa Japonica Group Os10g0547500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21872573..21875111

Sequence Coding Region

21872641..21873633,21873762..21873951,21874308..21874582

Expression

GEO Profiles:Os10g0547500

Genome Context

<gbrowseImage1> name=NC_008403:21872573..21875111 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21872573..21875111 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctggcgtcgctgccgaaggtggtgatggggtcggtggcgttcggtgtgttctggatgctggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcgggggcgctgctgggcgcggtgctgatgatcgtgttccacgtgatcagcgccgacgacgcctacgcctccatcgacctccccatcctgggcctcctcttcgccaccatggtcgtcggcggctacctcaagaacgccggcatgttcaggcacctgggccggctgctggcgtggcggagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgcgctcgccagcgcgctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtgctcgagctcgccgccgagcgcaacctcccggcgaagccgttcctgctcgcgctcgccaccagcgccaacatcggctccagcgcgacgcccatcggcaacccgcagaacctggtcatcgccttcaacagcaagatctcctttatttccttcctcctcggcatcctccccgccatgctcgccggcatggggatcaacatgctcatgctgctctgcatgtactggaaggagctcgacggcggcgcctgcagccccgacgaggtcgccgccggcaagcagatggaggccatcgaggagggccgccgcacggcgctcaacaacaacaagaaagacgacggcgacgccgccacccccgcatcgccggaggacgacgacggcggcgacgccgagtcgatgatgtcggagaacatctcgacgaagcaccggtggttcatgcagtgctcggagcaccggcggaagctgttcctcaagagcttcgcgtacgtggtcaccgtcggcatgctcgtcgcctacatgctcggcctcaacatgtcgtggaccgccatcacgaccgccatcgccctcgtcgtcgtcgacttccgcgacgccgagccatgcctcgacaaggtgtcgtactcgctgctggtgttcttctcggggatgttcgtgacggtgagcgggttcaacaagacggggctacccggggccatctggaacgtgatggcgccctactcaaagatcaaccacgtcaccggcgtcaccgtcctctccgtcatcatcctcctcctctccaacctcgcctccaacgtccccaccgtgttgttgatgggggatgaggtggcggcggcggcggcgacgatatcaccggcggcggtgacgcggtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatcgtgtgcgagcaggcgaggcgggcgacgcgcaacgcctacgacctcaccttctggaaccacgtcatcttcggactcccatccaccctcgtcgtcaccgccatcggcatccctctcatcggcaagatcaacatctag</cdnaseq>

Protein Sequence

<aaseq>MALASLPKVVMGSVAFGVFWMLAVFPSVPFLPIGRTAGALLGAV LMIVFHVISADDAYASIDLPILGLLFATMVVGGYLKNAGMFRHLGRLLAWRSQGGRDL MCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKPFLLALATSANIGSSATP IGNPQNLVIAFNSKISFISFLLGILPAMLAGMGINMLMLLCMYWKELDGGACSPDEVA AGKQMEAIEEGRRTALNNNKKDDGDAATPASPEDDDGGDAESMMSENISTKHRWFMQC SEHRRKLFLKSFAYVVTVGMLVAYMLGLNMSWTAITTAIALVVVDFRDAEPCLDKVSY SLLVFFSGMFVTVSGFNKTGLPGAIWNVMAPYSKINHVTGVTVLSVIILLLSNLASNV PTVLLMGDEVAAAAATISPAAVTRSWLLLAWVSTVAGNLSLLGSAANLIVCEQARRAT RNAYDLTFWNHVIFGLPSTLVVTAIGIPLIGKINI</aaseq>

Gene Sequence

<dnaseqindica>69..1061#1190..1379#1736..2010#ctctcatcgccaccaccacctcccactccaagacgctagctgcattgtagtgagagagagaggcggccatggcgctggcgtcgctgccgaaggtggtgatggggtcggtggcgttcggtgtgttctggatgctggcggtgttcccgtcggtgccgttcctgccgatcgggcggacggcgggggcgctgctgggcgcggtgctgatgatcgtgttccacgtgatcagcgccgacgacgcctacgcctccatcgacctccccatcctgggcctcctcttcgccaccatggtcgtcggcggctacctcaagaacgccggcatgttcaggcacctgggccggctgctggcgtggcggagccagggcgggcgcgacctcatgtgccgcgtctgcgtcgtcaccgcgctcgccagcgcgctcttcaccaacgacacctgctgcgtcgtcctcaccgagttcgtgctcgagctcgccgccgagcgcaacctcccggcgaagccgttcctgctcgcgctcgccaccagcgccaacatcggctccagcgcgacgcccatcggcaacccgcagaacctggtcatcgccttcaacagcaagatctcctttatttccttcctcctcggcatcctccccgccatgctcgccggcatggggatcaacatgctcatgctgctctgcatgtactggaaggagctcgacggcggcgcctgcagccccgacgaggtcgccgccggcaagcagatggaggccatcgaggagggccgccgcacggcgctcaacaacaacaagaaagacgacggcgacgccgccacccccgcatcgccggaggacgacgacggcggcgacgccgagtcgatgatgtcggagaacatctcgacgaagcaccggtggttcatgcagtgctcggagcaccggcggaagctgttcctcaagagcttcgcgtacgtggtcaccgtcggcatgctcgtcgcctacatgctcggcctcaacatgtcgtggaccgccatcacgaccgccatcgccctcgtcgtcgtcgacttccgcgacgccgagccatgcctcgacaaggtaacccatatccgtccaaatcactataactctaggccacacgagcaagtacacgtggcggccatgcggacaagaagcaatatgtgaactgggtgccacgtgtgcgtggatgtgaatggatgatgcaggtgtcgtactcgctgctggtgttcttctcggggatgttcgtgacggtgagcgggttcaacaagacggggctacccggggccatctggaacgtgatggcgccctactcaaagatcaaccacgtcaccggcgtcaccgtcctctccgtcatcatcctcctcctctccaacctcgcctccaacgtccccaccggtacgtacttactcacaacctttctcgcaccatgctattgctagtacccaatgtgtcccgactcacccagcactaacatttgtactgtacagtacatcagtttcttttaatacatgatatctgacttttttttatcgatgaatggatcttattcaatttcttttgtaaatataaaaagattaaatcagacaataaatcaagtcaaaataaaataaatgtaattatattttttaataagatgaatgattattaaaagaaaaaaattttttttgtctctcataattaaaaaagaacaactcattttttacatgttatttgagtggtaattgtaaattaatttatatatgtgggtgtagtgttgttgatgggggatgaggtggcggcggcggcggcgacgatatcaccggcggcggtgacgcggtcgtggctgctgctggcgtgggtgagcacggtggcggggaacctgtcgctgctggggtcggcggcgaacctgatcgtgtgcgagcaggcgaggcgggcgacgcgcaacgcctacgacctcaccttctggaaccacgtcatcttcggactcccatccaccctcgtcgtcaccgccatcggcatccctctcatcggcaagatcaacatctagtattcattaaattaattaattaatataatccggctagctactatctacaacgatcagaagaaggcagaatgatcgagcatgcaagaattcatgcaaattacaagggatgtgatatgatcatattaatccaaggaagctagtatgatgattaagtttgtgatcaagccgtactatgtgcatgccaatgcatgcatgtgttcaagtgtacactatgcttggtctcaagtggatcaattatattggtgccatgctctgggataattagttaattagtacttatgataagctagagaggaggatgcattatattggtgcatggtaataaggcaaatgaacagcagaatgcatgtatatatgtactgtatccctgttgccagctggtctctgtttgaatgaagttgatagcaacaaagctagcactagcgaatgagctagtgactcaagtacgcatgccggattacctcattgctccaaacttgcaatcagttttgaacttttaataaagttaatttggctttgtgcacttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0547500, RefSeq:Os10g0547500