BGIOSGA029994

From RiceWiki
Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029994| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029994, complete gene.| tag = OsI_308...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029994

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029994, complete gene.

LocusTag

OsI_30869

Ensembl Transcript ID

BGIOSGA029994-TA

Ensembl Protein ID

BGIOSGA029994-PA

Length

3915

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8161067..8164981

Sequence Coding Region

8164721..8164981,8164578..8164642),complement(8163748..8163928,8163444..8163524),complement(8163091..8163216
,8162123..8162202),complement(8161901..8162016,8161659..8161779),complement(8161490..8161545
,8161067..8161188

Genome Context

<gbrowseImage1> name=IndicaChromosome09:8161067..8164981 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:8161067..8164981 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCTACGGCCGCCTCCTCCTTCTCCGCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTCCCCCTCCCACCTCCGACTCCTAGCACGCCGCCACCTCCCGTTCTCGTCCACCGTCTCCTTCTCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGCGTCGCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTTCCGGAAGGTCGACACCTGCAACCGTGGAATGGACAAGAAGGGGGAGTTCGTGGAGTTCATGGTGGAGGATCAGGTTGTGGGGTATATCCACCAAGGTTTTGTCGAACATCTAAGAGACTTCCATGATGTTTTTACCATTGCCTCGGGCAGCAATGGAAACAATAATGTTGAACATGTGACTCTCCATTCATCTCTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGCCTAGGAGATCTGATTCCAGGTATTCGAAATGAGCTCTTTCCAATAACATCATCTTATGGCATGCCTGTTTACTTCTCTCTGGAACGTGCTGCTGCTCCCTTCTTTGGTATAAAGGCTTATGGAGTTCATATGAATGGGTATGTTGAGAAGGAGAGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAACAGACCTTTCCAGGAATGCTTGATCATCTTGTTGCTGGTGGCCTGCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGCGTTGCGGAAGGTGGATCACTTAGCATGGAGCTATGGATGGATAGTTCGTCCCTTATCCTGTATCTTTTTTTTTTCTGGAAAACAGGGGATAGTACTGGATTTGAGTATGAACATAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAATAASSFSAAAAAAARRSSPSHLRLLARRHLPFSSTVSFSAAAPPAAAASFGWEDALRVAADDRRGDESDLSGYFRKVDTCNRGMDKKGEFVEFMVEDQVVGYIHQGFVEHLRDFHDVFTIASGSNGNNNVEHVTLHSSLRTPDERTNAVGSVIRSLGDLIPGIRNELFPITSSYGMPVYFSLERAAAPFFGIKAYGVHMNGYVEKESQKFLWIAKRSDTKQTFPGMLDHLVAGGLPYGISCEENVIKECEEEAGIPRSISSNATSVGAISYMDIEGFRYKRDVLFCYDLKLPPDFVPNNEDGEVDSFRLIPVPHAANIIRRTHFFKPNCNLVIIDFLFRHGYINPDYLGYLKLLQSLRRGVAEGGSLSMELWMDSSSLILYLFFFWKTGDSTGFEYEHK</aaseq>

Gene Sequence

<dnaseqindica>1..261#340..404#1054..1234#1458..1538#1766..1891#2780..2859#2966..3081#3203..3323#3437..3492#3794..3915#ATGGCCGCTACGGCCGCCTCCTCCTTCTCCGCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTCCCCCTCCCACCTCCGACTCCTAGCACGCCGCCACCTCCCGTTCTCGTCCACCGTCTCCTTCTCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGCGTCGCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTTCCGGAAGGTCGACACCTGCAACCGTGGAATGGTGAGTTTCTTGCCCCTACCGTGTCAACCGCGCGCGCTTGAACGCCTCAGGTGTGGATTTTTAGTTGGGGTTTCGCAGGACAAGAAGGGGGAGTTCGTGGAGTTCATGGTGGAGGATCAGGTTGTGGGGTATATCCACCAAGGGTGAGTGCAGTTATTATTTCCAATTTGAGACTAATGTGTTCATAATTCGAATTCTGTCTTCCAAATTTTGCGAATCGTGAGGAACAGCCATTCAGTCAACTCCATGTCAGTATAATCCTTGATCGGATAGAACTCTGCTTTTTCAGCTTATGATCAACCGAGCCAAACAGGATATAAATATCCCTGAAAATGAGGGTATAAATATGACAGATACGGCGGAACATGCGTAATCGTAACTAGTCTCATTGCAGCCTAAAATATTATGGTTGATCTGCATTATTGTTTAAATAATGTGGTCAGTCACACTATCTGATTATGGCTCGTTTATTTGAACTGGCTGCATCTTTTTTCAAGATTTAAGTTGCATACTTGTACAAATTTCGCATCTCTCTGTGTCTAGTTATTTTTGTCCACATAGTAAGTGTAAATGTATGTTTTGTATTGAAATTTCGATATTCTTGTCTGTATGACGTAAGCTCATACCATGACGAGCACAAAGTTTTATTATTTGGTATTCAGTCTCTGCATTGGCAGTGTGGACTATGATGATATTTTACTACTTATCACAATTACAATATTCATGATTCAGTGTATATTTTAGGGTGAGATTGGTTTTACAAGGTTCTTATCTCATTCATGCCAATTTCAGTTTTGTCGAACATCTAAGAGACTTCCATGATGTTTTTACCATTGCCTCGGGCAGCAATGGAAACAATAATGTTGAACATGTGACTCTCCATTCATCTCTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGCCTAGGAGATCTGATTCCAGGTATTCGAAATGAGGTACTCTCCACAATTCAGTATCCAGGTCATTTGATTCTTTTATGAACACGCTTGATTTTAAATTCTGATGCATTTATTGATTTGTTGAATGTTGGATCCTGCATTTTTCAGTTGAATTGCCACAGTTGTCTTTTAAATATTCTTGTTGTTTTATTAGGCCTTATTGGGGACTTCACATTTTCTCTTTATAATCTCGTTCTAATAATATTTTGCAATCTAACAGCTCTTTCCAATAACATCATCTTATGGCATGCCTGTTTACTTCTCTCTGGAACGTGCTGCTGCTCCCTTCTTTGGTATAAAGGTTCTCTGTCATGCTTCCTTATTTTTAAAAGGAAATCTATTATATGCCAGTAGTGTCACCTATCTACATATGTTAGTGAATTGTAGGGAAGTGTTCTACATCCCAAATAGCTGCTCACTGCTAATCATATCTGCCATGTGGCAATTTACTGGCTTTTTTGTTTTTTGATAATTGACATGGTCCAAGTGCTCAATCCTTATCGATGAGATGTTATGTATATATGGCAGGCTTATGGAGTTCATATGAATGGGTATGTTGAGAAGGAGAGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAACAGACCTTTCCAGGAATGCTTGATCATCTTGTTGCTGGTGGCCTGGTGTGCATTTCCATCACTCTGTTTTTTTGGTCCATCTTATTAGCAGTAATTATTTTTCAATTATCATCTTGTTTTAGTAAATTATGAAACTTTAAAACAATTGCATAGGACCTTTTGATGCTTTCATTTCTTCGTAAACAATTAAAGGGGAACTGTGCATATATCAGACCGTAACATTTTAAGCTTCTATTTGATTATTGTCAGATCCAGCCTAAGATTGAATTGGCTGAAGTGTCTGGTTAGTGGTCACTGGTCACCAGTTGTACCACTGGGTCAGCGATCAAACTTCATTTTCCACTATAATATTTATAATGCATGTAATCTCCAAATAAAAAATAATCTATGATAAAATTTCATTATGTTCTGAACGTTGTGGTCATAACCAGCTACATCAGATATATGGAAAAGAAAGTTTCAGCATACTTTGGGCAACATAAACATCCATGTTCTTGCTGGATTTTGTTTTACGTGCAAATGATGTGCCTCAAATGGCCTTAAACTCTTGTCCATATGATTCTTTTGCTCCTAACGTTTTGGGGCATCTTGGCAATTATATACCTGCTAATCTGATGTTCTTGGTAAAGCTTAGATGAGAAATTTCAGCTGGCTTTTGGGACAATAAATTGTAATATCATACTTCTTATTATTTATAATGATGTAGGCTGCATGAACAGGTGGCCTCTTTAGGGTTCATATAAAGTTTCTCTAAAGGGTTTTAATCTGTCTTGTATGTCAAAAAGTCAATTCAATCAAACAGGTAGGGATGTGTTAGTCTCAAATGTGTGGCTCAGTGCTTCGCTCTGACATGTTGTTTCTCTGTTGTGAAACTGAATAGCTAGCTATTAACTTACATTGATTGGTACACTGATTCCCCTTGAAAACTTTTAGCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAAGTAATATGACCGCTGTTGCCTGAAAAATTATAAATTTCTCTGTGATCTTCATCGTGTTTGCCGTGCAAGTACCCATAGTCTAACTCATAATTACCATGTTTGCTAGTGCTACCTCTGTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGGTAAACATTCCCATTTGGCAGAACAAAAACTTGACCCTAACCATATGCTATACTTCTTTGTTCCCTACAAATGGTACTCTAGCATGAAAATATTTAATGAATCTTCTACCAACTCTTGCAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATCACGTGCATATTATATTCTTCTTTTGTTCCTCGCAACCAAAAAATGTAATTCCTTGTTCTATCATTAACAAAAGTTTCTCACATGCTGTCTTGATAATATCCCCTTTAGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGATTGCTCGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATCTTAAATTCAACACTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCACATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTTTGCCCAACAAGTTCAGTGTTTGATTTGCTTAATCGAATTTGTGATGATGGACACCAGGCGTTGCGGAAGGTGGATCACTTAGCATGGAGCTATGGATGGATAGTTCGTCCCTTATCCTGTATCTTTTTTTTTTCTGGAAAACAGGGGATAGTACTGGATTTGAGTATGAACATAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029994