Os10g0547950

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Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0547950| Description = Similar to Short-chain dehydrogenase Tic32| Version = NM_001189330.1 GI:297727790 GeneID:9269206| Length = 4223 bp| ...")
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Gene Name

Os10g0547950

Description

Similar to Short-chain dehydrogenase Tic32

Version

NM_001189330.1 GI:297727790 GeneID:9269206

Length

4223 bp

Definition

Oryza sativa Japonica Group Os10g0547950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21890433..21894655

Sequence Coding Region

21892621..21892863

Expression

GEO Profiles:Os10g0547950

Genome Context

<gbrowseImage1> name=NC_008403:21890433..21894655 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21890433..21894655 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctgcaggtgcgtcgagcggcatcgggctggagacggcgcgcgtcatggcgctgcgcggcgtgcgcgtcgtcatggccgtgcgcaacgtcgccgccgggcacagggccagcgaggcgatccgggctgagatccccggcgccggtatccatgtgctggagatggacctcagctccatggattcggtgaggagatttgccaccgagtttgaggctctgaacctacctctcaacatactcatgtaa</cdnaseq>

Protein Sequence

<aaseq>AAGASSGIGLETARVMALRGVRVVMAVRNVAAGHRASEAIRAEI PGAGIHVLEMDLSSMDSVRRFATEFEALNLPLNILM</aaseq>

Gene Sequence

<dnaseqindica>1793..2035#gggcgagacgtttgaagaaggcgaggcacacgtctcggcgttttcctccgttcggcagcacaaccagaaccgtctccggtctctccttcccggcgatgcccatggcgacgacgaagggtgctcgcgacggaagagagggttcgtaggatcagcgaactcctcaggcgaaaagagagaagaaaatagtactatcactcagcctcgacgcgtcgaggaccaccatctgttaacctgttggtggggtgggtggctctttgcaggagacgttggaacttggaagtccacggcaccgtcgacggcgaggcgatcgggcggacggaggaggaggcgcgccgctgcgccgggctccggcttcagagcgtatgacccgccggatccgttgtgttgtctgtccgtgcccgccaggtgttcgatacaatgccccagtgcgctttgcttcccttctggtaagaaaaaaagtttgcgacctaagacaaatgggtacgtcatttataatgctgtttcaaaggtttaggcaactcaaatcaccaaatagatgattggatgtagagtgaagaagaagaattgttataaagggtgatgcttttggaagccagtacatacttctgagttagtatacccgttttcttcagaaatgaaattccacttcgtcaacggtaagctcttatatctactcaatactagaatgtactagtatttcgttttggatttggattctagtaattggattactcacaagaaatgatgggacaccagatatatactactactatatgactttgaagaaaaaaaatgataatttgatatactttgtccaccggttgacattggcacacctggaacttggaagtggtttgtgatttgacaatcaatatcagcatctccattgccatcggctacagttgtaacttggaagcggtttctagtttgtcaatgcatatcagcatctccatcgccatcggctgcagtttttcctccatactgtcgtctgtagcatgctgaagagcattattcttttgcacccagccacccacagagctgtagctgaacagaaaaccagcaccccacctcggctttacttctctgctctgctcatcggctgtgtgaggtgttcttatcttattgaagtcttctgggaatttatggtataaaaacaatatctttagtactttggtagagtaacaagctgaaactgctgtggccacatcacattctctcactgtcagagtctaaccatataatttcaggccatctggtgccgaagctgaactcagcttgcaaacaccagtacgccactattccctgagctcgacgtacgccagcttggtacggagtcggcgatgtgctggttcaaccgcaaaggcccctccggcttctccggcgcctccaccgccgaggaggtcaccgccggcgtcgacgctcggggcttggtcgccgtcatcacaggtacggatatgatttttttttgaacgactcgcgcaaagatggtgcgaagttctattatcacaggcaggggcggagctagaacaaaatgaaaggggttccactcgcttgctttactctggtttgaatcaaatttagcttgatatgagtgaaactgacggggtatatatatggtgaaaataaataagctatagttaaattttttttaaccagttcctgggcacccccttagctatactagctccgcccctgatcacaggtacgaatatgatgctgctgctggtctgctgccatgccatttagctcacggtttcgacgttggccagaaaaattcagagtgggctgatgagctgcaggtgcgtcgagcggcatcgggctggagacggcgcgcgtcatggcgctgcgcggcgtgcgcgtcgtcatggccgtgcgcaacgtcgccgccgggcacagggccagcgaggcgatccgggctgagatccccggcgccggtatccatgtgctggagatggacctcagctccatggattcggtgaggagatttgccaccgagtttgaggctctgaacctacctctcaacatactcatgtaagagcaagaatctgaacgcttcttctatatgtactccctcctccgtttgttttagcagatgatgccgtttacatttgacatgacgcttgactatttatctatttaaaataccatttattttgttataacttgttttaccatcaaaataatttttttagggaaaacaacactagattgtgtcttttcattgagtatagcagaagaaaaaacaatccttagaagcaagaaaagtgaaaaactttgtacactttaaaataacttttaaggattgactcatattttttatatttgtactaaaattttttcaataagatgaacaaagtcaaatgtcatgtcaaaatttaacaccatcatctattaaaagccggatggagtattattattttgtcaacttaaataataaatttttaactgtggttataaacagtaataatgctggaatcatgacaaggaactgcacacgctccattgacggcctggaattgcaatttgcaacaaatcacatcggtacgagaaattacacagcatttcttcatgcatctcaatcttattaacggattagctgcttgagtgatttggttaattcttgagactttctgggttgtgagaggatgctcatagtgcactaactgttgacttgaatgacaggccactttcttctaacaaatctcttgctggagaacatgaagaggacaagtagcaaaactggtgttgaaggaaggatcgtaaatgtgtcgtcttcagcacattttgtgacctatcctaaagggatatgtttcgataaggtgaaggagccttcaaggtaattaattctgagattctaaaaattaggactggacaccccattttcgtatatgacacatactagatatcatatggataataacaaaaacaacccaattttacattagtgggtagtgcacaaggagatgatttcctgctgtctgtgggagaactggatgatctattctttttctttgaattaatgttaaatttttgactgtttaatataagaatttttggctttttatcatccaaaaattagcgtaaggtccccttatcaagggagctccaattagtaaagataagtatatttattacgcagtatgcactcaacttattagataatattaagcacttaacttttcttaccagattcatcagtcttattgcttatggccagtctaagcttgccaacattttgcactcaactgagctgtcacgagttctgaaggtagtagcttatgcctaaatttcgtatgtaatctctgatcatatatattatatgtcaaatcaatggagaataaccgggaaaccgttgagtatgaacaggaagatggtgtgaacatttcggctaatgcagtccatcctggtgttgttacaaccaacctgttcaggcacaggactattataaatggtaattcccaaaccattcagaacaaaattttggagtgtaattagaattttggaacaattagtacttgaagaagcacatactccataatgccaatttaggatgatccccaaccattttgattactggtaaacacaacgaacaatgctgcttataaatataatatttcttaactgttcttgtgcattggttctctcttgcagctctagtgaagtccattggaagattcgtacacaaaactgtagaacaggtgactttttttaaaaaaagtatatgttcgtgcgttgtaggtgtggaacatattatgtgtttctaacctcatggttttattgtatagggtgctgcaacgacatgttatgtggcactacattctcaattcaccgggataagtgggaagtacttcagcaactgcaatttagataccccaagctcacaggcttcaaatgcagagttggcaaataaactatgggaatttagctccaagattgtgtcctcttgatgtggctatcaaattatagtttgtgttatgcatcatgtgctacagtctattttctgcaagtttgaacataaaattttcacataaacaaacaaagagatccgtgcaattcctccaagactagttagaacaatctgaattgtaatatatccgcctcagtttagtttagaagttcttcctataatcatgggctggctctggctatgtatttcttaaactaatgtttggactttggaggcccacctcacctctttatgtaagccttacgcttcatggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0547950, RefSeq:Os10g0547950