BGIOSGA030011

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030011| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030011, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030011

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030011, complete gene.

LocusTag

OSJNBA0057D11.25-1

Ensembl Transcript ID

BGIOSGA030011-TA

Ensembl Protein ID

BGIOSGA030011-PA

Length

6439

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7580822..7587260

Sequence Coding Region

7586868..7587260,7585965..7586099),complement(7584291..7584479,7584035..7584096),complement(7583538..7583695
,7583316..7583464),complement(7581154..7581294,7580822..7581004

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7580822..7587260 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7580822..7587260 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGCGGGGCCACCACCACCACCTGGCGGAGGTGGCCCTCCTCGCGTCGGCCTCCGAGGACCTCGCCGCCGTGGGCGCCGGCGAGAGGGAGGGGTGGCTCGACGACCCCGCCGTGCTCCCCTCCCTCGCGCCGCGCGCGCGCGCCCTCGCCGTCGCCAGCGCGGCGAGGTCCGTGCTCGCGGTTGTCCCGGTCGCCGGAGTAGGCGGTGGGGTCACGGTGAGGCCCGCGCTGGGGCCCGACGACGGCCGGATCTCCGCGGTGGAGTGGGTCCCGCTCGTCGGGGAGGACGCCGAGGAGGCTGGTGGGGAGGGAGTGGCCGTCGCCGTGGGCACCGACGCCGGGTGGCTTCTGTTCTACTCTCTCGCAGGCGATCTACTGCACAAGCAGAGTATTTATCCTTCAAAGATACTGAAACTTAACTTCCGTGAGAGGAAGGAAAACGCCTGGGAAGATTCGGGTTCAGATGAGCTTTCTGTGGTTTTCCCTGGTGTTATTGCACGTTTTGATGGTGCTGACCTTCAGAACATGCTTCAAAAATCATTACATGAAGTTAAATCGCACCTGTGGAAAGACAAATCTGAACAGGAAGATGCTGAGGAAGATAGTTCCTTTGGAAGAATACCTTTTCAAATTTGGAATGTAAGCAAATTCAGTTCTTGTGCAGATGCTGCAATTGTTGGGCTGATGCCACCTCCCTTGCTGGAACTTCAGTCGAGTCAGCGCCATTATTGTGCAATTACAGTTGGAGAGGATGCTGTAGTTTCTGCATATAGGTTATCAGAAGACAGAAGCAGGTCAATTGTTGGAGCAATTTTATCAAGAGGTGTTGCTGCAACATTTTCAACAATATCATCTCTGTCTAAAATTATATGGCGGAGCGAACCATCACCAACCAAGAAATCACGTCCTAAGCCTCAGTCCTTTGCAAAAACATCACCACTAACTTGCTTGAAAGATTCACCGAGGAAGGGTGAACGGCTTACACTATCTCCAAGTGGTACATTGGCTGCCATAACTGATTCTCTTGGCCGCATTCTACTATTGGATACTCATGCCCTTGTGGCTGTACGGCTGTGGAAGGGTTACCGTGATGCTTCATGTCTTTTTGTTGAGATGCTTCTGAACAAAGATAAAGCATCGAGCTCACTGCACACAGAATATACAAAGAGTGACTATTGCCTGTGCCTAGCGATCCATGCTCCACGGAAAGGCATCATTGAGATCTGGCAAATGCGTACCGGGGCACGTCTTCTGACCATCCCGTGCCCCAAGGGAAGCAGGATCTTACAGCCATCGACGAGGTTCATGTCATCGCCCTTCTCATCGTTGTATTCACCATTGGAGGTTTACCTGTTCAACGGTGACTCTGGGCAGTTGTCTGTATTGAATAGGCACATTGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MARRGHHHHLAEVALLASASEDLAAVGAGEREGWLDDPAVLPSLAPRARALAVASAARSVLAVVPVAGVGGGVTVRPALGPDDGRISAVEWVPLVGEDAEEAGGEGVAVAVGTDAGWLLFYSLAGDLLHKQSIYPSKILKLNFRERKENAWEDSGSDELSVVFPGVIARFDGADLQNMLQKSLHEVKSHLWKDKSEQEDAEEDSSFGRIPFQIWNVSKFSSCADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSIVGAILSRGVAATFSTISSLSKIIWRSEPSPTKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAITDSLGRILLLDTHALVAVRLWKGYRDASCLFVEMLLNKDKASSSLHTEYTKSDYCLCLAIHAPRKGIIEIWQMRTGARLLTIPCPKGSRILQPSTRFMSSPFSSLYSPLEVYLFNGDSGQLSVLNRHIG</aaseq>

Gene Sequence

<dnaseqindica>1..393#1162..1296#2782..2970#3165..3226#3566..3723#3797..3945#5967..6107#6257..6439#ATGGCGCGGCGGGGCCACCACCACCACCTGGCGGAGGTGGCCCTCCTCGCGTCGGCCTCCGAGGACCTCGCCGCCGTGGGCGCCGGCGAGAGGGAGGGGTGGCTCGACGACCCCGCCGTGCTCCCCTCCCTCGCGCCGCGCGCGCGCGCCCTCGCCGTCGCCAGCGCGGCGAGGTCCGTGCTCGCGGTTGTCCCGGTCGCCGGAGTAGGCGGTGGGGTCACGGTGAGGCCCGCGCTGGGGCCCGACGACGGCCGGATCTCCGCGGTGGAGTGGGTCCCGCTCGTCGGGGAGGACGCCGAGGAGGCTGGTGGGGAGGGAGTGGCCGTCGCCGTGGGCACCGACGCCGGGTGGCTTCTGTTCTACTCTCTCGCAGGCGATCTACTGCACAAGCAGGTTGCTATGATGTGTGATCGATCTCTTCTCTGTGGATGTTTTGTTCCTCGGAGAATTTTTTGAATTTTATTAGGGGTTTCATGATTTAGTAGATCTATATCTGGTCATATTTATTAATTTGAAATCGCATTATTTTGGGTACGTGATAAGCACTGGATGATGGGACGAGGATAGAAGAAGCTGCAAAGACTTGGGGGGTGAAATGTTGGGGGAATTTTAGCCATAGTTTGCGACTTGCGAGAGCAGGTTCATAACTAGGTGGTTGTTGTAAACATCAAATATAGGGGGTTTTTGCTATGAATCGTTATGGTTTGTGTATGATTAGTTGCTCAGGCAGTGTTTTTCAACATATAAGAATGCTCTTCCAGGCTTCGTACTTCTCTAACTAACCGCCGTTTAAGTTACTGTGTAATTCATAGCCTAATTATAAGATAATACCATAGGCACTATTTTTCTGGGTGATTGTTAGGTATTTGCTCTTAAATTGTTAGTTGCAACATTTATCTGCATGCTTTTTTCCATCATACAATTGAACAAGCATAGGGGAGTAAGTCATGTAATTGAGCGGGAAATCTACCTGCTTTAACTATGGTTTGTTCTCTGGGCACTGGGTACCACATGTATTTGCGATGCCCAAAAGAAGTAGACATCAAATTTACCCTGCTTAATAGATAATTGTAGTTCATTTACTATGTAGACGGTCATAGTTGATATTTCTTTTAGTTTTTTCTTATTTCTTACTTCTGATTATTGTATTGCTTATTTCAGAGTATTTATCCTTCAAAGATACTGAAACTTAACTTCCGTGAGAGGAAGGAAAACGCCTGGGAAGATTCGGGTTCAGATGAGCTTTCTGTGGTTTTCCCTGGTGTTATTGCACGTTTTGATGGTGCTGACCTTCAGGTTTCAATAAATCTTTTTGTTATTTTGTTGTTAGGGTTTGAAATGTCATATTTTTTATAGATGTGCTAATCTTGTATGTTTTTTTAGAGAAACATTATCAAAACTTTTTTACTTGCACAGTACTTAGCAAGCGCGTTAAGTTGAGTTTTATTCACTACATTTTCATGTGTTTTGATAAAGATATCCAAAACATCCATACTGTTAAGATGTGTCAGAACCTAATGCAACAGTAATCCTGTATTGCGGCATTTTAGTCTGCATGTAATGACCAAAGCATCAATTGTTCTGTATTCGAAGTTAAGTACTTAAAAGGAAAATTTTAGTAATCCCTGTTGAAAAAAAATGGAAATTTGATAATTACCCTAAGTTAGATATTTTCTTGCATGGACACCTTTGAAATTAAAACTAAAAAAGTGAAAAAACTGAATTACCAGTATTGGCCTTTTAATAGAATTTAGTTTTGTTTGTTAACTACGGAAAGTTGCTTACTGTTGTTAAAACGTTTTGATTTACTGTGCATTCAATCATTCACTTTGTAGGGACATACTCCCTCCGTCCCAAAACACAAGGGATTTTGGCCGGATGTGACACATCCCTTATATTTTGGGAAGGAGGGAGTAAAATTTATTTCATTTTCACCATCCAAGTTTAATACTACAGTTGAGATCAGATTTCTCATTCTCCTATGATGTGCTCTGAAATATTATTTGTTTATTACTTTATTTAATGTCTTGCTTTTAGTATGTAGCAGTCGTTAAACATTTACTACTACTACCAATAGTAGGATCTTGGGAGAAATGCAACCATTTACAATGTTCCAGTCAGACAACTACAAAAGATCATGGCAATAACTTCAAATACTATCAAATATCTGTTCATTAATGATGAAGAAAAAATTATACTCCCGCCGTCCTGTTTTATAGGGCGTATAAAATTTCTGCTGCTATCCCAAATTATAGGTTGTACTATCCCTTCAGCTTTTATCCCAAGAATGCCCTACCAGCATTTGCATGCATGCCCATAGTTAATGCTTGGATAAGCACAATTACTTGTTGAGCCAAGCAGGCGGTCAAAGCAGTTTTGCATGTGAGCGCTACCCTGGAGTTGCAATGGGAATTCTGCATAGTAAAGCGTGCTTAATTAGGGTCATATCAGGATGACACACACCCACTCTTGTTCTCTGCGAAAAAACTTATAATCCTTATAAAACGGGGTGGAGGGAGAATTTGGAGTGGGATTCTTTTTCCTACAAATATCACCAATGTTCTAGAGGGACACAAACCTATATTCCAATCATAAAGTGCAATATTTTAGTCACTTGCAGTATTATCTAGGGTCCTATAAGCAATATATGCCAGTTTTCTTTTACAGCCATGATGAACCTTCTTTGATTCCATACACAGAAACATTTCAATGCTCAGTAGACAGTACTTTTGTTATCTGTCTTCCTTTTCTATTCAAATAATAGTTATTGGTTATTTGCAGAACATGCTTCAAAAATCATTACATGAAGTTAAATCGCACCTGTGGAAAGACAAATCTGAACAGGAAGATGCTGAGGAAGATAGTTCCTTTGGAAGAATACCTTTTCAAATTTGGAATGTAAGCAAATTCAGTTCTTGTGCAGATGCTGCAATTGTTGGGCTGATGCCACCTCCCTTGCTGGAACTTCAGGTGATTTGCCCTCGTATCTTTCTCTTACTGCTGTACCCACTTATGTTAGAAATTGTTATCAAAGTTGAAACCTAGCTTGCCTTTATCAGTATTATTTCAGTTTTTATACCCTACTTCATTTAAGAAGTTACCTTCAGTGAAGTTTCTGAAGTTATTATCGTATTGAATTCAGCTGCTTTTATATTGCTGGGCAGTCGAGTCAGCGCCATTATTGTGCAATTACAGTTGGAGAGGATGCTGTAGTTTCTGCATATAGGTGAGTTCCATTACTCAGTGGCTTGAACATTTCCAATCTGGGTAATCATTCTTCTAGAAAATGTATCTGTGCTTCCATCGTGAGCGGAGCAGCATGGTTTAGGGCTTCCAAGGCATATCTGGGCACTGTCTTCCCTGTAAAATTTATATGGACACACATTTTGCCAATTCTAACTGTCCTGCAAATATAAATGACATTTATATGTTTGATTCAGATTTGTATTGATTCAACTGACTAAAATAGTGTTTAACTTATATGTATGCAATTGCTGAAAATGGGAAGATGGAGTTGCAATTTACTCCTGTTTTGGCTTTCCTCGACATTTTGATGGCTTTGCAGGTTATCAGAAGACAGAAGCAGGTCAATTGTTGGAGCAATTTTATCAAGAGGTGTTGCTGCAACATTTTCAACAATATCATCTCTGTCTAAAATTATATGGCGGAGCGAACCATCACCAACCAAGAAATCACGTCCTAAGCCTCAGTCCTTTGCAAAAAGTAATTGCCTAAATAATTATGTTCCTCTTACTTAAAAAAAAGAATTTATTTCTCATGGTTACATTTGCTGCAGCATCACCACTAACTTGCTTGAAAGATTCACCGAGGAAGGGTGAACGGCTTACACTATCTCCAAGTGGTACATTGGCTGCCATAACTGATTCTCTTGGCCGCATTCTACTATTGGATACTCATGCCCTTGTGGCTGTACGGCTGTGGAAGGTAATTACTTGAGTATAACTTCATTTTCTATTTCTGAAATTTTGAAATGGAACACAGGAACTGTGTTCTACATCGATACTGATATAAAATGCAATGATAAGGGCATAAGGCAATTTTCATTTATTTGTTGGTTGTGCTGTGTTGCCATCTTGGTGACACATTTGTTTTGCTCTCTATGTGCTGGTAGCCTGGTACCATGTTCTAGTGTGGTTTTCTGGATTGCACCACCTTTAGTGGTTAATTGTGCGAGTCTTAGTTGATGCACATAAAATGGTATTTTGCTTTGTCTGCTGCTCTCACATCCTAGCTTGTTGAGCTTTATAGTCTTAGGTTAGAGAAATTCTGCGATTTGCCATTGACACTTACAAAAATGACATTGACGAAGATAAGTTCTATAATATGCCATCATGCAAACATTTTGCTTTGAATTCTGCCATTAGACATCCATTTTTTTTTTCATAATGTTCAAAATACCCCCAAGCATGCCTTTGAGGGCCGCTCTATTAGCAATGACAGATGGAGGGCTTGGCGTGTGCTCCATGTCTAGCTCTGGTAGCTCGTCAGTGTCCATGCCCAAAACCCTCAGTAGAGTGGCTCTCTGGCAAACAATGGCACGTCTTGGGGTATTTTGGGCATTATAAATAAATAGAGAGATGCAGAATTGGGAGAAAATGTTTGTATGATGGCAGATAGTGGAACTCAACCTTGTTGATGGAATTTTATGGAATGAAGCCTTTGTCCATTGCAAATCGTAGAATTTCCCTCTTAGGCTTAAAGCATTACTTTTGTGGGAGTAGGAGGGTACTGTTTTGTGGCTATACCTTAACTTTTGCACCACTAACCATTATCTTAGCGTGGTGTTATCGCAATTACTGCAGCTAGTCAGTTTGTGGCAGCATTTGTTCATTTACTACTTGCTGCTGCTGTTACCTATTTTTATACAGTTATGTTATAGTGGTGGGTGACACTTTTGTTTTGCGTAACAGCAATTAACCAATCTGTGACAGCAATGTTCATTTAGGTATTAGGTTGGCTAGTTTTCATATGAATCATTTGTTTTGGTTAGATACTCTGTCATGACACAAATAGATGCTGTTTCTTGTTCATAGCGCCTTGTTCAGCATAAAACTTCCATCATCTACATGTACTGAAAAAATGTTGTAAAATTTGATGGGGTTGAATGTTATGAAAGCTCCTTTATGCAAATTTACAAATAATTTCATATGGGCGATCTAAACATTCATATTGATGCGTATTCCTTGTGGGAAGTAGTAGCTTATATATTTCTCTTTAAATTACCTTTGAGACTAACATATCTAAACATGCATACTTCTATTTATCAAATATTATTTGATCAAGAAGAATGGATTAAAAGACATTAACTGTATTTAGTCTGTAGTATCTTTCTTAAAAAGGTCTCGTTCTCTGCCTTATTTATCCCACTATGAATATGATAACTTTATTTATATGGAAGTTCTAGCTCGAAGCATGTAATAGAAAAGATCCTAATTAGTACAACTGAAACAAAAAAATTGTAACCTAATTTAAAATAGAATTCAGATAAGGTGGTTATCAAGTGCAGCTCATCCAGATTTTTTTTTTGTATTTGTTATCTTGTTTTCAGAATAGCCATATCTCCAATATGGCAATATCTTCTTCTGTAACTATAAGTTTATTACTCCAAATCTAGAAAAATAATAATGAATCCAGCTGTGGGAACTTTGAACAGTGGGAATCAATTGCTCAGCAATGCATTGGAATAACTGCTGTTTGGTCGGTGCCCTGAGCTCGATACCTGAGAAATTTCTATTTATCATAAGTTCATGAATCTTGCCCGGTCAGGCAGCCTGAGTCTATGCTTGTTTGTTCTGCCATGGCTACCTGGGAGAAATAGCAAGCAGACCCTCAAGTCCTTCACAGTGCTGAACAATTATAATTAACCACCTTTGTAAGATTTAAGTCATCCTGTACTGTCTGGATCATTATTTTTATCGCATAACATTATTGTTTCATGTTTCCAGGGTTACCGTGATGCTTCATGTCTTTTTGTTGAGATGCTTCTGAACAAAGATAAAGCATCGAGCTCACTGCACACAGAATATACAAAGAGTGACTATTGCCTGTGCCTAGCGATCCATGCTCCACGGAAAGGCATCATTGAGGTAGTTTTACGCTTGCCCCATATGATATTCCTGCAACATGGCTCTCCTCAAGAAGAAAAAAACATCTGTTCATCTGTAAATGGCATTATGGATGTCGATGTGATTATCGACAGAAACTTATAATGTGAGGTTTTGTTCTGTGTTTACAGATCTGGCAAATGCGTACCGGGGCACGTCTTCTGACCATCCCGTGCCCCAAGGGAAGCAGGATCTTACAGCCATCGACGAGGTTCATGTCATCGCCCTTCTCATCGTTGTATTCACCATTGGAGGTTTACCTGTTCAACGGTGACTCTGGGCAGTTGTCTGTATTGAATAGGCACATTGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030011