BGIOSGA030012

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030012| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030012, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030012, complete gene.

LocusTag

OSJNBA0057D11.22

Ensembl Transcript ID

BGIOSGA030012-TA

Ensembl Protein ID

BGIOSGA030012-PA

Length

4780

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7565923..7570702

Sequence Coding Region

7570517..7570702,7569324..7569715),complement(7569154..7569238,7568809..7569031),complement(7568563..7568666
,7568391..7568478),complement(7568127..7568281,7567040..7568038),complement(7566342..7566728
,7565923..7566219

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7565923..7570702 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7565923..7570702 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGCGGGCGGCGGCGGCGTGGGGAAGGTGGAGCGGCTGTCGTCGATCGACGCGCAGCTGCGGCAGCTGGTGCCGGCGAAGCTGTCGGAGGACGACAAGCTCATCGAGTACGACGCGCTCCTCCTCGACCGATTCCTCGACGTCCTCCATGGCCTCCACGGCGACGACCTCAAGGATCTCGTTCAAGAATGCTATGAGGTGGCCGCGGAGTACGAAACGAAGCACGACGTGCAAAAGCTCGATGAACTCGGGAATATGATAACAAGCTTGGATCCGGGTGACTCGATTGTGATTGCGAAAGCCTTTTCGCACATGCTTAACTTGGCCAACTTGGCTGAAGAAGTCCAGATCGCATACAGGAGGAGGATCAAGCTCAAGAAGGGTGATTTCGCTGACGAAAACTCGGCAATGACTGAATCCGATATCGAGGAAACACTCAAGAGGCTTGTTTTTGACCTGAAGAAATCCCCTGCTGAGGTATTTGATGCCCTCAAGAGTCAGACTGTGGACCTAGTTTTGACTGCTCATCCAACACAGTCTGTGAGGAGGTCACTGCTCCAGAAACACTCCAGGATTCGGAACTGTCTGGTTCAGCTTTATTCAAAGGATATCACTCCAGATGACAAGCAAGAGCTTGATGAGGCTCTCCAGAGAGAGATCCAAGCTGCCTTTAGAACCGATGAGATCCGAAGAACACAGCCCACTCCCCAAGATGAAATGCGTGCTGGCATGAGCTACTTCCATGAAACAATATGGAAGGGTGTTCCAAAGTTCTTGCGCCGTGTCGATACTGCATTGAAGAACATTGGTATCGACGAGCGTGTTCCTTACAATGCTCCTCTTATTCAGTTCTCGTCTTGGATGGGAGGAGATCGTGATGGAAATCCGAGAGTCACACCAGAGGTTACAAGGGATGTCTGCTTGCTTGCAAGAATGATGGCAGCAAACTTGTATTGCTCACAAATTGAGGATCTCATGTTTGAGTTATCTATGTGGCGATGTAATGAGGAGCTACGCTCACGAGCTGATGATCTGCACCGCTCTTCTAAGAAGGACGCAAAGCATTACATAGAGTTTTGGAAGAAGGTTCCTCCAAATGAACCATACCGGGTGATACTGAGTGATGTGAGAGATAAGCTTTACAATACACGTGAACGATCAAGAGAGTTGTTGTCCAGTGGATATTGCGACATCCCTGAGGAAACAACTCTGACAAATGTTGAGCAGCTATTGGAGCCCTTGGAGCTATGCTATAGGTCGCTGTGCGCTTGTGGTGACCGTGCCATCGCTGATGGAAGCCTTCTTGATTTCTTGCGCCAAGTTTCCACCTTTGGACTCTCCCTCGTGAGGCTTGACATTAGGCAAGAATCCGACAGGCACACCGATGTCCTTGATGCCATCACGACATACCTGGGCATAGGATCTTACCGTGAGTGGTCCGAGGAACGCCGTCAAGAGTGGCTGTTGTCCGAACTCAACGGGAAGCGACCATTGTTTGGCCCAGACCTTCCCAGGACAGATGAGGTTGCTGATGTTCTAGACACATTCCATGTGATTGCCGAGCTCCCTGCTGACAGTTTTGGAGCCTATGTTATTTCCATGGCAACAGCCCCCTCGGATGTCCTTGCTGTTGAGCTCCTCCAACGCGAGTGCCATGTCAAGACACCGCTTAGAGTTGTCCCCCTGTTCGAGAAGTTGGCTGATCTTGAGTCTGCCCCTGCGGCATTGACCAGGCTCTTCTCGATAAGTTGGTACAGGCAGAGGATCAATGGTAAGCAGGAGGTCATGATTGGGTATTCAGATTCAGGCAAGGATGCTGGCCGTCTCTCGGCAGCTTGGCAGATGTACAAGGCTCAGGAGCAGCTCGTCAAGGTAGCGAAGGATTTCGGGGTGAAGTTGACGATGTTCCATGGACGAGGTGGAACCGTTGGTAGGGGCGGTGGGCCGACTCACCTTGCCATCTTGTCTCAGCCTCCAGACACGATCAACGGATCGCTCCGTGTCACTGTTCAGGGTGAAGTCATTGAGCAGAGCTTTGGTGAAGAGCACTTGTGTTTCAGGACACTGCAGCGTTTCACCGCTGCTACACTTGAGCACGGCATGCATCCACCCAGTGCACCGAAGCCAGAATGGCGAGCTCTTCTTGATGAGATGGCTGTGGTGGCAACCAAGGAGTATCGATCCGTAGTGTTCCAAGAGCCACGCTTTGTGGAGTATTTCCGCCTTGCAACACCTGAGACAGAGTATGGAAGGATGAACATAGGAAGCAGGCCATCCAAGAGGAAGCCAAGTGGAGGCATTGAATCACTCCGTGCGATCCCATGGATCTTCGCATGGACGCAGACCCGCTTCCACCTTCCCGTCTGGCTTGGATTCGGTGCTGCATTCAAGCACGCCCTTCAGAAGGACATCAGGAATCTCCACATGCTCCAGGAGATGTACAACGAGTGGCCGTTCTTCAGGGTCACTCTCGACCTGATTGAGATGGTTTTCGCCAAGGGTAATCCTGGCATTGCTGCCCTTTACGACAAACTCCTCGTTTCTGAGGATCTACAGCCACTGGGTGAGAAGCTGAGAGCCAACTATGTAGAGACACAAAAGCTGCTTCTTCAGGTTGCTGGCCATAGGGATCTTCTTGAAGGTGACCCCTACCTGAAGCAGCGGCTCCGACTCCGCGACGCCTACATAACCACCCTGAATGTCTGCCAAGCCTACACGCTGAAACGGATCCGTGACCCGGATTACCACGTCACGCTGCGCCCTCACCTGTCCAAGGAGGTGATGGATGGGAGCAAGCCGGCCGCGGAGCTTGTGAAGCTGAACCCGGGTAGCGAGTACGCGCCAGGGCTGGAGGACACCCTCATCCTGACCATGAAGGGCATTGCTGCAGGGTTGCAGAACACTGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MSAAGGGGVGKVERLSSIDAQLRQLVPAKLSEDDKLIEYDALLLDRFLDVLHGLHGDDLKDLVQECYEVAAEYETKHDVQKLDELGNMITSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKKGDFADENSAMTESDIEETLKRLVFDLKKSPAEVFDALKSQTVDLVLTAHPTQSVRRSLLQKHSRIRNCLVQLYSKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGIDERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYCSQIEDLMFELSMWRCNEELRSRADDLHRSSKKDAKHYIEFWKKVPPNEPYRVILSDVRDKLYNTRERSRELLSSGYCDIPEETTLTNVEQLLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITTYLGIGSYREWSEERRQEWLLSELNGKRPLFGPDLPRTDEVADVLDTFHVIAELPADSFGAYVISMATAPSDVLAVELLQRECHVKTPLRVVPLFEKLADLESAPAALTRLFSISWYRQRINGKQEVMIGYSDSGKDAGRLSAAWQMYKAQEQLVKVAKDFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTINGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPSAPKPEWRALLDEMAVVATKEYRSVVFQEPRFVEYFRLATPETEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHALQKDIRNLHMLQEMYNEWPFFRVTLDLIEMVFAKGNPGIAALYDKLLVSEDLQPLGEKLRANYVETQKLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLKRIRDPDYHVTLRPHLSKEVMDGSKPAAELVKLNPGSEYAPGLEDTLILTMKGIAAGLQNTG</aaseq>

Gene Sequence

<dnaseqindica>1..186#988..1379#1465..1549#1672..1894#2037..2140#2225..2312#2422..2576#2665..3663#3975..4361#4484..4780#ATGTCGGCGGCGGGCGGCGGCGGCGTGGGGAAGGTGGAGCGGCTGTCGTCGATCGACGCGCAGCTGCGGCAGCTGGTGCCGGCGAAGCTGTCGGAGGACGACAAGCTCATCGAGTACGACGCGCTCCTCCTCGACCGATTCCTCGACGTCCTCCATGGCCTCCACGGCGACGACCTCAAGGATCTCGTAATTTATCCAACCCATTTTCTTCCTTTTCTTTTTTCTTTTGATTGCAATCTTGGATTGGAGCAATACTATGTATGAGTATGTGAATCCAGCTGAGGAGCTTTTCGTTTCAGGGCAACACGTGGCATTGTTTTGATTGGGATTTTTAGTTCAGTAGGTTTTACTTTTAAGTGTGCAGATTGGGTTTGGATTTATTACTACTCTTTACTGGGGGGTAAATTTGTGTATGGTTAATTCTGTGGTTTATTAATTATTAGTATGGGTTTTAGTGTAAAGCTTGAATCTTGGAGGTGAATTAGTGCTCTCTGATTATTTGTTCAGTTGTTTGTGTGCTGATTTAGTGTTCTGGGTACTGAGACTGAGCATACCAGACTACCAGTGGATTCTGTTCTTGATTAGGCCTAGCTGATCTGTTCATCTGTTTGGGGATCTCTTGTTGAATCAATTAAAATACTTTTTTTACTGTTTTTTTTTTACTGACAAGGATAAGTAATGAAGCCTGCAGAGTTTGACCGTATCAATTAATTTAGTACAAAACTTTTGGTTCTCAGTAAAAACACACTGTTCAAGTATTCATGCATGGGATTATGGGTGTGTTGTTTCTCAAGAAACAGAGTTGATTGCAGAGTCTGTTCTTCCTTTATATACCTTCCTGTAAACTGAACCTGAATCCATACAAATAATTTCAGCAAATGTACAAATAATTTTGATTCTTTCCGTGCTCATCTTTTCATAGTTATTATTACGATTTGATTAAAAGGGAGTGCCACCTTTAAACTGAATTTGCGTGCTACCTGATAGGTTCAAGAATGCTATGAGGTGGCCGCGGAGTACGAAACGAAGCACGACGTGCAAAAGCTCGATGAACTCGGGAATATGATAACAAGCTTGGATCCGGGTGACTCGATTGTGATTGCGAAAGCCTTTTCGCACATGCTTAACTTGGCCAACTTGGCTGAAGAAGTCCAGATCGCATACAGGAGGAGGATCAAGCTCAAGAAGGGTGATTTCGCTGACGAAAACTCGGCAATGACTGAATCCGATATCGAGGAAACACTCAAGAGGCTTGTTTTTGACCTGAAGAAATCCCCTGCTGAGGTATTTGATGCCCTCAAGAGTCAGACTGTGGACCTAGTTTTGACTGCTCATCCAACACAGTCTGTGAGGAGGTCACTGCTCCAGAAACACTCCAGGTTAGTTGGCGAAACAGCACGATTTGCTCACACCACATGATGTAGTTTCTAGTCTCTAATCTCGATTGTAAAATTCTTATTTCAGGATTCGGAACTGTCTGGTTCAGCTTTATTCAAAGGATATCACTCCAGATGACAAGCAAGAGCTTGATGAGGCTCTCCAGAGAGAGGTGCTTATTGCAAACATTATGTTCATTTACAGCATGCCTGGCGCCTTTACATTATTGTCAGCATGAGGTCAGAAAGATCCGTAATCCATTCTTATGCTTCACCTGACATCCTATTATTTCAGATCCAAGCTGCCTTTAGAACCGATGAGATCCGAAGAACACAGCCCACTCCCCAAGATGAAATGCGTGCTGGCATGAGCTACTTCCATGAAACAATATGGAAGGGTGTTCCAAAGTTCTTGCGCCGTGTCGATACTGCATTGAAGAACATTGGTATCGACGAGCGTGTTCCTTACAATGCTCCTCTTATTCAGTTCTCGTCTTGGATGGGAGGAGATCGTGATGGTGAGAAACATATCTATTTTGTTGTTGGTTCTTAGCTCTATGCCTTATAAATAATTACAGCACAATGAATCCTCTCTTACATAACTACCATATAGGACATACCATGTCTGTATGCACTCTAAATTTCAAATAACCTTTACAGGAAATCCGAGAGTCACACCAGAGGTTACAAGGGATGTCTGCTTGCTTGCAAGAATGATGGCAGCAAACTTGTATTGCTCACAAATTGAGGATCTCATGTTTGAGGTACGATTTGATTTGACTATTTTAAAGTATAGTAATTATTATGCATATGATTGTTGGATATTGATAAAATTTAAATGATTTCAGTTATCTATGTGGCGATGTAATGAGGAGCTACGCTCACGAGCTGATGATCTGCACCGCTCTTCTAAGAAGGACGCAAAGCATTACATAGGTACAGTTACAGCATTTTAGGCTTAACTAATGATGTTGGTTCCTACAAGAGGCCATTTTTTGAAAAATAAGATTCTAATTGTTGTTTTTTTGTTGAATCTTGGATGCAGAGTTTTGGAAGAAGGTTCCTCCAAATGAACCATACCGGGTGATACTGAGTGATGTGAGAGATAAGCTTTACAATACACGTGAACGATCAAGAGAGTTGTTGTCCAGTGGATATTGCGACATCCCTGAGGAAACAACTCTGACAAATGTTGAGCAGGTATAGAAATTCCCAGCAAAAAATTAATAATTTATATGTATAACTTATGTTCAATGATTTTTTAACACATATTTATCTTCTGTTTCAGCTATTGGAGCCCTTGGAGCTATGCTATAGGTCGCTGTGCGCTTGTGGTGACCGTGCCATCGCTGATGGAAGCCTTCTTGATTTCTTGCGCCAAGTTTCCACCTTTGGACTCTCCCTCGTGAGGCTTGACATTAGGCAAGAATCCGACAGGCACACCGATGTCCTTGATGCCATCACGACATACCTGGGCATAGGATCTTACCGTGAGTGGTCCGAGGAACGCCGTCAAGAGTGGCTGTTGTCCGAACTCAACGGGAAGCGACCATTGTTTGGCCCAGACCTTCCCAGGACAGATGAGGTTGCTGATGTTCTAGACACATTCCATGTGATTGCCGAGCTCCCTGCTGACAGTTTTGGAGCCTATGTTATTTCCATGGCAACAGCCCCCTCGGATGTCCTTGCTGTTGAGCTCCTCCAACGCGAGTGCCATGTCAAGACACCGCTTAGAGTTGTCCCCCTGTTCGAGAAGTTGGCTGATCTTGAGTCTGCCCCTGCGGCATTGACCAGGCTCTTCTCGATAAGTTGGTACAGGCAGAGGATCAATGGTAAGCAGGAGGTCATGATTGGGTATTCAGATTCAGGCAAGGATGCTGGCCGTCTCTCGGCAGCTTGGCAGATGTACAAGGCTCAGGAGCAGCTCGTCAAGGTAGCGAAGGATTTCGGGGTGAAGTTGACGATGTTCCATGGACGAGGTGGAACCGTTGGTAGGGGCGGTGGGCCGACTCACCTTGCCATCTTGTCTCAGCCTCCAGACACGATCAACGGATCGCTCCGTGTCACTGTTCAGGGTGAAGTCATTGAGCAGAGCTTTGGTGAAGAGCACTTGTGTTTCAGGACACTGCAGCGTTTCACCGCTGCTACACTTGAGCACGGCATGCATCCACCCAGTGCACCGAAGCCAGAATGGCGAGCTCTTCTTGATGAGATGGCTGTGGTGGCAACCAAGGAGTATCGATCCGTAGTGTTCCAAGAGCCACGCTTTGTGGAGTATTTCCGCCTTGTAAGTCCTTTCTCCCATTTATCATCTTCAATTCTTCATCAGACTAGTAAAACCTCTAAAATAGATTGAAAAGTGAAAACTTAAACTTAAAAGTAATTATTTGCTTTGTGCAATGATTTACCATGGCAATCTTATACTTTGATGAAATAATTGTAAGATAGTGAACTAATGCAACTTAGGAGTAGCATACCGTGCCACTGTTATTTTTGTGATGGAACAGTGTAAACTAGACTAAAGATAACCTTGGAGCCATTGAATTAGACTTATTAGACTTTTTCAAAATTATAATTTGTGTTGTTTGTGGTTGGCAGGCAACACCTGAGACAGAGTATGGAAGGATGAACATAGGAAGCAGGCCATCCAAGAGGAAGCCAAGTGGAGGCATTGAATCACTCCGTGCGATCCCATGGATCTTCGCATGGACGCAGACCCGCTTCCACCTTCCCGTCTGGCTTGGATTCGGTGCTGCATTCAAGCACGCCCTTCAGAAGGACATCAGGAATCTCCACATGCTCCAGGAGATGTACAACGAGTGGCCGTTCTTCAGGGTCACTCTCGACCTGATTGAGATGGTTTTCGCCAAGGGTAATCCTGGCATTGCTGCCCTTTACGACAAACTCCTCGTTTCTGAGGATCTACAGCCACTGGGTGAGAAGCTGAGAGCCAACTATGTAGAGACACAAAAGCTGCTTCTTCAGGTATGTTCACTAAAAACTTCAACCAGTACAATTCCAACTTCTACAGTACTCTGAACTCCTGATTACTCCTTGTTATCATACAAAAGATAGTACAATGATTGGCTATTTTTTTTTTACTTCAGGTTGCTGGCCATAGGGATCTTCTTGAAGGTGACCCCTACCTGAAGCAGCGGCTCCGACTCCGCGACGCCTACATAACCACCCTGAATGTCTGCCAAGCCTACACGCTGAAACGGATCCGTGACCCGGATTACCACGTCACGCTGCGCCCTCACCTGTCCAAGGAGGTGATGGATGGGAGCAAGCCGGCCGCGGAGCTTGTGAAGCTGAACCCGGGTAGCGAGTACGCGCCAGGGCTGGAGGACACCCTCATCCTGACCATGAAGGGCATTGCTGCAGGGTTGCAGAACACTGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030012

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030012&oldid=29216"