BGIOSGA030016

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030016| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030016, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030016

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030016, complete gene.

LocusTag

OSJNBA0054E15.11

Ensembl Transcript ID

BGIOSGA030016-TA

Ensembl Protein ID

BGIOSGA030016-PA

Length

5329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7461976..7467304

Sequence Coding Region

7466981..7467304,7461976..7464927

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7461976..7467304 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7461976..7467304 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTACGACGAGCGCCGCTGCCGGTGGGACCGAGGGCCGCCGCCGACGGCAATCCGGCGCCGCCGGGTGAGTCGAGCAAAGGCCCCGGCCTTGACGGCGAGTTCCGGCGGCTGGTGGACATCGCCGACGAGGGGGTCAAGCTGGTCAACGACGCCGAGCTGAGGCTGAAGAAGCGGGCGTGCGACAACCCCAAGGACCTCGCCGCGTGGCTCCGGCGGCTCCAGAGCGCCAAGGAGGACCTGGACGACGCGCTCGATGAATTCAGAGCGTCCATGGCGGCGCAGCGGCGGCGGCCGGAACAGGAGGACAGGAAGAAATCGATTCGCCATTGGTTCTCACGCTCATCAGCTAACCATGAGGTTGACAAGAAAATGAAAATCACTACTGAAAAGCTGAATAAGAAATTCCATGGGATCTTACAGAATGGTCGTGAACTTGGCCTTCAACCAATCAAATTGCAAAGACAGAGTCGAATATCTGAATTTCCTGGGGATCTCTCACCCCAGTACACTCTTGTAGGAGATATTGAACAAGAAAAGTTGAAGTTGATCAACAAATTGACTGGCAGCGAAAGCACCAGTGCTGTCATTGCAATCTTTGGGTTGGGTGGAATTGGCAAGACTATGTTGGCACGAAAAGTACATGATGATCTCCTCACAGAAAGTGCATTCAGCACTGTTGTATGGGTAAATGGCTCCAAATCTTTCACTAAAAAGAAATTGTTACGTGCAATTCTAAGTTCTTCTGGTGGCAAGCCTGGAGAGGCAAAAAAAAAGAGCAATGAGCAAATTGAGGACATGTTGGTTACAATACTTGGAGCAAAGAAATTCTTACTGGTACTTGATGATGTATGGGCTGACCAGATTCATCAGGATTTTCTAAAAGTTAGCTTGCAAGCACAGCAAGGAAGCCGAATTCTGTTGACTACCCAGGATGAGGGAGTTCTGAGGCAAATTGCTTCTGATGACATCCACAAAGTAAACAAATTGAGTTTCCCCGATTGTTGGTCTCTGCTCTGCAGTAGTGCTTGCCTGGATGAACAGGATTGCGACGCATTAACAGATATTGGTATAACAATTATCCAGAAATGTAACAAGGTTCCATTGGCTATCAAAGTTTTGGGTGGTCTCCTAGGAACAAAGAACCCAAGAAGAGAGGAGTGGCAGGAAGTGATCAGTGAGAGTGAAGGGTGGACTCTTGAGAACGTTCCTGATGGCATGGAGGAAATATGTCTCCCCATCTACTTAGCCTATTACAGTCTGCCATATCATTTGAAATTATGTTTTGATTACTGCTTGCAGCTCCCTGAAGGATTTGTTATTAGGCCACAAATTGTTACTCAGCTATGGATAGCAGAGGGCTTTATTCAAGAACAAGATAACCGCAACCCTGAAGATATCGCAGAACAGTATTACAAGGAATTGGTTCTAAGAAATCTTCTGCAGCCTGAGATTGGGTGCTTTGACATGTCGAAATGCACAGTGCATGATTGTGTAAAGTCCTTGCTGCAACCTTCAACTAAAGACAAGAAATCAACAGATAGCACCGAAGGGACAAAGTTTTTTAGAAGCTTCAGGACAGCTTTTGTCTACAAGAATCCATCAGGAGATCGCGGCCTCAATTGGCTCATAAATTTGAGATCTCTCATAAATTTGAGATCTCTTGACCTTACTGGTACTTGCATTAGGTACATACCGAAGTCACTAGAACATCTACATCACCTTAGGCTCTTAAACCTCTCACTGACACAAGTTTTAGAGCTTCCGGAATCTATTGAGAGCCTCAGCAACCTGCAGTTCTTGATACTTCGGTGTTGCTATTGGCTCGAAACCCTGCCAGAGGAAATTAGTAATCTGGTCAGCTTGCGGAGCCTTGATTTGGAAGGGACTACACCACATATAGTTCTGTCAAGATTATCAGCCCTGGAGCAGCTAACTGCACTGCATGGTTTCATAGTAGACCACAATGCGGCAGTACCCGACAATGATCATCAGAACGGATGGCCTATGAAAGAGCTGAGTCCTTTGAAGTCATTGCGGAGCCTGCAGATAATGGGCATCGATAGAGTTCCAGATGAATCTAGGGCGCAAGAAGCTAACCTAGCAAGCAAGTCTCACCTCACACATCTTGAGTTATGTGGTAGTAGCACCAGTGATTCACAAGTCTTTGTACCAGAGGAAGAACAAGATAGATGGCTCAGTGTGCTTTGCGGTCTCCAACCTCCACAATGCTTGGAATATCTCAAAATAGCGAGCTATTATGGATCATCTCTTCCGGATTGGATATTGCAACTTCGAAACCTCCAGCGGCTTGTGCTTACCGATTGCAAACTATGTGATAGCCTCCCAGCATTGGGGCAGCTACAACAACTGAAGTTCCTCACAATCAATGGATGTCCCAAGTTACGCATCATCGAGTGGCGGACTGGTGCTACGACTAAACTGGTATTTCCAAAGCTAGAGCAGCTGGACCTCAGTGACATGCAGGCCTTGGAATCATTGGATAGGTTTAAACATGGTGACCTGCTTTCCCTGACCAAATTTCACCTAGAGAACAGTCCCAAATTGAGATCCCTCCCATCTGGCCTTGGTTACTGCAAGGTACTGACAAGTATGAAGATTGTTGGTGCTGATAGCCTCCAAGTGATTGATAACCTTCCTATGCTCAAGGAATTGGTTGTCCAAGACTGCAGAGAACTCGTCAAGATCTCAAATCTTCCAGTGCTTCAGGTCCTGGTAGTCGTTGATTGCTCCATGCTGCAAGATTTGAGGGGAGTTGGGGGCCTAAGGCATGTCCGCCTCGTGGACAGAGTGACGAAAGAACTTCCAGATTGGTTGACAGGCCATGAGGCTCCTCTGCTGCAAATATTCACCATAGTCGGCACGACAGAACTACTCAGGAAGTTAGTTCCCAACACCAAAGGTTGGTCGGCTATACGTAACATGGACAGAGTTTATGCAAATTTGCCTGATGGGGCCCCGTTCTTGGCCTACAACAAGGGCAAACCGGATTTTCAAATGATTAAGACAATTGTTAGCCCTCAATTGGAAGATCCTTCTGCAGACGTTATACTCGGCAAGCTTGTCAGAATGGCCTCACAAACTGGCCTGGCAGATACTGTAAAACGCTATTTCCTCCCTCCACTCGCCATTGCTCTTGTGTTTTTGCTGCTGGTGACCAGAGATTTTACGCTCATCGGAGTCTTCCTTGCCTTCTTTGCGGCATGTGTTGCTGGGTTTTCTGTGATATACATTCAGAAAACTTCAAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAVRRAPLPVGPRAAADGNPAPPGESSKGPGLDGEFRRLVDIADEGVKLVNDAELRLKKRACDNPKDLAAWLRRLQSAKEDLDDALDEFRASMAAQRRRPEQEDRKKSIRHWFSRSSANHEVDKKMKITTEKLNKKFHGILQNGRELGLQPIKLQRQSRISEFPGDLSPQYTLVGDIEQEKLKLINKLTGSESTSAVIAIFGLGGIGKTMLARKVHDDLLTESAFSTVVWVNGSKSFTKKKLLRAILSSSGGKPGEAKKKSNEQIEDMLVTILGAKKFLLVLDDVWADQIHQDFLKVSLQAQQGSRILLTTQDEGVLRQIASDDIHKVNKLSFPDCWSLLCSSACLDEQDCDALTDIGITIIQKCNKVPLAIKVLGGLLGTKNPRREEWQEVISESEGWTLENVPDGMEEICLPIYLAYYSLPYHLKLCFDYCLQLPEGFVIRPQIVTQLWIAEGFIQEQDNRNPEDIAEQYYKELVLRNLLQPEIGCFDMSKCTVHDCVKSLLQPSTKDKKSTDSTEGTKFFRSFRTAFVYKNPSGDRGLNWLINLRSLINLRSLDLTGTCIRYIPKSLEHLHHLRLLNLSLTQVLELPESIESLSNLQFLILRCCYWLETLPEEISNLVSLRSLDLEGTTPHIVLSRLSALEQLTALHGFIVDHNAAVPDNDHQNGWPMKELSPLKSLRSLQIMGIDRVPDESRAQEANLASKSHLTHLELCGSSTSDSQVFVPEEEQDRWLSVLCGLQPPQCLEYLKIASYYGSSLPDWILQLRNLQRLVLTDCKLCDSLPALGQLQQLKFLTINGCPKLRIIEWRTGATTKLVFPKLEQLDLSDMQALESLDRFKHGDLLSLTKFHLENSPKLRSLPSGLGYCKVLTSMKIVGADSLQVIDNLPMLKELVVQDCRELVKISNLPVLQVLVVVDCSMLQDLRGVGGLRHVRLVDRVTKELPDWLTGHEAPLLQIFTIVGTTELLRKLVPNTKGWSAIRNMDRVYANLPDGAPFLAYNKGKPDFQMIKTIVSPQLEDPSADVILGKLVRMASQTGLADTVKRYFLPPLAIALVFLLLVTRDFTLIGVFLAFFAACVAGFSVIYIQKTSS</aaseq>

Gene Sequence

<dnaseqindica>1..324#2378..5329#ATGGCCGTACGACGAGCGCCGCTGCCGGTGGGACCGAGGGCCGCCGCCGACGGCAATCCGGCGCCGCCGGGTGAGTCGAGCAAAGGCCCCGGCCTTGACGGCGAGTTCCGGCGGCTGGTGGACATCGCCGACGAGGGGGTCAAGCTGGTCAACGACGCCGAGCTGAGGCTGAAGAAGCGGGCGTGCGACAACCCCAAGGACCTCGCCGCGTGGCTCCGGCGGCTCCAGAGCGCCAAGGAGGACCTGGACGACGCGCTCGATGAATTCAGAGCGTCCATGGCGGCGCAGCGGCGGCGGCCGGAACAGGAGGACAGGAAGAAATCGGTAAGGCCGACGCTCTCGCTGGGCTTCTATTTTTATTTCCTTTTTTCTTCCCCCGTTTTTATATAATTTCGCAATTCACAAACAACAACCAAGATGGAGAAATTTGAACTCTATAAATCAAATTACTCAATTTGTGGACCTATGGAGTTCTTTAGTGCCATATGTTGGCATCACACTATTAGTCGCGCTCTAATGTCTTGGCTAATTTTGGGAATCTTGCCACATCTAGTTCAGTTTATGCTCGGACATATATTATAATCAAATTTCAGGAGGAAAATATGTGCTGCTTATGTGTCTGTCCCCCAAATTGAGTTGCTAATCAGGATTTCGCGGATCTGAATCCTCTGCATTCGACCGCACCGCGCCTTTGTTACTGACATATGGGCCTGGATATCATTGGGCCCACATGTCAGTGACAAAGGCATGATACAGTGACTGCATAGGATCTCAATCCGGGTTGGGTTTCGCCAGCCTTGCAACTTCAGAAACAACGTTCATAAGTTTGTTACCTTACTACCTGTTATGAGCAGCAGTACTGATCACAATTTAGTATTTGGAAGCAAGGATGATTATAGTTTCTATATTAGATATTCTTTTTATTTTGTTGACATTTTTAGTTTTCCATTTGATTAGTTAGGTAATTAGGTTCTATCTTTGAGCGCTAGTACCTCTGCCATTGTTATCATTACCAGCTCAGTGCTTGGATGGTACAATGGATCTCAGGAATATATATTTTGCTATGGGATTCATATAAATATTACATATTCAAACCTAATAATCTTTAAATATAAAAACATTTAGGGCATCCCTGGTGTATACGACCTATAATGGTCTTAAGGTGGGATCCACTTTGGCTTATAGAAGCAGCTCAATGTATGAATTGGAGGGGACCACAAGCTGGGGATCAATATAACATAAAAGCTACATAAAAAATGCTCAATATTTGTCGGTTTTGACCCCGCAAGAAACAAGGCAATCAGTTTATTTATGTAATGTAACAAAAAGACCCCTATGATCCTCTCATTTTTTAGGTGCAAATTGCTAGTAGTTTTATAATATTTTAGTGCGTTCAAGAGCCAGCACAATCGGCAGAAAAAAATGAATTTTCTCTCTGACTTTGTGCACAGCCTGGGCCCATGGTACAGAAGCACAAATTGGAAAACTATTTATTGGGAAATGAAAACCAACAAGTATTTGTGAACAAGAGAATTAGTCAAAACGACAAGCATCTATAAACCGATTTTTAGTATCAGCTACCCCTATCCCCCCTACAAATTTCAAAGTCAGGCTGGGCTGGGCCAGTCTTTGGAAAACCAGTCAAACTACCCATCCTAGACCCCCAAACCCTCATTTTGCCTCTTCTTTCTGTGATCAACAATTTATTGTACTAATTTTATAAATGTAAAACGTATAAGTACTCATATTTAACCACTTTCTGGGCTTGTTTGGGCTTCAAGCAAGGTTTTTAGGTCAAAAACTCAAGCCCAGGCCTAGCCCATTACTTCTTGTGGTGAAACCTCTAAGCACAATATCTTATCTCATATGCTGCTATCCAAATAAGTTTTACCTTTGGAAGTTGTGTATCTTTAGCCTAAGATATTTTCCTTTGGTAACCAACACAATTTCACACTCTCTTTGCAGTGCTACTATCAATTTTCATAACAGAACTTCTTAGAAACTCCGCCCCGGTACTAGCTTCCCCTATATGAGGGGCCCTCTTTTACTACAGAAGAGAAAGGGGCTCCAAGTACAAACCCAAAACCTACTTTATGTCTCTTACCACAATGCAGATAGTGCCTGAACTCAGGTTATTCAGCAATCTATTAACTCACAATAATTGAGAGAAGCTAAACTGCACTAAAGCACTTAAAGAAAATCAAAACCAACTTCCTCTTCCATTCCAACTTAATAACTTTGGAGAGTAGAAAATCTTTGCTAGTTGAAATCACGCATGGTGTATCCACATGCATTTTCCATATACTTTGTCTCTTAAACGCTATTCTTATTTGCCTTCAATGACCATTCACAAGAAAGGAATTATTTATCTGAACAGATTCGCCATTGGTTCTCACGCTCATCAGCTAACCATGAGGTTGACAAGAAAATGAAAATCACTACTGAAAAGCTGAATAAGAAATTCCATGGGATCTTACAGAATGGTCGTGAACTTGGCCTTCAACCAATCAAATTGCAAAGACAGAGTCGAATATCTGAATTTCCTGGGGATCTCTCACCCCAGTACACTCTTGTAGGAGATATTGAACAAGAAAAGTTGAAGTTGATCAACAAATTGACTGGCAGCGAAAGCACCAGTGCTGTCATTGCAATCTTTGGGTTGGGTGGAATTGGCAAGACTATGTTGGCACGAAAAGTACATGATGATCTCCTCACAGAAAGTGCATTCAGCACTGTTGTATGGGTAAATGGCTCCAAATCTTTCACTAAAAAGAAATTGTTACGTGCAATTCTAAGTTCTTCTGGTGGCAAGCCTGGAGAGGCAAAAAAAAAGAGCAATGAGCAAATTGAGGACATGTTGGTTACAATACTTGGAGCAAAGAAATTCTTACTGGTACTTGATGATGTATGGGCTGACCAGATTCATCAGGATTTTCTAAAAGTTAGCTTGCAAGCACAGCAAGGAAGCCGAATTCTGTTGACTACCCAGGATGAGGGAGTTCTGAGGCAAATTGCTTCTGATGACATCCACAAAGTAAACAAATTGAGTTTCCCCGATTGTTGGTCTCTGCTCTGCAGTAGTGCTTGCCTGGATGAACAGGATTGCGACGCATTAACAGATATTGGTATAACAATTATCCAGAAATGTAACAAGGTTCCATTGGCTATCAAAGTTTTGGGTGGTCTCCTAGGAACAAAGAACCCAAGAAGAGAGGAGTGGCAGGAAGTGATCAGTGAGAGTGAAGGGTGGACTCTTGAGAACGTTCCTGATGGCATGGAGGAAATATGTCTCCCCATCTACTTAGCCTATTACAGTCTGCCATATCATTTGAAATTATGTTTTGATTACTGCTTGCAGCTCCCTGAAGGATTTGTTATTAGGCCACAAATTGTTACTCAGCTATGGATAGCAGAGGGCTTTATTCAAGAACAAGATAACCGCAACCCTGAAGATATCGCAGAACAGTATTACAAGGAATTGGTTCTAAGAAATCTTCTGCAGCCTGAGATTGGGTGCTTTGACATGTCGAAATGCACAGTGCATGATTGTGTAAAGTCCTTGCTGCAACCTTCAACTAAAGACAAGAAATCAACAGATAGCACCGAAGGGACAAAGTTTTTTAGAAGCTTCAGGACAGCTTTTGTCTACAAGAATCCATCAGGAGATCGCGGCCTCAATTGGCTCATAAATTTGAGATCTCTCATAAATTTGAGATCTCTTGACCTTACTGGTACTTGCATTAGGTACATACCGAAGTCACTAGAACATCTACATCACCTTAGGCTCTTAAACCTCTCACTGACACAAGTTTTAGAGCTTCCGGAATCTATTGAGAGCCTCAGCAACCTGCAGTTCTTGATACTTCGGTGTTGCTATTGGCTCGAAACCCTGCCAGAGGAAATTAGTAATCTGGTCAGCTTGCGGAGCCTTGATTTGGAAGGGACTACACCACATATAGTTCTGTCAAGATTATCAGCCCTGGAGCAGCTAACTGCACTGCATGGTTTCATAGTAGACCACAATGCGGCAGTACCCGACAATGATCATCAGAACGGATGGCCTATGAAAGAGCTGAGTCCTTTGAAGTCATTGCGGAGCCTGCAGATAATGGGCATCGATAGAGTTCCAGATGAATCTAGGGCGCAAGAAGCTAACCTAGCAAGCAAGTCTCACCTCACACATCTTGAGTTATGTGGTAGTAGCACCAGTGATTCACAAGTCTTTGTACCAGAGGAAGAACAAGATAGATGGCTCAGTGTGCTTTGCGGTCTCCAACCTCCACAATGCTTGGAATATCTCAAAATAGCGAGCTATTATGGATCATCTCTTCCGGATTGGATATTGCAACTTCGAAACCTCCAGCGGCTTGTGCTTACCGATTGCAAACTATGTGATAGCCTCCCAGCATTGGGGCAGCTACAACAACTGAAGTTCCTCACAATCAATGGATGTCCCAAGTTACGCATCATCGAGTGGCGGACTGGTGCTACGACTAAACTGGTATTTCCAAAGCTAGAGCAGCTGGACCTCAGTGACATGCAGGCCTTGGAATCATTGGATAGGTTTAAACATGGTGACCTGCTTTCCCTGACCAAATTTCACCTAGAGAACAGTCCCAAATTGAGATCCCTCCCATCTGGCCTTGGTTACTGCAAGGTACTGACAAGTATGAAGATTGTTGGTGCTGATAGCCTCCAAGTGATTGATAACCTTCCTATGCTCAAGGAATTGGTTGTCCAAGACTGCAGAGAACTCGTCAAGATCTCAAATCTTCCAGTGCTTCAGGTCCTGGTAGTCGTTGATTGCTCCATGCTGCAAGATTTGAGGGGAGTTGGGGGCCTAAGGCATGTCCGCCTCGTGGACAGAGTGACGAAAGAACTTCCAGATTGGTTGACAGGCCATGAGGCTCCTCTGCTGCAAATATTCACCATAGTCGGCACGACAGAACTACTCAGGAAGTTAGTTCCCAACACCAAAGGTTGGTCGGCTATACGTAACATGGACAGAGTTTATGCAAATTTGCCTGATGGGGCCCCGTTCTTGGCCTACAACAAGGGCAAACCGGATTTTCAAATGATTAAGACAATTGTTAGCCCTCAATTGGAAGATCCTTCTGCAGACGTTATACTCGGCAAGCTTGTCAGAATGGCCTCACAAACTGGCCTGGCAGATACTGTAAAACGCTATTTCCTCCCTCCACTCGCCATTGCTCTTGTGTTTTTGCTGCTGGTGACCAGAGATTTTACGCTCATCGGAGTCTTCCTTGCCTTCTTTGCGGCATGTGTTGCTGGGTTTTCTGTGATATACATTCAGAAAACTTCAAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030016