BGIOSGA030020

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030020| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030020, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030020

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030020, complete gene.

LocusTag

OSJNBA0092O08.32

Ensembl Transcript ID

BGIOSGA030020-TA

Ensembl Protein ID

BGIOSGA030020-PA

Length

2653

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7375846..7378498

Sequence Coding Region

7378194..7378498,7377409..7378060),complement(7377081..7377280,7376734..7376977),complement(7375846..7376646

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7375846..7378498 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7375846..7378498 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGACGGAGGCGGAGGCGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCCGTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCGAGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTCATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGCAAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATGTACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGGAAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACCTGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCATGAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCCATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAGGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTGGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAACAAGAAAGGGAGGAAAGTAGCTGCAAAGCGCACCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MGTEAEAEAEAAEVVESVSDLAVQDPPGEEFSAADLRWVKYASSEHQRDDVALIPYERMDAFIAGECSNPECPTRFHIERGRKRDRGTLREVRSDDYLLYRMYWCSFGPENYGEGGTILPSRKYRLNTRNRAARPQSMRGCTCHFAIKRLYARPSLVLIIYHERRHINKSGFICHGPLDRDAIGPGARRVPYVGSEIQQQTMSLIYLGVPEENILQTHMEGIHRYCGSDAKVDSLASQYVQKLGMIIKRSTHELDLDDQASIRMWVDRNKKSVFYYQDSTDTDAFVLGIQTEWQLQQMIRFGHQDLLASHSSFGVSKLKYPLHTLLVFDSRQHALPVAWIITRSVTKQDTLRWMKALTERIYSVDSTWRIGGFVIDDPASELDPIRDVFSCPILFSLWHIRRTWLKNIIKKCSNSEVQREMFMQLGKVMYSIWSEKNPMDALEQLFQDFVDQTTFIQYFKSFWVPKLEMWIDTIRSLPLASQESSGTIEGYHLKLKVKAYDDSQLDALQRVDWLVHKLTTELHSSYWLNLYADESGSFPEVKAEYIASTSWHRALQIPDDAVIFDDKEPFSAKVTSQKDTSQMWTVWNPGSEFSLCDCSWSMQGNLCKHIIKVNMMCGPRKDFQPSLSFQSFQRVLLDLWQKPMDDSFSLDLSVAWVMQMQERIQKVTELATADGIAEVSNRLPIQWTNKKGRKVAAKRTSPLRVLPHSNGIVQKDFTPKKNRKRKRLSTVSG</aaseq>

Gene Sequence

<dnaseqindica>1..305#439..1090#1219..1418#1522..1765#1853..2653#ATGGGGACGGAGGCGGAGGCGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCCGTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCGAGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTCATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGCAAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATGTATGTGTCATGTATTTTTTTTTTTTGCTTCTATATTATTTGAATTCAGTGCTTGTGAAATTGCTAATCCTTGCTGACCACTGTTGTTGTGTTGTGTTGTGTTGGTGTGATGTTCTTGGATTGATCAATCCAGGTACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGGAAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACCTGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCATGAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCCATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGGTATTGGCTGCAGCAAAAACTGACAGTTCTGTACTTAAACTTCAAACACCTTTCCTTGTCTGTGATGTGTAATTATGCCGGCAAGGACTAGTTTTGTAATATATTTGACATTTTGCTCTTCTCTGCAGTATCCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAGGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGTATGACATGGTTTCCGACGATCAGTTCTAATTGTCCAATTTTTCCAACTGTAGCTATTAGCTGGTAATGAATTTCAAATCAATGTATGTTTCTCTGTTTCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGAGTAAGAATTTCGGGTAGCTGCTTCAGTTTATGCATCGCATTGTAGATTATTATGCAATGCTAATGATATTCCTAATATGCTTTTTAGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTGGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAACAAGAAAGGGAGGAAAGTAGCTGCAAAGCGCACCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030020

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030020&oldid=29224"