BGIOSGA030021

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030021| Description = Lipid phosphate phosphatase 2| Definition = Oryza sativa Indica Group BGIOSGA030021, complete gene.| tag = OSJNBA0092...")
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Gene Name

BGIOSGA030021

Description

Lipid phosphate phosphatase 2

Definition

Oryza sativa Indica Group BGIOSGA030021, complete gene.

LocusTag

OSJNBA0092O08.28-1

Ensembl Transcript ID

BGIOSGA030021-TA

Ensembl Protein ID

BGIOSGA030021-PA

Length

5300

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7360572..7365871

Sequence Coding Region

7365795..7365871,7364680..7364819),complement(7364477..7364559,7362484..7362702),complement(7362307..7362394
,7362115..7362224),complement(7361889..7361982,7361001..7361189),complement(7360831..7360890
,7360572..7360741

Genome Context

<gbrowseImage1> name=IndicaChromosome09:7360572..7365871 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:7360572..7365871 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTGTTCGGCACTGCCTGTTCCCATCTTCTCCTCCTCGTTTTCCACGCGTACGCTTTTCAAACTGTTAAACGCCTATATCCACTAATAATCCCTAATTACCACCACCCCTCCACTACCCACTTCCCCCACGACGCCGACGCCGACGAGGCAGCCAACCAACCGCCGGCGGCGGGGACGACCCGGCCCGCGATCGCGACGCCGAGCATTGCGGAGCCGATCTGCGGCGGCGGCGGGTGTGGGGGGCTCGAGGAGCCGCTGGTCGGGAAGAGGAGGAGGAGGAAGAACGGCCGCCCTGACACAATGGCAGATGTCTTAGGATGTTACACTATAAAGTCCCATGGAACCAAAGTGGCGAGACTTCACATGTACGACTGGATAATACTTCTACTCCTTGCTGTTATAGATGGACTGTTGAACATAATTGAACCTTTTCACCGTTTCGTCGGGAGGGACATGATGACTGACTTGAGATATCCATTGAAGGGCAATACTGTTCCCTTCTGGGCTGTTCCGCTCATTGGAATTGTATTGCCTTGTGCCATCTTTGGTGGAATTTACTTCAAAAAGAAGAATTTCTATGATTTGCACCATGGCATACTGGGGATCCTATACTCTGTGCTTATAACTGCGGTAATCACAGATGCAATTAAGGATGGTGTGGGTCGTCCACGCCCAGATTTTTTCTGGCGCTGTTTCCCAGATGGAAAGGATGTTTATGATAATGTCACTACTGGTGTCATATGCCATGGAGAGAAGAGTGTCATCAAAGAAGGTCACAAGAGCTTTCCAAGCGGGCACTCTTCATGGTCTTTTGCTGGTCTAGGCTTCCTTGCATGGTACTTAGCTGGGAAGATCACAGTTTTTGATCGTAGAGGTCATGTTGCAAAGCTATGCATAGTATTTCTGCCTCTTCTTACTGCTGCACTTGTGGCTGTTTCTCGAGTGGATGACTACTGGCATCACTGGCAGGATGTATTTGCAGGCTCTCTGATAGGTCTTACAGTCGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACGCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAATAACACCGCAAACTCCTACAGCGTGAGACCGACCGGGTTCGAGACTGTCAATGTCCCAGAAGGGCATGGTGGGATTGCTCTGAGAGACACCAACCTAGAGGCCGGCAGGAGACCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVFGTACSHLLLLVFHAYAFQTVKRLYPLIIPNYHHPSTTHFPHDADADEAANQPPAAGTTRPAIATPSIAEPICGGGGCGGLEEPLVGKRRRRKNGRPDTMADVLGCYTIKSHGTKVARLHMYDWIILLLLAVIDGLLNIIEPFHRFVGRDMMTDLRYPLKGNTVPFWAVPLIGIVLPCAIFGGIYFKKKNFYDLHHGILGILYSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKDVYDNVTTGVICHGEKSVIKEGHKSFPSGHSSWSFAGLGFLAWYLAGKITVFDRRGHVAKLCIVFLPLLTAALVAVSRVDDYWHHWQDVFAGSLIGLTVASFCYLQFFPYPYDADAFWPHAYTFQLAEASRNNNTANSYSVRPTGFETVNVPEGHGGIALRDTNLEAGRRP</aaseq>

Gene Sequence

<dnaseqindica>1..77#1053..1192#1313..1395#3170..3388#3478..3565#3648..3757#3890..3983#4683..4871#4982..5041#5131..5300#ATGGCTGTGTTCGGCACTGCCTGTTCCCATCTTCTCCTCCTCGTTTTCCACGCGTACGCTTTTCAAACTGTTAAACGGTGTGTTTTTTAATTTTCTATACAAAAGTTGCTTAAAAAAATCATATTAATCTTTTTTTTAAAAAAATAGCTAATACTTAATTAATCACGTGCTAAATGCTGCTTCATTTTACGTGCTAGGGAGTGAGGGCTGGGAATCCTGAACACCGCCTACATATTCCCAACATCCAACTCTTCGTTTTTCCCATACATACTTCCTAAACTGCTAAACGGTGTATGTTTGTTTTTTTAAAAAATTGTATGAAAAGTTGCTTAAAAAATCATATCAATACATTTTTGAAGTTTTGTAGTTATCATTTAATTAATCATATGCTAATGAGCCACCGCATTTTACGTGCGTGGTTCGGTCCCAACCTTCTTCTCTCCGGAACACGGTCTTAGGGGGTGTTTAGATCCAGGGGTGTAAAGTTTTGGCGTGTCACATCAGGTATTATATAGGGTGTCGCATAGAGTGTTCGGACACTAATAAAAATACTAATTACAGAATCCGTCAGTAAACCGTGGGACAAATTTGCTAAGCCTAATTAATATGTCATTAGCAAATGTTTAGTGTAGTACCACATTGTCAAATCATGGGAGCAATTAGGCTTAAAAGATTCGTCTCGCAAATTAGTCGCAATCTGTGTAATTAGTTAGTTTTTTAGCCTAAATTTAATACTTCATGCAGGTGTTCAAACGTCCGATATGTCATGATGAAAAATTTTAGGGTGGGATCTAAACAGGGCCTTAACCATAAAATTTTATAAAGTGTCACAATATATTACTAGTTAGGAAGTTACACTCAAACGGTTCAAATTCAAATTTGAAATCCACCAATGGCCCTCTTGCCCATTGTTTTCTTCTTGTCCTTTTAGAGATGTTGGGTACAGAGTACAGACTACAGACTAGAGACTAGAGAGAATAGACTAGAAAGCAACTGCTCCATCTTCTTTCCCTTTCATCCCTCCAAATTACCAATCTAATCAAACACTTAAGCCTATATCCACTAATAATCCCTAATTACCACCACCCCTCCACTACCCACTTCCCCCACGACGCCGACGCCGACGAGGCAGCCAACCAACCGCCGGCGGCGGGGACGACCCGGCCCGCGATCGCGACGCCGAGCATTGCGGGTGGGTACACGGAGATATTTTCTTCCTCCCACCTCCTCCTCCTCCTCCTTTTGCTGCCCTTTCACAACTGACAAGCTCTCTCTCTCTCTCTTCTCTCTTTGGGGGTGGTTCTTGGTGCAGAGCCGATCTGCGGCGGCGGCGGGTGTGGGGGGCTCGAGGAGCCGCTGGTCGGGAAGAGGAGGAGGAGGAAGAACGGCCGCCCTGTGAGTTCTTCTTACTTCCCCGCTTCAGTTAAATTTCTCCCTGATTCCATATATGGTTTTGTCTTTTTTTTCTTTATCACTTCTTGGATTTTTGTAGTTGTTGTTGCTGCTCACTGCGGATGCGTGTAGTTTCTCTTGGATTGGATTCTATATAGATGTTGAGTGCTTCCTCGTTACAGCTAGTTTAGGGTGCGGAGTTTACTGTAGAGATCACACTGGGGGATGGGAATGTTTGAGTGGTTCTTGATTGACGCGAGAGCTGGTTTGCGTTTTTCATTTATTTTTCTTTGCTAATGGATGTGCCTTCGGCCTCTAATCTCAGTGTTTAGTGTAATGAGATCGTTTTTTCCTCCTCATAGAGGATTGTTTGATTGCTGAGATTCTCTGTGGTTAGTGGTATGGAACCAATTTATCCTCCTAAATACCGAATTGTTAATCTGCTGGCTTCTCTGTGTTTAGTGGTACGGAACCAATTTTTCCTCCTTAATATCGAATTGTTAATTTTCGGTATGGAACCAATTTTTCCTCCTTAATAGCGAATTGCTAATTTTCTGGGCTTGGTTCCACGCTTCCAGTAGTAAGTAAGTACTGTGATTGGTAATTGTGATGTCATTACTCACAGCCACTGAAAACTTAGACATGGTCGAAGGGAAGGCATTTGATGTCATCCTTCCCCTTAGGCACAACATTGAGGTGACTCAGTTACTTGCTACCTTAAATCCTTAATGAGGCGCGACTTTCAAATGGGACGCAATTTTTTTTTTAAAATTCTAGTGGTTATTGATTGATGGTGCGAACCGACAGCAACTAGCAATCTTGAAGATGCCAAAGCGTTGAGATAACTGCTGGTTGGCTTGAGTTACAGTGTTGGTGAGCCGTTTGAATATAGGCTGTGCTTGGTGGGTCCAATCTCCAGTGAGAAGCATTTTATACAGCATGCGTGCAGTGTTTCATGGATTGGTTAGTAATCTAACACAATCACGAGGAGTTTTGGTTCTTTTGGTTTAAGTTATTTTGGATCTGACTTGGTCAGGCTGGGCATTATTGTTCAGCAACTTGGTGTGTTGGTTACATTGGAGTTTCTTAGTTCTGTACAGCAAGTTGCTCTGTAATTTTTAATTCTACTGGTATGTGCAAGTGTTGATTGTCTATCTAGGAGCTTAGTGTATAGACAAAAGCTTTATTTAATCTTTGCTTTGTTCACACTTGATTCCACATGTATTTTCTGATTTCTTAGCTTCCTGTAGTTGGAGTCTTTAAGTTTTCACCCTAATTTCTCTCAGTTGGTTTGCCTACCTGGGTTCAAGAAATTAACGAAGATTTCCTAGTTGCTTTGGCTTGGTTGCCTCTTTTGGTCTGCAGTATGTCAATATTTGTACTCTTTGTTGTACATTTCTCAATCGCTTGGTTGTGATCATGATCTTTGCTAGAAATATCTGAAATATTGTCAAATTTGTACCAGTAATTTTCAATGCATTACCTATGGACAATATAAGAATGTGAAATGTTTTCATAAAAAGTAACCAATGCCCAATTACGTATGATTTAACTGGTCTAGTTTCTACTGTTGGTATATACTGGAGGATATAAATATTTTTGCACCATGTACGGAAGCCTATTACAAAAGGATACGTTATCTTCTTGTGGGGCGGTTGCAAATTCTGGTATTCTTAGTTTTATTTTTATTATAGTTGCATCGTATCCACATTACATGGAGTTGTTATTATAACTCTAGTTACTCACTTTGCTTTCTTGTTATGTTTGTTATTTGAAGGACACAATGGCAGATGTCTTAGGATGTTACACTATAAAGTCCCATGGAACCAAAGTGGCGAGACTTCACATGTACGACTGGATAATACTTCTACTCCTTGCTGTTATAGATGGACTGTTGAACATAATTGAACCTTTTCACCGTTTCGTCGGGAGGGACATGATGACTGACTTGAGATATCCATTGAAGGGCAATACTGTTCCCTTCTGGGCTGTTCCGGTGTGTTCTTATGATGTTTCATCTGTTAATTATATTTGTGGACTTCAGAAAGCTATGATAGTTTTTTTAACTACTTTTCTGATTTCCAGCTCATTGGAATTGTATTGCCTTGTGCCATCTTTGGTGGAATTTACTTCAAAAAGAAGAATTTCTATGATTTGCACCATGGCATACTGGGTATTTTACATATTCTTGATCCTACCATTAAGTTGATAATATAAATAAAAAGGAATAATGCTTGACATTTTTTTTTTGGTAGGGATCCTATACTCTGTGCTTATAACTGCGGTAATCACAGATGCAATTAAGGATGGTGTGGGTCGTCCACGCCCAGATTTTTTCTGGCGCTGTTTCCCAGATGGAAAGGATGTAAGGTTCTTAGGCTAAAAACCTAAAGTGCACTTTTCTTCAAGCATGTTTGTGTTGATCTTCTCATTATTCAAATGTTTTATCTTTCTGAGTCTTAGTGGACCAGAACTCACTGAAGGACCTTCTTTCCAGGTTTATGATAATGTCACTACTGGTGTCATATGCCATGGAGAGAAGAGTGTCATCAAAGAAGGTCACAAGAGCTTTCCAAGCGGGCACTCTTCATGTAAGTGGTGACATACATAATCAACATACCTTTTTGTCCCGTTGTGCCTTTGGTAAATATTGACTTGTACATTATCATAGAGATGAAAATCATATATTCCTGAGGTACGGTAGTCACAAATTCTTCCCCATACAAAGGAAATGCTTTTGGCACAAGGTGTGCTGGGAGCTGGGAGCAAGAGATGACTAGCTCTAGGGCTGTAAATGCAATTGGTTCGGTAGTTTGCAGTGTCTGGCTTAGTGACAATAATGTGACTTGGAATCAGGAGCTTACGATCGCTTTGAGGCCTCAATTGGGCGTGGGCAGGGACTTCTTAATGCAGAAGCTAGTTTGGTGCAATGGTGGTTGGGAGCCAGCCGGCAATGTAGATAACTATGCAAGTAAGGCAGTGGTGTGATGTTGAATGGGCCTTCAATGTAGATACTTGGCTGCCAATGGAGTAGGGACAGTTGATCAGTATGTAGTATCAAGCATTTGGTTTCTTTATGCATACACCATTATGGAGTTGCATAGCCTGTAGCTGGACATAACTTGCTTACTGGCCTTATCGTGACAGTATGTGATTTCCTAGTGACCATACCAAGTTGCATTCCTTCAGTAGTGTATGCATATGTATGGTAGTGTTCCTACAATTATGTCATATGGTGCTGTGGCCAGACTATCTAACATTTTTGTTTTTGTTTATTTACACAACTCCAGGGTCTTTTGCTGGTCTAGGCTTCCTTGCATGGTACTTAGCTGGGAAGATCACAGTTTTTGATCGTAGAGGTCATGTTGCAAAGCTATGCATAGTATTTCTGCCTCTTCTTACTGCTGCACTTGTGGCTGTTTCTCGAGTGGATGACTACTGGCATCACTGGCAGGATGTATTTGCAGGCTCTCTGATAGGTTTGCAATTTCAATAATATAACAATTATATGCAAGAGGTCCTAGCACTATCTAAAAGGAAAAAAAAAATCCACAACCATTTCTTGATTCTGGCATTTCTCCTGTTGCAGGTCTTACAGTCGCATCATTTTGTTATCTGCAATTCTTCCCATATCCTTATGACGCAGACGGTACCTCTTTTTTTTTTCTTCTTTTACCTATATAATTCTAGATAACTGACATATCACAAAAGATGGTAACATTCCCCTTTTTTTTGCAGCTTTCTGGCCTCATGCATACACCTTCCAGCTAGCGGAGGCCTCGCGCAACAATAACACCGCAAACTCCTACAGCGTGAGACCGACCGGGTTCGAGACTGTCAATGTCCCAGAAGGGCATGGTGGGATTGCTCTGAGAGACACCAACCTAGAGGCCGGCAGGAGACCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030021

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030021&oldid=29225"