BGIOSGA030034

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030034| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030034, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030034

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030034, complete gene.

LocusTag

OSJNBA0062A09.7

Ensembl Transcript ID

BGIOSGA030034-TA

Ensembl Protein ID

BGIOSGA030034-PA

Length

4941

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6871947..6876887

Sequence Coding Region

6876724..6876887,6875368..6875491),complement(6874916..6875253,6874599..6874799),complement(6873718..6873801
,6872748..6872829),complement(6872561..6872674,6871947..6872255

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6871947..6876887 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6871947..6876887 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGGAGAGCACGCGGGACGAGTCCGGGCAACGGGCGCGCGGCGCGCTCCCTGGCGACCAAGACATGGAGAGTGCGCCGGCGAGGAAGCCCGCGAGGCCAAAGAGGAGGCAGGCGGCGGAGAAGGCCAGGGTGGAGAGGATGCAGCGGAGCTTGGCGCGTTGGGAGATGGCTGGGTATATGTCAAGAGGCCCCCCAAATGGCTCTGTTTATGTGTGCAATCTGCCTCCTGGAACCGATGAGACCATGCTGGCCGATTATTTTGGCACCATAGGGTTGCTGAAGAAGGATAAAAGGACCGGTCGTCCAAAAATCTGGATTTACAGGGACAAGGTTACCAATGAACCAAAGGGTGACGCAACAGTCACCTATGAAGACCCACATGCTGCTTCAGCTGCAGTAGAATGGTTCAATAACAAGGATTTCCATGGAAGCACCATTCAGGTCCATATAGCTGAGTCAAAAAACAAAGACACGTATGACAACTCGGCGAGTTTGAACAACTCTGCTGGCCTTGGTGGACAAGATGAATTGGACAACGGGGCAGGCAGAGGGAGAGGGCACGGTGATGGTCCAGGAAAAGCCTGGCAGCAAGATGGGGATTGGCTGTGCCCAAATACAAGTTGTGGCAATGTAAACTTTGCCTTTCGTGGTGTCTGTAATCGCTGTGGAGCTGCTCGCCCTGCCGGTGTTAGTGGATCAGGTGCCGGTGGTGGTGGTAGGGGTAGAGGCCGTGGAAGTGACGATGCAAAAGGAGGCAGCCGTGCTGCTGCTGTTGGTGGTCCTCCTGGACTGTTTGGTCCAAATGATTGGTCATGCCCAATGTGTGGCAACATAAATTGGGCAAAGCGGATGAAATGTAATATCTGTAACACCACTAAGCCAGGTCACAATGAAGGTGGTGTGAGAGGAGGCCGGGGTGGTGGGTATAAAGAACTTGATGAAGAAGAACTAGAGGAAGTTAAAAGGCGCCGCAAAGAGGCTGAAGAGGATGACGGGGAGATGTATGATGAATTTGGCAACCTCAAAAAGAAATTCCGTGCTAAAACACAGCAAACTGAAAATGCACCAACCCTTCCTGGGTCTGGACGGGCTGGATGGGAGGTTCAACTAGAAGAGAAAGCAGGGAAAGGAGCAGAGATCGAGGCAGAGACCATGACTACAATGAACGGGATAGCAGGAACAGAGATAGAGGCAGTCATGGGAGGGAGCGGCGCCGAAGCCGAAGTAGAAGTAGAGACCGTGAGAAGGAAAGAGGGAGGGACAGGGGCAGAGACCACAGCTATGAGAGGAGCTGGGAGCGAGGAGCCGAGCGTGACCGTGATCGCTATAGGTGAATACTTCATGCCAGAATCATCACACGCTGCATGCCGATTTTTGGTTTTCCGATACTTCTGTTTTGTTGCTGGATAG</cdnaseq>

Protein Sequence

<aaseq>METESTRDESGQRARGALPGDQDMESAPARKPARPKRRQAAEKARVERMQRSLARWEMAGYMSRGPPNGSVYVCNLPPGTDETMLADYFGTIGLLKKDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHAASAAVEWFNNKDFHGSTIQVHIAESKNKDTYDNSASLNNSAGLGGQDELDNGAGRGRGHGDGPGKAWQQDGDWLCPNTSCGNVNFAFRGVCNRCGAARPAGVSGSGAGGGGRGRGRGSDDAKGGSRAAAVGGPPGLFGPNDWSCPMCGNINWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVQLEEKAGKGAEIEAETMTTMNGIAGTEIEAVMGGSGAEAEVEVETVRRKEGGTGAETTAMRGAGSEEPSVTVIAIGEYFMPESSHAACRFLVFRYFCFVAG</aaseq>

Gene Sequence

<dnaseqindica>1..164#1397..1520#1635..1972#2089..2289#3087..3170#4059..4140#4214..4327#4633..4941#ATGGAGACGGAGAGCACGCGGGACGAGTCCGGGCAACGGGCGCGCGGCGCGCTCCCTGGCGACCAAGACATGGAGAGTGCGCCGGCGAGGAAGCCCGCGAGGCCAAAGAGGAGGCAGGCGGCGGAGAAGGCCAGGGTGGAGAGGATGCAGCGGAGCTTGGCGCGGTAGGAGTTGGTCGCCGAGGAGAAGACCTTCGGTGAGCTCGGCATGGCTTCGGCGAACTTGCCGGCCGCCGCCGCGTGGGTCAGCGAGGAGCGCCGAATCGGAGCCGGGGGAGATGAGGAGGGAGTGGTGGTGGTGGACGCTGTCGACGGCGCGGGGCGAGCGGGGGAATGGGCGAGCGCGGGCTGGCGGCCGACGATGGCATGGGCCAAAGTTAGGTGGGCGGCGACCAGAGGTAGAGAAGAAGGTGAGAAGATGGGCTGACGGGTGGGGCCCTTTCCACGCTGGCACGCACGGTGGCACGCCACGTAGGCAAAAGTGGCAAATAGTTAAGAAATTACCTCTCTCCAGTGGTAAATTATTAAGTGCAAACTTAAAAGGAGTATTTGGATAATTGGCAAACCTAAATCTGGCAAATAGTTAAATTCCCCGCCTAGAAGGGGTGCCTTCGTGCTCGCTGCTTCTGTAACCGGCGCGCACGCGCCGAGTAGGAAAACACAAGAAACTCGAGCTGGATATAAAGTAAACTTTTTCCTTCTTGTATTCCAACCCCAATTCGACCGACTGCTACCATTGAGCCCAGCCTCCATCCAGGCCGGCCCATTTCGCCCTAGTTGGCCTCATAAAGCCCAACCCACCCACTCGACCTCCGCATTTCACCCCTCTTGGCCTCCTCTCCTCTCCTCTTCCACCACCACCCGCCGCCGCCGCCTCCGCCGCGTGGTTCGCCTCCGCCGCCCGATCCCCTCCTCCGGGCTCGCGCCTCGAGCCGGAGCGCCGCAGGTGAGCCAGAGAGTCCCCCCGTCCCCCGCCCTTCCTTCACCTAACTCTAGGGCCCGAGCGATCTGGTGTTCTGGTGCGCTAGGGTTCTCGCGTGGGGGGTTGGGTTGGTCGACCGTGCTCTCCGCGATCTAGGGTTTGTGGCTAGGGCGGCTCTGAGCTGCGCGGAATTTTATTCTGTTAGGGGGTCCTGCTAGTCGACAGCTGATATGATGTGTGTGGTTGAAGTTATTACACTTTGACTTGTTCATGATGAAATATAAGACTCTTCGATGCTTCGTTTTAAGTTATACTCCTTATTACTGATTGTTCATATGTATGGCCTTTCATTGTTGGATTAGTTTGTAGTACTTGCCCTTTTTAGTTTACTGTTGATTATTAGTAATATTGCATCAAGGATCAGTGGCTCGATTTAAATAATAATGGTACTAATTTTCTGTAATTGGGCTATCAGTTGGGAGATGGCTGGGTATATGTCAAGAGGCCCCCCAAATGGCTCTGTTTATGTGTGCAATCTGCCTCCTGGAACCGATGAGACCATGCTGGCCGATTATTTTGGCACCATAGGGTTGCTGAAGGTATGGATGGGGGTCTTCCCAGGCAACATTTTTGTAGCTGATTAAAAGATTCTTCAAGCCTTTGTCGCTTCATTTTCATGGTAATTAGTCATTTTCTGTTGTTGATCTCAACAGAAGGATAAAAGGACCGGTCGTCCAAAAATCTGGATTTACAGGGACAAGGTTACCAATGAACCAAAGGGTGACGCAACAGTCACCTATGAAGACCCACATGCTGCTTCAGCTGCAGTAGAATGGTTCAATAACAAGGATTTCCATGGAAGCACCATTCAGGTCCATATAGCTGAGTCAAAAAACAAAGACACGTATGACAACTCGGCGAGTTTGAACAACTCTGCTGGCCTTGGTGGACAAGATGAATTGGACAACGGGGCAGGCAGAGGGAGAGGGCACGGTGATGGTCCAGGAAAAGCCTGGCAGCAAGATGGGGATTGGCTGTGCCCAAATACAAGGTCTGTTTTGATTGGTAAGAGGCTTCCCTGTCACTTAATTTCTTTTGCTGACTAGTATAGTAGTATGGTCATCACCGCGTATTCAAAATCCTGTCTGATATTGCTTCCTCTCCCAGTTGTGGCAATGTAAACTTTGCCTTTCGTGGTGTCTGTAATCGCTGTGGAGCTGCTCGCCCTGCCGGTGTTAGTGGATCAGGTGCCGGTGGTGGTGGTAGGGGTAGAGGCCGTGGAAGTGACGATGCAAAAGGAGGCAGCCGTGCTGCTGCTGTTGGTGGTCCTCCTGGACTGTTTGGTCCAAATGATTGGTCATGCCCAATGTAAGAATACCCACATAAGTTTGCTGTTTCATGACTTCTTCTGTCCTTACCTTATTTGTATTTGTTATTAGCTGTTGCATGCCTGCTTGATGAATCCAATTGTGCTGTGCTCTCTATGACTATTTATGCCTGTTCAAATCTTCAATATTATTTCTACCCTGTGTTTATGCAGGAATTTTGGAGAAGCACTAAATGTTGGTAATCAAGCTGTTAGAAATTTAAATTTCATAGGTGTTATAACTCAATCATCTTAAACTTTAGTGACTGAAAATCAATTTTGCAATATACTCCCTCCGTCCCACAAAGACTTTATTTCTAGCATTCAAAATTTGTCCCACAAAGACTTCATTTCTATATGTTGCAGCCAATCAAGCTAATGCACACACGTTTAATTGGAGCCTAGGAAATACAACCAAGAGTATTAATGAGGGGTACCATAGATATTTTTTCTCCCTACTACTAATTTGTCTGAAAATCGCTAGAAATGATGTCTTTGTGGGATGGAGGGAGTAGTTATTAGTGAATGGCGACCTTGTAATCTTTCATTCTTGTTACTAACCTACTATGGGGTCTAAGCTTTTCAATAATGTTTCGTCAAACCGTTATTTCCATTAACACAAGTATTTTGTAACTTCATTAGGATGATGACCTGTTGGTGTCTCCTCAGTCCTATGGGATTGTAGTACTAATATTATGTATTGACTAAATTGATCAACAGTAATAAAAGCATCATGGTTGTACCATGTACTATATTATAAAACCGCATATGTGATGATAAATAATTTAATGTTTTCCAGGTGTGGCAACATAAATTGGGCAAAGCGGATGAAATGTAATATCTGTAACACCACTAAGCCAGGTCACAATGAAGGTGGTGTGAGGTAAGACATGCACAACCTGCATGTGGCATGTTCATTGCTTTGCCAGTTAAATAGTCGAAATGTATTATTTGCCTTTGCTTTGGCATGAACTATGGTGAGCAATTTATGTAAAGCAAAGCACTACATTTACCTGTCCTGCTCATGTCTAAATTAGAGTACACTCATCACACCCTGGTTTGTGGTGACTGATTTTTGGCTATAATTTGGCAGACTTTGGAATGTAGTTGCCTCAAAAACTGGTTACACAGTTACTCATTGGCATTCTTTTTTTTTTCATTTTTGGCACATACGAATAGCATGGTAACTACAGTGCTACTCTGTTTTCTTGTAAACAGTTTTGGGCTTTTGGTCTCATTTGAGCAACACTAGACACAAATTAGAGCGATATGCTGTTGCATTTTATCCTATTTGTTTGGCATGACTGTCTGTGAACCTGTGGTGATGACAATTAGTGCACCTAGCTGACAGTCACACGGTGCACCTTTTGCCAGTTGTAATATAGAGTTATGACAACACAATTGGGTGCAGTACTGCAGTATGTTGTTATGACAACATAGTTGGGGCACCATCAGTGGAAACGTTCCCCATTTATTGATGATTTAGCACCTTTGAAATTCAACTTCAAACTCAAGTGTCGAAATAAACATGAAAAGGAAGATTATTATGATGCAAAGTTTTTCCTTTACTTTTGATTGACTTCCTTTCTGTTAATCTTTACACTCAACATAGAATTTTTAACATGAAATTGTACAAAAAGGCATGGTAAAATGAGAAGTGCATGTGGTTGCATTACCCATAAAATCAACTCATGTAATTGTTAATTATTATACATGAAATTGTAAGTCTTTCAATCATGAGACTTTTCTCACCAATTACATTTATTTGCAGAGGAGGCCGGGGTGGTGGGTATAAAGAACTTGATGAAGAAGAACTAGAGGAAGTTAAAAGGCGCCGCAAAGAGGCTGAAGAGGTGGGACATGTTATTTGATGTCCCATGTGTCAAGTCATGAGTTTTCATCTAAATGTTTTTTTTCCTGTTATAGGATGACGGGGAGATGTATGATGAATTTGGCAACCTCAAAAAGAAATTCCGTGCTAAAACACAGCAAACTGAAAATGCACCAACCCTTCCTGGGTCTGGACGGGCTGGATGGGAGGTTGAGCAACGTGGTATTACATGCTCATTTCAGTTTCTTTTGTTAATTAATTCCGTTTGAATTTGTGTGTAGTCCTATCACATGTTCTTGGTAAATTATTATTGTAGAGGACTAAACATTTGCTATGCTTATTAACATAGGATAAGTTCAAACTACACCTACTTTATGATTTGTACTTGTGCACTTCAACAAATCACAAAATAGATACACATATTTCTGGACAAACAAATTACTTTCTGGCACAGAAATCTGATTTACCCCCTTTTTGTATTGTACATGATAATATTTTTCCATCATCATTATAGGTTCAACTAGAAGAGAAAGCAGGGAAAGGAGCAGAGATCGAGGCAGAGACCATGACTACAATGAACGGGATAGCAGGAACAGAGATAGAGGCAGTCATGGGAGGGAGCGGCGCCGAAGCCGAAGTAGAAGTAGAGACCGTGAGAAGGAAAGAGGGAGGGACAGGGGCAGAGACCACAGCTATGAGAGGAGCTGGGAGCGAGGAGCCGAGCGTGACCGTGATCGCTATAGGTGAATACTTCATGCCAGAATCATCACACGCTGCATGCCGATTTTTGGTTTTCCGATACTTCTGTTTTGTTGCTGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030034