Os10g0548300

From RiceWiki
Revision as of 08:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0548300| Description = Protein kinase domain containing protein| Version = NM_001071835.1 GI:115483265 GeneID:4349299| Length = 5658 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0548300

Description

Protein kinase domain containing protein

Version

NM_001071835.1 GI:115483265 GeneID:4349299

Length

5658 bp

Definition

Oryza sativa Japonica Group Os10g0548300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21909363..21915020

Sequence Coding Region

21909574..21909795,21910008..21910775,21910898..21911467,21911777..21911882,21912557..21912661
,21912766..21912887,21913776..21913820

Expression

GEO Profiles:Os10g0548300

Genome Context

<gbrowseImage1> name=NC_008403:21909363..21915020 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21909363..21915020 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaatgtggacaactatctggaccagtgctcaagaaaaaaggttaaagctgagaaagaagtgttcttttttaccaaaattgacgaaggacttcttcatctgatagaaatatatggggtcactaaacttgttatgggtgctgcatcagacagacactacaaaagaaaaatgaaagcaccacaatcacaaacagcaataagtgtgatgcaaagagcacattcatactgcaatatatggtttatttgcaacgggaagctaacatgtgtcagggaggccagttgttgccctgtaaaaaggtcaaaatcagcacgcctaccttcttctgtagacagttgcaaggtggatcttcaaagtttgcttgagcctaatatagaggctaaaagattgggatgcatgtatattaatgaaatggaactaaggaaagagacagaggcaaaactctcacaagaaaaggaagagtcagaatctctcaaacatgccactatggtgctccaaaatgacctggactggctcaaatatcagttgaatgagaaagccaatagattacaagatctaaaccaacagaagcacctccttgaacaccgcatctcagagtcagactcagttgccacttatctagaagagagcatgaaggttacggaatctcgtgtccagtcactgaagttagagtacagtaaaatgaagcgagagcgagatgatgcagttaaagaggcaaggagcatgcgtatagagaaggagctgacgaattcttgtgcctatggagcaataagctctgagttctccttgatggagttggagcaggcaactcagaatttcagcaatgcacttaacatcggtcaaggtggatttggatctgtatacaaaggttctctgcgcaatacgacagtagctataaagatgcttagtactgacagcttgcatggccaatctcagttccatcaagaggttgctatactcagtagagtaaggcatccaaacttagtcacccttattggagcctgcactgaagcttcagcgcttgtttatgagctcttaccaaatggaagcctggaggaccgactcaactgtgttgacaacaccccgccactcacttggcaagtgcgcatccagatcatcacggagatttgctctgcacttatcttccttcacaagcaccggcctcacccagtggtgcatggggacctcaagccaggcaacatccttcttgatgcgaatttgcagagcaaactcagtgattttgggatttcacgcctccttctggagtccagtgtcactggaagcgacgcacactacacctccaggcctatgggaacaccggcatacatggacccagagttcttcgccacaggggagctgacgccacagtctgatacttactcttttggtgttaccatcatgcgtctcttgaccggacgggcacctctacgcctgattaggacagtgcgggaggcgctgaacgactatgacctgcagtcagtgttggaccattctgcaggtgactggccattggtgcatgtggagcagctcgcacacattgcgctgcagtgcacagagctcagcaagcagaggcgccctgatcttgagcatgatgtgtgggaggtgattgaacctatgaagaaggaagctcattcgccattgtcccagtcttttcgatctatctgtagtgccattgaaactgccaccccgtcctacttcctttgcccaatctctcaggtgaccatgagagatcctcagatggcagcggatggcttcacctatgaagctgatgctataagagattggctggataagggacatgacaggtctccagtgactaaccaaacacttgctaactgtgacactatccccaatatcgcactgcgttcggccattcaagaatatctcaagcagaacaacatgaacaagtcatttgcactatatgaacagcagcattag</cdnaseq>

Protein Sequence

<aaseq>MQNVDNYLDQCSRKKVKAEKEVFFFTKIDEGLLHLIEIYGVTKL VMGAASDRHYKRKMKAPQSQTAISVMQRAHSYCNIWFICNGKLTCVREASCCPVKRSK SARLPSSVDSCKVDLQSLLEPNIEAKRLGCMYINEMELRKETEAKLSQEKEESESLKH ATMVLQNDLDWLKYQLNEKANRLQDLNQQKHLLEHRISESDSVATYLEESMKVTESRV QSLKLEYSKMKRERDDAVKEARSMRIEKELTNSCAYGAISSEFSLMELEQATQNFSNA LNIGQGGFGSVYKGSLRNTTVAIKMLSTDSLHGQSQFHQEVAILSRVRHPNLVTLIGA CTEASALVYELLPNGSLEDRLNCVDNTPPLTWQVRIQIITEICSALIFLHKHRPHPVV HGDLKPGNILLDANLQSKLSDFGISRLLLESSVTGSDAHYTSRPMGTPAYMDPEFFAT GELTPQSDTYSFGVTIMRLLTGRAPLRLIRTVREALNDYDLQSVLDHSAGDWPLVHVE QLAHIALQCTELSKQRRPDLEHDVWEVIEPMKKEAHSPLSQSFRSICSAIETATPSYF LCPISQVTMRDPQMAADGFTYEADAIRDWLDKGHDRSPVTNQTLANCDTIPNIALRSA IQEYLKQNNMNKSFALYEQQH</aaseq>

Gene Sequence

<dnaseqindica>5226..5447#4246..5013#3554..4123#3139..3244#2360..2464#2134..2255#1201..1245#ggtggcttccccctcgccgacggcgaggcgggcgaccccggtgggatcctgtgagccggcgacggcttcccccaactcccgcctcgccgcgcgccgatgttgccgtctccctgcgcgattccgccgccgccgcgatgtatttattcggtgttcgccatttctagtcaatcgtcaaaggtgatttgactgtaccacgatgatttaatttcatatgcagtactggtgatgatgagatgtttgcttgttgtcaattttgttcgcctcaaatttcatatgctattattgctgaatcgtcactacccgtaggttgtttctcccgttcatatggagtaactgaaatatgaggccgagatctttagattagatcaccagatagactgatggctctatcactggcacacaatcgatgcactacatcttttttttattagaaatgaaaggcagggaatttgtggtgagcaatgggggtgaaggatgtgagaaaggtagagtcttacattaattcataacatgtccctgttcccagcaaattttgccgtgttgtactggcatggcatgacagcgtaccaaatgactttcctcagataatccattcactgcgacttggtagttgagtgttgcgttgtcttccgatagtctcagtcaagagtcaacctttttacctggttaaactggaatcttattctttaatgctaatacgcagtgtgttccctcttttagttgtccaaagtgggaaacgcaaactggtagatagaagtatctcttagttccatcttcaaggccttaccagttgcatgcatgagtatgatgctcaggcagaaaactctgtttagagacaaggtttatgttgctctccctgagcaacccaccgatggcaagtccatactgtcttgggttatcgatcatgcatccagtagcacggagatcatcatcatccacataattactacatcgaactttggttagttatgtgcagtggctttatctaaagttatttttctcgatgtcaataaaggaggtgatatagtcatatagctatcttatgatgtttgtaccataatctttagcttctggctttctgccatattctggtttatttcctctaaccattacttcttgtttctattgtgttttcggttgcataatccttagcaaagttctattgtcttagttgattccttttttgctgaagaaagccggatgcaaaatgtggacaactatctggaccagtgctcaagaaaaaaggtgcaagataatgatattttattttgttttctgaaaagttcatgtaaaaaatatttttattcactctccccacaaagacttctatgagtaaataactaattatagaacataaggaaaaaaaaagtaacaccaagcaagagtgaaaatggttatttttttacttgatatgtccaaatactgattgttcatatattataactgaagatagttcttatagtagtattatcattgcacaaccaaagccacgtccaggtattttttttcgtctaaacaaaaacagttggtattgaagtagaattattttacaaaggtacaaaaatccactccgtgctaatgaaggttggggacatctcttccataaagaccattcgtaggaaatttatacagggtatcttgttttgggtagaagcaagttttggaagaactagggggattttctattttattttattttattttatttttgctgaagctttcaccatatctatttttgcattgattttttttttctgaatactataatgaaccctctggttccatttttttatgtgacaaaactgtaaaaaatccatatttcaaaccctggttaggtaataatccaaaattttgttttaaactgatcgagattaacagggcatcaaggctttctgccacttgtatgctgaatcatatgaatcactgaggtttacatattgaagtcaacttgtttgactatctatggatgcatgttctgcaattctgttctatctattttatccatgatgttgaaaacaaaaaatcgattgcaataagttaacatattttgtaaagaaagtttagggggaaaattaatgcaaaaagtaatatttacttcatcagagggcaaatttcttattcttccttgaccaggttaaagctgagaaagaagtgttcttttttaccaaaattgacgaaggacttcttcatctgatagaaatatatggggtcactaaacttgttatgggtgctgcatcagacagacactacaaaaggtttctctctcttctctttctctgagttctaacaatcgtggtacagtttcacgttatcagttcttattgattgtgacaaaaatatgactatttttgttgcccagaaaaatgaaagcaccacaatcacaaacagcaataagtgtgatgcaaagagcacattcatactgcaatatatggtttatttgcaacgggaagctaacatgtgtcaggtagggcttcaactaccaaatgggactcttatataaatctgactttattttattgtatttatcttaagccccagttttggcattatttcacagcaaggaatctcaacataacagtacaatatgcagcttaaaataatcacatgtaaatctttcagtatagggcctataggcagccatatgattgatacttcagttttgaaactccaaggcaccgaatcggtattaattggacaaataacagaagggatcacaatcttgactgtttaccaagcatgctgtatgtaactgaaggacgaatagttttccagaatcaaagatcacaagcctattgcagcagataaattctggcagaacttcacatatttagaatgagtagaactgagaaaaaaacatgtgtacatttatttttgccttgtatattctttctttgcgaatactttgtcctgtatatgttattaggacagtctaggttatggtcgagtttgtaccatatttagctgatctacaattcgacatgccttatcttataactatctgcattttgtcatgtaaagtatctgttatttttccataagagaatgattatcacaagtttattgaagcctaaataattcttaatttttcactactttgaatttttcttccactaaacgtctctgtttcttttcgcctagggaggccagttgttgccctgtaaaaaggtcaaaatcagcacgcctaccttcttctgtagacagttgcaaggtggatcttcaaagtttgcttgagcctaatatagaggtaaataccactttgtactacaattaacatgagcttttctagcgcggcttagtagatgttcacacaggaagaccattaagcatgtacttcagagataccaagaggtctctaaaactgttctgaagttaggaatgtggaaatgctataataaactcgaaacaaaatgaaacaaggtagtcttggctcagcaggaagaagttaaaatagttttactctgtgtttcagatcctttgcgcttggtatgccgtattatataatatccaaacttttacagtattttctgttaacaatcgctgattgcatttgcaggctaaaagattgggatgcatgtatattaatgaaatggaactaaggaaagagacagaggcaaaactctcacaagaaaaggaagagtcagaatctctcaaacatgccactatggtgctccaaaatgacctggactggctcaaatatcagttgaatgagaaagccaatagattacaagatctaaaccaacagaagcacctccttgaacaccgcatctcagagtcagactcagttgccacttatctagaagagagcatgaaggttacggaatctcgtgtccagtcactgaagttagagtacagtaaaatgaagcgagagcgagatgatgcagttaaagaggcaaggagcatgcgtatagagaaggagctgacgaattcttgtgcctatggagcaataagctctgagttctccttgatggagttggagcaggcaactcagaatttcagcaatgcacttaacatcggtcaaggtggatttggatctgtatacaaaggttctctgcgcaatacgacagtagctataaagatgcttagtactgacagcttgcatggccaatctcagttccatcaagaggtactattcaaaggcctatcatccatttgtataatattgcattgaaaaaacggaactaagataagctaatcattattaaaagttaagctaatgcattctgccgttccaatttgttttcacaggttgctatactcagtagagtaaggcatccaaacttagtcacccttattggagcctgcactgaagcttcagcgcttgtttatgagctcttaccaaatggaagcctggaggaccgactcaactgtgttgacaacaccccgccactcacttggcaagtgcgcatccagatcatcacggagatttgctctgcacttatcttccttcacaagcaccggcctcacccagtggtgcatggggacctcaagccaggcaacatccttcttgatgcgaatttgcagagcaaactcagtgattttgggatttcacgcctccttctggagtccagtgtcactggaagcgacgcacactacacctccaggcctatgggaacaccggcatacatggacccagagttcttcgccacaggggagctgacgccacagtctgatacttactcttttggtgttaccatcatgcgtctcttgaccggacgggcacctctacgcctgattaggacagtgcgggaggcgctgaacgactatgacctgcagtcagtgttggaccattctgcaggtgactggccattggtgcatgtggagcagctcgcacacattgcgctgcagtgcacagagctcagcaagcagaggcgccctgatcttgagcatgatgtgtgggaggtgattgaacctatgaagaaggaagctcattcgccattgtcccagtcttttcgatctatctgtagtgccattgaaactgccaccccgtcctacttcctttgcccaatctctcaggtactacaagttagaaaggtactccctctgtcccaaaatatagctacttttagcttacaaattcataagctaaaggtagctaaattctaggatggagggagtagaatttataagttgctgccgttgtttcgttagaaactgttaccgatgcttccagcattgcttctcgtctgaaactctaataacgatttactgcaattgcatatcttcaggtgaccatgagagatcctcagatggcagcggatggcttcacctatgaagctgatgctataagagattggctggataagggacatgacaggtctccagtgactaaccaaacacttgctaactgtgacactatccccaatatcgcactgcgttcggccattcaagaatatctcaagcagaacaacatgaacaagtcatttgcactatatgaacagcagcattagtggcctgtattgagtttcatctgtgcttcgactgtaatagatcgtttctgtgccagtaagaaactaaggaggtagtgttagaatagtgtttttcttttttcagttgagctgtaaacctaagttaaaacttaggaaccaattcttttcattttacctgagtttttgaaaattaagggttgggtcttctttgaactaattcatgtggaaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0548300, RefSeq:Os10g0548300