BGIOSGA030039

From RiceWiki
Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030039| Description = ADP-glucose pyrophosphorylase small subunit| Definition = Oryza sativa Indica Group BGIOSGA030039, complete gene.| ta...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030039

Description

ADP-glucose pyrophosphorylase small subunit

Definition

Oryza sativa Indica Group BGIOSGA030039, complete gene.

LocusTag

P0592C05.40

Ensembl Transcript ID

BGIOSGA030039-TA

Ensembl Protein ID

BGIOSGA030039-PA

Length

3731

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6767691..6771421

Sequence Coding Region

6771212..6771421,6770293..6770589),complement(6769540..6769809,6769270..6769449),complement(6768987..6769090
,6768775..6768886),complement(6768497..6768595,6768304..6768423),complement(6767691..6767807

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6767691..6771421 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6767691..6771421 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGATGGCGATGGGCGCGGCGTCCTGGGCCCCGATCCCGGCGCCGGCGAGGGCGGCGGCCGCATTCTATCCCGGCCGCGATCTTGCGGCGGCGAGGCGGCGGCGTGGGGCGGCGGCGGCGGCGAGGAGGCCGTTCGTGTTCACGCCGCGTGCCGTGTCGGACTCCCGGAGCTCGCAGACGTGCCTCGATCCGGACGCCAGCACGAGTGTTCTTGGGATCATCCTTGGAGGTGGTGCTGGGACAAGGCTGTATCCGCTGACAAAGAAGAGGGCGAAGCCGGCGGTGCCGTTGGGTGCCAATTACAGGCTCATAGATATCCCGGTCAGCAACTGTCTGAACAGCAATGTGTCGAAGATCTATGTCCTGACACAGTTCAACTCCGCATCGCTCAATCGTCACCTCTCGAGGGCCTATGGAAACAACATTAGTGGTTACAAGAACGAGGGGTTTGTTGAAGTTCTTGCTGCGCAGCAGAGCCCAGAGAATCCTAACTGGTTTCAGGGTACTGCAGATGCTGTGCGACAATACTTATGGCTATTTGAGGAACACAATGTTATGGAGTTTCTCATTTTGGCTGGAGATCACCTGTACCGTATGGACTACCAAAAGTTCATTCAGGCCCACAGAGAAACAGATGCTGATATAACCGTTGCTGCGCTGCCCATGGATGAAGAACGTGCTACAGCATTTGGCCTTATGAAGATTGATGATGAAGGGAGGATCATTGAATTTGCAGAAAAGCCAAAAGGAGAGAAGTTGAAATCAATGATGGTTGACACTACCATACTTGGCCTTGATACTGAGAGGGCAAAGGAATTGCCTTACATTGCTAGTATGGGAATCTATGTTTTTAGCAAAGATGTGATGCTTAAGCTTCTCCGTCAAAATTTCCCTGCTGCAAATGACTTTGGAAGCGAGGTTATTCCTGGAGCAACAGAAATTGGAATGAGGGTGCAAGCTTACTTATATGATGGTTACTGGGAAGATATTGGTACTATAGAGGCATTCTACAATGCCAACTTGGGGATAACCAAGAAACCTGTGCCAGATTTTAGCTTCTATGACCGTTCTGCCGCAATTTATACGCAACCTCGATACTTGCCTCCATCAAAAGTTCTTGATGCTGATGTGACAGACAGTGTTATTGGTGAAGGTTGTGTTATTAGACATTGCACAATCAACCATTCTGTGGTTGGACTCCGGTCCTGTATATCTGACGGCGCAGTGATAGAGGACTCTCTGCTAATGGGTGCAGACTATTATGAGACGGAGACGGACAAGAAAGCCCTTTCTGAGACTGGTGGCATTCCCATTGGTATTGGAAAGAATGCACACATCAGAAAAGCAATAATTGACAAGAATGCTCGTATTGGAGAAAATGTTAAGATAATCAATGTCGACAATATCCAAGAAGCTTCAAGGGAGACTGATGGATACTTCATCAAAAGTGGCATTGTCACTGTGATCAAGGACGCCTTAATCCCTAGCGGAACAGTCATATAA</cdnaseq>

Protein Sequence

<aaseq>MAMMAMGAASWAPIPAPARAAAAFYPGRDLAAARRRRGAAAAARRPFVFTPRAVSDSRSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNVSKIYVLTQFNSASLNRHLSRAYGNNISGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDYQKFIQAHRETDADITVAALPMDEERATAFGLMKIDDEGRIIEFAEKPKGEKLKSMMVDTTILGLDTERAKELPYIASMGIYVFSKDVMLKLLRQNFPAANDFGSEVIPGATEIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAAIYTQPRYLPPSKVLDADVTDSVIGEGCVIRHCTINHSVVGLRSCISDGAVIEDSLLMGADYYETETDKKALSETGGIPIGIGKNAHIRKAIIDKNARIGENVKIINVDNIQEASRETDGYFIKSGIVTVIKDALIPSGTVI</aaseq>

Gene Sequence

<dnaseqindica>1..210#833..1129#1613..1882#1973..2152#2332..2435#2536..2647#2827..2925#2999..3118#3615..3731#ATGGCGATGATGGCGATGGGCGCGGCGTCCTGGGCCCCGATCCCGGCGCCGGCGAGGGCGGCGGCCGCATTCTATCCCGGCCGCGATCTTGCGGCGGCGAGGCGGCGGCGTGGGGCGGCGGCGGCGGCGAGGAGGCCGTTCGTGTTCACGCCGCGTGCCGTGTCGGACTCCCGGAGCTCGCAGACGTGCCTCGATCCGGACGCCAGCACGGTACGCCGCGATCTCGCCGCCGGTGCCCAAAAAAATTCTACTCTTCCAGCGCTCGCTTTTTTCTTTGCGTTCACGTGGGAGAAAAGTTCGGATCCTTTTGGGTTGGGAAAATCGAAGGGTCGTTCTTGGGATTCGATGTTTGCGGTTATTTTACTCGACACATTTGGATGAGCGAAATGTGTTTGATATGTTTCTTGTGGGGATTCCTGCGAGTGCGAAGTGTTTGTTTTTTTTAGAGTGTTCTGGTGTCGATTTCTCGGTGATTCTATCAGCTGTTGCGTTCAGTACTCTCTGTGATTCAAGAAACGGTGGAAAGATGATGGTGACAGTATCTCTAGTTTAGTTGTTGGATGAAATATTGACATATCTTTAACGGTGGAAAGGTGATTGTTAGTGAGAACCCCATAATAATTAATTAGTGGAGGATCTATCGTGGTCCATGGCTTGAATTTAATAATTGGCTCCAGATCTGTTGTAGTACTTTTGAGTTTATAATTTATTAGATTCTGTGGTAGAACTAGAAGTACAGAACTTGGAACTCAAGAGCATTTCATCTGTTATCTATATATAGTCTGATGATGATTTGTATTATTATTTTTACATCCAATTTTTAATCCTGCAGAGTGTTCTTGGGATCATCCTTGGAGGTGGTGCTGGGACAAGGCTGTATCCGCTGACAAAGAAGAGGGCGAAGCCGGCGGTGCCGTTGGGTGCCAATTACAGGCTCATAGATATCCCGGTCAGCAACTGTCTGAACAGCAATGTGTCGAAGATCTATGTCCTGACACAGTTCAACTCCGCATCGCTCAATCGTCACCTCTCGAGGGCCTATGGAAACAACATTAGTGGTTACAAGAACGAGGGGTTTGTTGAAGTTCTTGCTGCGCAGCAGAGCCCAGAGAATCCTAACTGGTTTCAGGTATCTTGGTTAATCTGTATTAACTTGCCAAATTTTTTATAGTAGTACTGTATTAGTTTGAATTGACTCGGTAAGTGGTAATTTTTGTACTATGCAGGTACTGGATGTTTCTGCTTCTGTGTATTATTGAATGGTCTCGTTTAGCTGCAAAGATGCATGAATGCCAGTTAAAGTTTATACTTTATAGGGTACAAAGAAAAGAAGGGGATACATAATTAATATGAACATACACCCTGTTTTACGGAACAAAAGAAATATTAGGGTTAATGTACTCCTGTTGATTCACTCTTCCATATTTTCTCACATTTATAGTTAAGTGAAACTGTTCACTAGTTTAGATGTTCCAATGATTTCTTTGGAATTGCAAACTAGAGTTAACATTGATAGATGAGCTCTTAGGTTACCAACTTTCATGTTATATGGTTTCTGTATGACAATACCTTAAGGACGCTGCCTAATTTATTTTGTTTCTTTCTGTCTCAGGGTACTGCAGATGCTGTGCGACAATACTTATGGCTATTTGAGGAACACAATGTTATGGAGTTTCTCATTTTGGCTGGAGATCACCTGTACCGTATGGACTACCAAAAGTTCATTCAGGCCCACAGAGAAACAGATGCTGATATAACCGTTGCTGCGCTGCCCATGGATGAAGAACGTGCTACAGCATTTGGCCTTATGAAGATTGATGATGAAGGGAGGATCATTGAATTTGCAGAAAAGCCAAAAGGAGAGAAGTTGAAATCAATGATGGTAATTGATGAGTCATCCGTTGAGACCATATGCAACCTGATCTGTTGAAGCATACATTTCAGTGATTGTCTGCATGTTTTGATCTTGCAGGTTGACACTACCATACTTGGCCTTGATACTGAGAGGGCAAAGGAATTGCCTTACATTGCTAGTATGGGAATCTATGTTTTTAGCAAAGATGTGATGCTTAAGCTTCTCCGTCAAAATTTCCCTGCTGCAAATGACTTTGGAAGCGAGGTTATTCCTGGAGCAACAGAAATTGGAATGAGGGTACGCTATGCTCTTGAAACTTGTAGCATGTAGGGAATTTTTATCCTTCTCTCAGTTCATGCTGTAGGTTTTGTGAAGTTTGGTATGTAAACTGCAGTTACATCATTTACTGTGAAATGTTACTTCTTTACTTAATTTTTACTTTGCATGTTTGCTTATGCTGCTAATGTATTTGATAGGTGCAAGCTTACTTATATGATGGTTACTGGGAAGATATTGGTACTATAGAGGCATTCTACAATGCCAACTTGGGGATAACCAAGAAACCTGTGCCAGATTTTAGGTAAGGTTTACATTTTGCATGGTGAAAACAAGTTACTTTTAAAAGGGTGCATTTCTGCTGAATTTTCTTCCTATTTTTGAGCAAACATTATTGTGTGCAGCTTCTATGACCGTTCTGCCGCAATTTATACGCAACCTCGATACTTGCCTCCATCAAAAGTTCTTGATGCTGATGTGACAGACAGTGTTATTGGTGAAGGTTGTGTTATTAGAGTAAGTATCCTTTTCAGATGAATTATCATAGCGCTTCCTTCTATGATCTGTGGATAGTATTAGATCATAACATATTAGGACCTTGAGTTATTACTTGTTAGTCGAACATTTCTTTTTCATTGCTTCAAAACAGAGACCCTAAATTTGTTGACATGCCTTTCCCCCTTTATTTTGGCTAGCATTGCACAATCAACCATTCTGTGGTTGGACTCCGGTCCTGTATATCTGACGGCGCAGTGATAGAGGACTCTCTGCTAATGGGTGCAGACTATTATGAGGTAAAATAAAACAAAACTATACTATATTATGGTGTATTGGTGTTGTGGGAACTTAATTGTGCTTTTTGTTCAGACGGAGACGGACAAGAAAGCCCTTTCTGAGACTGGTGGCATTCCCATTGGTATTGGAAAGAATGCACACATCAGAAAAGCAATAATTGACAAGAATGCTCGTATTGGAGAAAATGTTAAGGTATTTCATATATATTTATACTTTTGGTTGTCAATCAGATGAAGTGTGCCTTCTGTATTAACTGATCAACTATTCATTACTTGAAAGAAAAGAGAGGGACAAGCATATTTGTTTGAATACAAACATGGTACTTTCTCATGCTTTTTGTTAAAGGTGGCCTTTTGCAAATGTGCATCTTGCATCACTGGTTTGAAAGCCCTTTATCATTAAAAAATTACTACTATGTCATCATACTTTTTCCCCCTAAATTATCTTTCTTTTCAAATGCTATATGTCTTTTCTTGCCATGGGTTTTTGCCTTGTTGAGTATGGATCTTTAATTATTTACTTACTAAGCACAAACTGAAAAAATCCAGGCAACCCATATGGATCGATTTACATATTGTTTCTCTCACTTTTCCAGAGATGACCAGTTGATACTGAACTGAACAAAATGATGTGCAATGTTTATTGCATTAATTAATGATCAATCTTATATGATCTGTTGCTTGTACAGATAATCAATGTCGACAATATCCAAGAAGCTTCAAGGGAGACTGATGGATACTTCATCAAAAGTGGCATTGTCACTGTGATCAAGGACGCCTTAATCCCTAGCGGAACAGTCATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030039