BGIOSGA030042

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030042| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030042, complete gene.| tag = OJ1381_...")
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Gene Name

BGIOSGA030042

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030042, complete gene.

LocusTag

OJ1381_H04.7

Ensembl Transcript ID

BGIOSGA030042-TA

Ensembl Protein ID

BGIOSGA030042-PA

Length

3026

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6736413..6739438

Sequence Coding Region

6739055..6739438,6738089..6738211),complement(6737843..6737995,6737646..6737731),complement(6737437..6737521
,6737028..6737147),complement(6736874..6736942,6736573..6736702),complement(6736413..6736489

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6736413..6739438 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6736413..6739438 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGAGCGCGGCGGCCGTCGGGCTCCTCCGGCCATGCGGCGCCACCACCGCCGCCGCCCCGCTCCAGCTCCGCAACCCTAGCCCCCGGGGCTTCGGCGTCGGAGTCGGGCAGCCGCTGCTCCCGCCGAGGGGGCTCCGCCTCTCCGCCGTGGCCCCGCGCGCGGGCATCTCCGCCCGGCGCATCGGGCTCGTGCCGGCCTCCCCGGAGCAGGAGGATGAGCGGCGGCGGGGCGCACGCGACGTGGCCGTGGCGGCGACAGCGGCGGCGGCGGGTGAGGCAGGGGCGGAGGAGGGTGGAGGGCTCGCGAAGACGCTGCAGCTCGGCGCGCTCTTCGGGCTGTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGGTTTTGAAGGTTTTTCCATACCCCATAAACATCACAAATGTCCAGTTTGCTGTCGGCACTGTCATTGCTCTGTTCATGTGGATTACCGGTATCCTTAAAAGACCAAAGATCTCCGGTGCGCAGCTTGCTGCTATCCTTCCTCTCGCTATGGTCCACACCATGGGCAATCTTTTCACGAACATGAGCCTTGGAAAGGTTGCAGTGTCATTTACACATACTATCAAGGCTATGGAGCCTTTCTTTTCAGTTCTGCTTTCAGCACTTTTCCTCGGAGAGATGCCTACTCCTTTTGTTGTATTGTCTCTTGTTCCAATTGTTGGTGGTGTGGCATTGGCATCTCTTACTGAAGCTTCATTTAACTGGGCTGGATTTTGGAGTGCAATGGCCTCAAATGTCACCTTCCAGTCAAGGAATGTGTTGAGCAAGAAGCTTATGGTGAAGAAGGAGGAATCTCTGGACAACATTACCCTCTTCTCAATCATTACAGTGATGTCATTCTTCCTCTTGGCCCCAGTAACCTTGCTAACAGAGGGTGTCAAAGTCACTCCGACAGTTCTGCAGTCTGCTGGTCTGAACTTAAAACAGATATACACAAGGTCACTGATTGCTGCGTTCTGTTTCCATGCATACCAACAGGTGTCGTACATGATCCTGGCAAGAGTGTCCCCTGTTACTCACTCGGTGGGTAACTGTGTCAAGCGAGTGGTGGTCATTGTGACATCTGTTCTGTTCTTCCGCACCCCTGTTTCGCCTATCAACTCTCTGGGAACCGGAGTCGCTCTTGCCGGAGTTTTCCTGTACTCACAATTGAAGCGGCTTAAACCCAAGCCCAAGACTGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MQSAAAVGLLRPCGATTAAAPLQLRNPSPRGFGVGVGQPLLPPRGLRLSAVAPRAGISARRIGLVPASPEQEDERRRGARDVAVAATAAAAGEAGAEEGGGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNITLFSIITVMSFFLLAPVTLLTEGVKVTPTVLQSAGLNLKQIYTRSLIAAFCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTGVALAGVFLYSQLKRLKPKPKTA</aaseq>

Gene Sequence

<dnaseqindica>1..384#1228..1350#1444..1596#1708..1793#1918..2002#2292..2411#2497..2565#2737..2866#2950..3026#ATGCAGAGCGCGGCGGCCGTCGGGCTCCTCCGGCCATGCGGCGCCACCACCGCCGCCGCCCCGCTCCAGCTCCGCAACCCTAGCCCCCGGGGCTTCGGCGTCGGAGTCGGGCAGCCGCTGCTCCCGCCGAGGGGGCTCCGCCTCTCCGCCGTGGCCCCGCGCGCGGGCATCTCCGCCCGGCGCATCGGGCTCGTGCCGGCCTCCCCGGAGCAGGAGGATGAGCGGCGGCGGGGCGCACGCGACGTGGCCGTGGCGGCGACAGCGGCGGCGGCGGGTGAGGCAGGGGCGGAGGAGGGTGGAGGGCTCGCGAAGACGCTGCAGCTCGGCGCGCTCTTCGGGCTGTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGGTGAGGCGGCTTTAACTTTGATCCATTGCCGTCGCCAATTTGGCGGAGATTTGGGGGAGACTAGGATGTTTCATTTGGGATTTATTACATGTGATTCTGTTAGTGGCGAATGGTTCGCTGATGGCAATCTGATCTTGGATCGGGCATTCGCCTTTTAGATTCAGCAAAGATCTACTCGCTCCGTTGAGATTGTTGAGCAAAAGAGGGAACTATTTTGAAATTGATTTTATTTGTCTTGTGAATCACTTCTAATTATAACCTTTTTTGCCTCCATATGCTGGTATATGTCGTTTTCTGTAAATGTTTCTAACCCACTTACTGAATGGGTGCAAGAATTTGCTCAAGCTCGTCTAGATCTTGGATTAGTACAAACTCAAAATGTATATTGTGGAAAGAAGAGCGATTTAGTTTATTTCGTTGGGCTTTTAGAGATGTTCCCCCACGTTACACCTTTTCTATCAAACTTTTGTCACAACTTTCTAAAAGGTACATTTGTGGATAGTTTATGTTTGTATCTGGTATAAGATGTCGAACGGGTAATATTGCTAAAATCATGTCTTCTAGTGAGTGCAGTAGACAATTTCCCATGTCTTCTGGTAGAAATATAGAATATAGAAGGAAAAAGAACAAACATTTCTTCAAAGTTGTCCAGACTCATATGTATCCATGTCTTATAGTGAGTATATCCAATGTTCTACCAAAACAAATTGTGCTAGGGATGGAATTTTGTTTTCGTTCATTATATATGGTGTCACTTATGGTTAATCTGTTGAAATTTCTTGATCTCCTCATTGGCTTCATGTAGATAAAACAACTTTCCTTTATTGTTCCTATGTGTGACAGGTTTTGAAGGTTTTTCCATACCCCATAAACATCACAAATGTCCAGTTTGCTGTCGGCACTGTCATTGCTCTGTTCATGTGGATTACCGGTATCCTTAAAAGACCAAAGATCTCCGGTGCGCAGGTAATTATATTTCTCTATAAGATACATCGTGACAACATTCGATACACATGTATTGCACTATGAAGCCAACTATTGTAACTGTCCTTATTTCAGCTTGCTGCTATCCTTCCTCTCGCTATGGTCCACACCATGGGCAATCTTTTCACGAACATGAGCCTTGGAAAGGTTGCAGTGTCATTTACACATACTATCAAGGCTATGGAGCCTTTCTTTTCAGTTCTGCTTTCAGCACTTTTCCTCGGAGAGGTAATTTTTTAATGTTCTGCACTGGTGCCCAGTGATAACTATGCAACCGCATATAATCTTAGAAAAACCATCTGTTTCTTGGTTTGGTTCTCATACATAATCACTTTGCAGATGCCTACTCCTTTTGTTGTATTGTCTCTTGTTCCAATTGTTGGTGGTGTGGCATTGGCATCTCTTACTGAAGCTTCATTTAACTGGTAAGGGATATAGCTAGCTATTTTTGTCTTCGCTGTGGAAACTGCAAATATAACATAAGCCTGCTGATAGCAGAGCTAACAAAGTGCTATATGCTTGATTCGTCTGTAATTTATATGATATCAGGGCTGGATTTTGGAGTGCAATGGCCTCAAATGTCACCTTCCAGTCAAGGAATGTGTTGAGCAAGAAGCTTATGGTGAAGAAGGAGGTAACTGAATAATTAGAGTGCGGTCATCATAGATATTGGCAACTGAATTGCAGAATTAGTACAAGTGTGTGTTTCTCTTGAATAGTCTGCTTTAGTAATATTCATCAGTTATTTTAGGATGTGTCACTTCATAATGTTCTGTTTCAAGATAAAATTTGTATTTTAACAGAGCTTTTTATTTATGTCCACACTTGCCTATCTGTGGCTTTTTCCTTGAACCTCTATTGTTTGTCACCATGGCTCTTACATAACTTAATTCTAATGATCTTCTTTCCCAATTTCTGATCAGGAATCTCTGGACAACATTACCCTCTTCTCAATCATTACAGTGATGTCATTCTTCCTCTTGGCCCCAGTAACCTTGCTAACAGAGGGTGTCAAAGTCACTCCGACAGTTCTGCAGTCTGCTGTGAGCACCTTGATATTTAATTATAGACAAATTGCTCCTTACATATTGTTTGGTGCAATTTTTGACTATTTTCTTTCTTATGTAGGGTCTGAACTTAAAACAGATATACACAAGGTCACTGATTGCTGCGTTCTGTTTCCATGCATACCAACAGGTCAGCCATCTAATTGATTTTCTAAAAATAGCTTGGCCTTTTGAAATCTCTGGATGCGCTTGTTCATTTCAGATAGATTCTATGTGCTGAATACATTACAGTTGTTACATTGATGAATCATCATACATGTGCAAAGCCCATGTCTTGCTGATCTCACATAATTTCTTGAAGGTGTCGTACATGATCCTGGCAAGAGTGTCCCCTGTTACTCACTCGGTGGGTAACTGTGTCAAGCGAGTGGTGGTCATTGTGACATCTGTTCTGTTCTTCCGCACCCCTGTTTCGCCTATCAACTCTCTGGGTAAGAATCATTTTCTGTTCACTTCTGTATCAAATTGACTGCATCGCACCTCCTTTACATATCCAAATATTTGCGCCCTGCAGGAACCGGAGTCGCTCTTGCCGGAGTTTTCCTGTACTCACAATTGAAGCGGCTTAAACCCAAGCCCAAGACTGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030042