BGIOSGA030044

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030044| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030044, complete gene.| tag = OsI_307...")
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Gene Name

BGIOSGA030044

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030044, complete gene.

LocusTag

OsI_30771

Ensembl Transcript ID

BGIOSGA030044-TA

Ensembl Protein ID

BGIOSGA030044-PA

Length

5783

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6659436..6665218

Sequence Coding Region

6665122..6665218,6665039..6665074),complement(6664764..6664986,6664441..6664633),complement(6664252..6664332
,6663834..6664075),complement(6663646..6663721,6663449..6663554),complement(6662784..6663248
,6662175..6662552),complement(6660930..6661489,6659436..6660215

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6659436..6665218 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6659436..6665218 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCAGGAGTACCAGACAATGCCTTCTTCTGCTCACGACAAGAGGTACTCAGGACTGTCGAATGGTGGTGACAAAGAACAATTGCCATCTCAAGGTGTTTGTGTCACTCTTTCATGTTTAACGGTTGGAAAATCAGAAGTTCCTTTGAGTACTAGATTTGATGGGAATGCAATGCAAGTAGATGGACTCCTAAAAAATGTTTCTCCCACAACTAAGATTGTGGTGAAACCAAATGAGGAGTTGAAGTCACCGTTCTTGGTAAAGCGCCACCTATTTCTTAAGAGGCCTGATCCTATTATACTAGACGAATTGTACAGCTTGACTACAAAAGTAACCGATGAAGAGTCCAGACAGTCTGTTTGGGTATCAGGCAACCTGCCGATCAATTTAAAGCTTGTAGATATCCAGGAAACAATAAAACCTGAAGGAGTCATGGGTATAAATTGCATGGACTTGGCTGTTAGAATTATGGCAAGACAGGATGCTGAAATTTTTAAAAACACAAAATGTCTAGGTTGGAGGCATTATGTTGATTCAAATTGGAAGCAATATATCAATGATCCCAACAATCTGAGGAACGAGTATTCCCGTTTGTCTACTATGTATGATCCTTCAGGTTCACATCTGGTATTAATCCCTGTATCATCTGATGGCCACTGGACTCTATATGCTTTCAACATGAATGATAAGAAGCTCTGCATTCTGGATTCTCGACGAGATACCAGTGAAGGCGGTGATCAGGATCCAGTGAAGCGTCATGAGAAAATCCGAAAAGAAGTCTGCCATGCTCTTAACGAAACCATGGATGTTGATTTCAATTTTCTCTCTTGGAAGCATGAGTTTCCCAAAGTGCCTAGGCAACAGAACAGTTGTGACTGTGGATTCTTTGTATTCAATTTTATGCGATTATGGGATGGTCATCGACTGATTCGGTGGTTTTCAACTGAAACAAAGGAGTTGCGGAAGAACTTTCTAGCATACATACTCTCCAGTTTGGATGATCATTCAGTCCTGCCTACTAATGTCTCTGAGTTGATCAAAAAGCTCCCTGGGGAAACAATGATGAATGTTGAGCTATTAGAAGCTGCACGGGAAGGCAACGCAAATGCATTTTGTGAACTTGTTATAGATCCTGCAAGAAGTATTAATCATGAGCCCTTCAGATCTGCCTCCTGTTCTTGTCTTCTTTTTCGGAGCACATCATCTGGCAGCTATTGTCTCTGTTTTGAGTGCACATCCTCACGCAATTCCGATCAAGAAAAGAGTCCAAACAAGCATAATGCATTAACACGATCAGATGCACCATCAACATTTACGAGAGATACAAGGGACATGCTACATGCTATTCAGGGTGTAACGGTTGAAGGTGACGGGGTGCTCCACATCGCTGCAAGCTTTGGTGTTTTGGAACCTGTGAAAACCGTCTTGGAAGCGCAGAATGGAGCTTTCGCAACGGCGCTTCTGCAAGCAGAGAACAACAAAGGAGACAGGCCCCTGCACTGCGCAGCCACCACAGGGAGTATAGTTACTGTCAAACTCATCGTTGATGAAGCTGAGAAAATTATGCGGGCCCAATCCGATACCTTTGCCTGGTTTCTGCGTGCGAAAAATCTCGATGGCCAGACGTGCTTGCACGAGGCTGTGCGCCACGGTCACGAAGATGTTGTGAAATATTTGGTTTCGAAAGATGCAGATTTGGGGGATGTCCCGTTGCCGCTGGTGCAGATAGTGGACAACGAGGGCACTTCTCCGCTCTACTTGGCGACCACATTACGCAGAGACAGCATTGTTAAGGTGCTCACAGAAGCAGCGCCATCAGGCATGCCTAGAGCCGCGTCCTATTCTGGGCCTGCAGGGAAAACAGCTTTACATGCTGCTGTTCTCTTCAGTGCAGAACTGAGTAGAACACTGGTGAATTGGAACCATAGTCTCATTAAGATCCGGGATGAATCTGGGAGCACCCCGCTTCACTATTTGGCAGACGGGAAGTATACTACTGAACCCAGTTGCATTTCTGTTACTGAACTTCTCCTTAAGAAGGATCCATCGTCAGGCTACTGTGAAGATTCAGAGGGCTCATTGCCCATACACATTGCTGCTGCAAATGGCACGCTTGGCATCATTGATCAGCTGATAAAATTGTGTCCTGGCTGTGAGTCATCATGCAATGCTTCTGGCCAGACAATCCTCCACATCGCTGTCCAAACGGAAAGCCATGATGTGGTGCGATTTGTTTGTTCGAATGAAATGTTCAAAATGGTTCTGAATATGAAGGATTACGATGGGAATACAGCACTCCATTTGGCTGTACAGAAGGGACATAACAAGACCTTTGGCATTTTGATGGGATGCAAGAATGTCTCTTTAAGTATCAGAAACAGAAATGGGTATACGCCTCTTGATCATGCCGTACTGAACAAAACAAGCGGACTGACGTATGCCACATATTGGCCAGGTCACCAGCGATGGGTATGCAATAGTTTGCTCGCTGCTGGAGCTGATTTTGGTACTTTCCGTGCGGACCATTTGTCCAGCAAGATCCCAGAACAAGCCAAGGCTGACAGGGAAGCATTCTCCGACACACTGAGCAAATCTGCCGCGGTCATGGCCACATGCGCGGCTCTGCTTTTCAATGCGGCGCTTAACATCTTTCTGAATGTGCAAGCCATCTACCACAACAATAACACCAGCACCAACAACAACAATGCAACTCAAGGAAGCGATCAGCTCAAGCAAATTCAGAAAGTTAAGAAACTCAGTGGAGACTCACTGAGCATCTCTGCGTGTGCCATCCTTTTATTTGCGATTGCTGGATTTCCCATCTTGCCCGGTGTCATAGGACGCACCTTTGCTCTTATCTTGGGACTAGGGGTGCTCATTGGGTCGTCCATGATTAGCCTGCAGGCGTTAGCAGCACGGCTTGATCTAGCCAAGGTTTATGGCACAGGAATCGGTGCCTTCTGCGTTATATTTTCGCTGTTGTGCGTAACGCTGTGCACCAACCTTTTGCGGAAGATAGTGCAGCACGCGCGTCCGCTGTGGGCTAGGTGTGGTGCCCGTGGATTCTTCCGTAGCATTCTGAATGTGCGCAGAGCTCAAAACTACTCTGCCATCCCGTTGTTGCAGGTTTGTGCCTTCATCGAGGTCTTACTGCTGACGTGTCTTGTTATGAGCTCCAGTATTGAAATTGTAACAAAAAATTTTCCAATATCGCTACAACTAGTTAGGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAQEYQTMPSSAHDKRYSGLSNGGDKEQLPSQGVCVTLSCLTVGKSEVPLSTRFDGNAMQVDGLLKNVSPTTKIVVKPNEELKSPFLVKRHLFLKRPDPIILDELYSLTTKVTDEESRQSVWVSGNLPINLKLVDIQETIKPEGVMGINCMDLAVRIMARQDAEIFKNTKCLGWRHYVDSNWKQYINDPNNLRNEYSRLSTMYDPSGSHLVLIPVSSDGHWTLYAFNMNDKKLCILDSRRDTSEGGDQDPVKRHEKIRKEVCHALNETMDVDFNFLSWKHEFPKVPRQQNSCDCGFFVFNFMRLWDGHRLIRWFSTETKELRKNFLAYILSSLDDHSVLPTNVSELIKKLPGETMMNVELLEAAREGNANAFCELVIDPARSINHEPFRSASCSCLLFRSTSSGSYCLCFECTSSRNSDQEKSPNKHNALTRSDAPSTFTRDTRDMLHAIQGVTVEGDGVLHIAASFGVLEPVKTVLEAQNGAFATALLQAENNKGDRPLHCAATTGSIVTVKLIVDEAEKIMRAQSDTFAWFLRAKNLDGQTCLHEAVRHGHEDVVKYLVSKDADLGDVPLPLVQIVDNEGTSPLYLATTLRRDSIVKVLTEAAPSGMPRAASYSGPAGKTALHAAVLFSAELSRTLVNWNHSLIKIRDESGSTPLHYLADGKYTTEPSCISVTELLLKKDPSSGYCEDSEGSLPIHIAAANGTLGIIDQLIKLCPGCESSCNASGQTILHIAVQTESHDVVRFVCSNEMFKMVLNMKDYDGNTALHLAVQKGHNKTFGILMGCKNVSLSIRNRNGYTPLDHAVLNKTSGLTYATYWPGHQRWVCNSLLAAGADFGTFRADHLSSKIPEQAKADREAFSDTLSKSAAVMATCAALLFNAALNIFLNVQAIYHNNNTSTNNNNATQGSDQLKQIQKVKKLSGDSLSISACAILLFAIAGFPILPGVIGRTFALILGLGVLIGSSMISLQALAARLDLAKVYGTGIGAFCVIFSLLCVTLCTNLLRKIVQHARPLWARCGARGFFRSILNVRRAQNYSAIPLLQVCAFIEVLLLTCLVMSSSIEIVTKNFPISLQLVRR</aaseq>

Gene Sequence

<dnaseqindica>1..97#145..180#233..455#586..778#887..967#1144..1385#1498..1573#1665..1770#1971..2435#2667..3044#3730..4289#5004..5783#ATGGCTCAGGAGTACCAGACAATGCCTTCTTCTGCTCACGACAAGAGGTACTCAGGACTGTCGAATGGTGGTGACAAAGAACAATTGCCATCTCAAGGTATTTCAGTTCCCCTTATGGATCTAACTAGTGTTTTGTTTGTTCAGGTGTTTGTGTCACTCTTTCATGTTTAACGGTTGGAAGTGAGTTATTATACTTGTTTTCCAATGTACTTCCTTTGTTTGACTTGTATAGAATCAGAAGTTCCTTTGAGTACTAGATTTGATGGGAATGCAATGCAAGTAGATGGACTCCTAAAAAATGTTTCTCCCACAACTAAGATTGTGGTGAAACCAAATGAGGAGTTGAAGTCACCGTTCTTGGTAAAGCGCCACCTATTTCTTAAGAGGCCTGATCCTATTATACTAGACGAATTGTACAGCTTGACTACAAAAGTAACCGATGAAGAGTCCAGACAGTAAGTGTAATTTGCGTCCTTTAAACATCTACTACATCTGTTTCAAATTACTTGTCGTTTTAGCTTTGTCATAAGTCAATCAGTTTTGTTACTGCAGTCATGACCAGCCTTATTATTGATTGAATTGCAGGTCTGTTTGGGTATCAGGCAACCTGCCGATCAATTTAAAGCTTGTAGATATCCAGGAAACAATAAAACCTGAAGGAGTCATGGGTATAAATTGCATGGACTTGGCTGTTAGAATTATGGCAAGACAGGATGCTGAAATTTTTAAAAACACAAAATGTCTAGGTTGGAGGCATTATGTTGATTCAAATTGGAAGGTAAGTTTGCGTGAGTGCGCCTTGGGATGTTGTTGGCGGCATATAATTCCTAGTTCTACTCTTCTCCTAGTGTCATAATAACAACTATTTTTGTTCCTTGTTCCACAGCAATATATCAATGATCCCAACAATCTGAGGAACGAGTATTCCCGTTTGTCTACTATGTATGATCCTTCAGGTTCACATCTGGTATGATCCTTTTCTATTTCTATCCAAATTGGGTAGAACTGAAAAAACTCTCGCTAATCTCTTGTCATCCAATTGGTCTGTCGATCAAATTTAAGTTACAAAATGCAACCAGGAAATTACCAAATTGAATCTGAACATTGTTTTTTTTTTGCTGAAATGTGTGTATATATATATAGGTATTAATCCCTGTATCATCTGATGGCCACTGGACTCTATATGCTTTCAACATGAATGATAAGAAGCTCTGCATTCTGGATTCTCGACGAGATACCAGTGAAGGCGGTGATCAGGATCCAGTGAAGCGTCATGAGAAAATCCGAAAAGAAGTCTGCCATGCTCTTAACGAAACCATGGATGTTGATTTCAATTTTCTCTCTTGGAAGCATGAGTTTCCCAAAGTGCCTAGGCAACAGAACAGGTGTGACTCTTAACACCCAGCTTTGCTTAATCTTCTTCCCGTCTTTATTATGGGTATATGTTTTACTGCATGATAAGTGATCAACTCATTTTTCCCTATGATTTATTTCTAGTTGTGACTGTGGATTCTTTGTATTCAATTTTATGCGATTATGGGATGGTCATCGACTGATTCGGTGGTTTTCAACTGTAAGAAATAATTCCTGGAGAGTTAATTTTGATTGGAATACATATTCAATATATTATCGTCATTAATTTTGTATATGCATCATCTTGTTAGGAAACAAAGGAGTTGCGGAAGAACTTTCTAGCATACATACTCTCCAGTTTGGATGATCATTCAGTCCTGCCTACTAATGTCTCTGAGTTGATCAAAAAGCTCCCTGGTTAGACACATCAGAGTTTGCATTTTCTTTTGTGTTTTGTTACAGGACACATGAACTTTTAAATACATAGTTTTCCGACTATATATGCCAATAAGACCTTGTTTGGGATATGATTGGCCCAGCTCTAATGATATAGTTTTCGTCTTGCCTAAACAGAAACTTAATTATCTGATTGATCTTGTTGGTGTTTCTTTGTTTAGGGGAAACAATGATGAATGTTGAGCTATTAGAAGCTGCACGGGAAGGCAACGCAAATGCATTTTGTGAACTTGTTATAGATCCTGCAAGAAGTATTAATCATGAGCCCTTCAGATCTGCCTCCTGTTCTTGTCTTCTTTTTCGGAGCACATCATCTGGCAGCTATTGTCTCTGTTTTGAGTGCACATCCTCACGCAATTCCGATCAAGAAAAGAGTCCAAACAAGCATAATGCATTAACACGATCAGATGCACCATCAACATTTACGAGAGATACAAGGGACATGCTACATGCTATTCAGGGTGTAACGGTTGAAGGTGACGGGGTGCTCCACATCGCTGCAAGCTTTGGTGTTTTGGAACCTGTGAAAACCGTCTTGGAAGCGCAGAATGGAGCTTTCGCAACGGCGCTTCTGCAAGCAGAGAACAACAAAGGAGACAGGCCCCTGCACTGCGCAGCCACCACAGGTAGACTGTAACTATATTGTTTCCGCAAACTAATAATAATAATAATAATAATAGTAATGACTTTTACCGTTTTGGTTTCTAAAATTTAGTTTTTCTAAATTTTATTAGCGTCGCATTAAAGTTAACACTAAATAGTTAAATTCATAAATATGAAAATTGTCTGACAGATTATAATTGTTTCCGTAAAAATAATGATAACTTTTCCAACCATCTCCGACCGTTTTCATCCAGGGAGTATAGTTACTGTCAAACTCATCGTTGATGAAGCTGAGAAAATTATGCGGGCCCAATCCGATACCTTTGCCTGGTTTCTGCGTGCGAAAAATCTCGATGGCCAGACGTGCTTGCACGAGGCTGTGCGCCACGGTCACGAAGATGTTGTGAAATATTTGGTTTCGAAAGATGCAGATTTGGGGGATGTCCCGTTGCCGCTGGTGCAGATAGTGGACAACGAGGGCACTTCTCCGCTCTACTTGGCGACCACATTACGCAGAGACAGCATTGTTAAGGTGCTCACAGAAGCAGCGCCATCAGGCATGCCTAGAGCCGCGTCCTATTCTGGGCCTGCAGGGAAAACAGCTTTACATGCTGCTGTTCTCTTCAGTGCAGGTACAAACTCAGTCTTATGTTCGTTGCCAAGTTCTGCAAGGTTTATTACATGACATCTCTCAACGTTTAGTAGGCTAATATATCTTACATTTTCTGCAAATCATGCACAATTTACTCCTACGGAGTTTCCTCCTTCATGAACAATTTATCCCTTAGTTTTTAAATATATGACATTATTAACTTTACATTGGACCATTTATCTCATTCAAAAAATAAGTACAGATATAAAAAAAAATATAAGTCATATTTAAAGTATCTTCAATGATGAAACAAATCATAACAAAACAAATGATACTTACATAGTTTTTCTAATAATACAAATGGTCAAATGCAATTAATTGCACTAGTATCGAAGACAAGACTTAATTAATTGTACTAGTATGAAAGAAAAAAACCTTTACTAAAATAGACTAAATAAACATGCGATTTGGTAATGTATAAATGCTACTGGCCATTCAAGAGCGCATCATTTCTTCGGAATCTATGATTCTTCTATAGAATGAAATGAGTGCCCAGCTTTGTATGCCTTCTTTTTTCTTTCCCAACTGCCCTTGTTTAATCTGTTTTTATTTCTTGTTATGACTTTTACAGTTTTTTTCACTTCTAGTACAATCATGCATTTGACATAGCAAGAGACATATGCAACGGAAAGACAGTTAACTAATATTGCAAATCTCAATTGCAGAACTGAGTAGAACACTGGTGAATTGGAACCATAGTCTCATTAAGATCCGGGATGAATCTGGGAGCACCCCGCTTCACTATTTGGCAGACGGGAAGTATACTACTGAACCCAGTTGCATTTCTGTTACTGAACTTCTCCTTAAGAAGGATCCATCGTCAGGCTACTGTGAAGATTCAGAGGGCTCATTGCCCATACACATTGCTGCTGCAAATGGCACGCTTGGCATCATTGATCAGCTGATAAAATTGTGTCCTGGCTGTGAGTCATCATGCAATGCTTCTGGCCAGACAATCCTCCACATCGCTGTCCAAACGGAAAGCCATGATGTGGTGCGATTTGTTTGTTCGAATGAAATGTTCAAAATGGTTCTGAATATGAAGGATTACGATGGGAATACAGCACTCCATTTGGCTGTACAGAAGGGACATAACAAGACCTTTGGCATTTTGATGGGATGCAAGAATGTCTCTTTAAGTATCAGAAACAGAAATGGGTATACGCCTCTTGATCATGCCGTACTGAACAAAACAAGCGGACTGACGTATGCCACATATTGGCCAGTATGTCCTATTAGCACCCTCCCTTTCTCTTATTTTGCATTTTTACTCGTATTCTTTTTCTGAAATGAGATTTGTTTTTAAACATATTCCATTTCTGCAAAGTTCACTACAAATTATGTACCTTGGGCAACTAGAACAACGAAAAATTGTTGTAGAATTTCCCTAATTTGGTTGGTGTTTCACATATTCTCTACAAAGTAATTCAAAGGTACTTCCTCTTGGCATTAATATTTGATGTATAGAATAAAATTCAGTCAATCTTTAAACTCTTAAACCATGATCAATTGCTCAAATGCTTAGTTTACAAAAGTAGCATCTGTAAATTTACCTCTCAAAGTACACTATGTTGTAAACTTATTAGATTTTATAAACATATTCTACTAATGTAAGAATGTATGGTTAAAGTTTCAAAAGTATGATTGAATCTTGTCATGAATGTCAAATATGTAAGACCAGAAGTAATCTTAGGTGTGATGACATGGATATGTATGTTAACAACTAATTACACCATATGGTAGGAATTACTATTATTTTTCCCGTAATTATATCGAAGATGCACACGCATCACACCGCTATGCATGTACATCATATCGTCTATGAATTATGAAATATATCTAGAAGCAGGGTAATGTGAAAAATATAGATTAATTCATTAATAGGGGGGAACATGGATTTTCATGTCTTATGAAGTTACTTTCCATGACATTTCTGAAGGGTCACCAGCGATGGGTATGCAATAGTTTGCTCGCTGCTGGAGCTGATTTTGGTACTTTCCGTGCGGACCATTTGTCCAGCAAGATCCCAGAACAAGCCAAGGCTGACAGGGAAGCATTCTCCGACACACTGAGCAAATCTGCCGCGGTCATGGCCACATGCGCGGCTCTGCTTTTCAATGCGGCGCTTAACATCTTTCTGAATGTGCAAGCCATCTACCACAACAATAACACCAGCACCAACAACAACAATGCAACTCAAGGAAGCGATCAGCTCAAGCAAATTCAGAAAGTTAAGAAACTCAGTGGAGACTCACTGAGCATCTCTGCGTGTGCCATCCTTTTATTTGCGATTGCTGGATTTCCCATCTTGCCCGGTGTCATAGGACGCACCTTTGCTCTTATCTTGGGACTAGGGGTGCTCATTGGGTCGTCCATGATTAGCCTGCAGGCGTTAGCAGCACGGCTTGATCTAGCCAAGGTTTATGGCACAGGAATCGGTGCCTTCTGCGTTATATTTTCGCTGTTGTGCGTAACGCTGTGCACCAACCTTTTGCGGAAGATAGTGCAGCACGCGCGTCCGCTGTGGGCTAGGTGTGGTGCCCGTGGATTCTTCCGTAGCATTCTGAATGTGCGCAGAGCTCAAAACTACTCTGCCATCCCGTTGTTGCAGGTTTGTGCCTTCATCGAGGTCTTACTGCTGACGTGTCTTGTTATGAGCTCCAGTATTGAAATTGTAACAAAAAATTTTCCAATATCGCTACAACTAGTTAGGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030044

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030044&oldid=29248"